RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 STX1AQ16623 288 aa14.54□□□□□ -0.08
VPS33B-206ENST00000557358 PREPLQ4J6C6 727 aaPredicted RBP14.54□□□□□ -0.08
VPS33B-206ENST00000557358 C10orf120Q5SQS8 335 aa14.54□□□□□ -0.08
VPS33B-206ENST00000557358 TRIM68Q6AZZ1 485 aa14.54□□□□□ -0.08
VPS33B-206ENST00000557358 SMYD5Q6GMV2 418 aa14.54□□□□□ -0.08
VPS33B-206ENST00000557358 TRIM65Q6PJ69 517 aa14.54□□□□□ -0.08
VPS33B-206ENST00000557358 LCLAT1Q6UWP7 414 aa14.54□□□□□ -0.08
VPS33B-206ENST00000557358 PIGZQ86VD9 579 aa14.54□□□□□ -0.08
VPS33B-206ENST00000557358 LMO3Q8TAP4 145 aa14.54□□□□□ -0.08
VPS33B-206ENST00000557358 ENOX1Q8TC92 643 aaKnown RBP14.54□□□□□ -0.08
VPS33B-206ENST00000557358 GOLGA1Q92805 767 aa14.54□□□□□ -0.08
VPS33B-206ENST00000557358 TUBGCP2Q9BSJ2 902 aa14.54□□□□□ -0.08
VPS33B-206ENST00000557358 RNF38Q9H0F5 515 aa14.54□□□□□ -0.08
VPS33B-206ENST00000557358 ECT2Q9H8V3 914 aa14.54□□□□□ -0.08
VPS33B-206ENST00000557358 TMEM63CQ9P1W3 806 aa14.54□□□□□ -0.08
VPS33B-206ENST00000557358 DNMT3LQ9UJW3 386 aa14.54□□□□□ -0.08
VPS33B-206ENST00000557358 STRIP2Q9ULQ0 834 aa14.54□□□□□ -0.08
VPS33B-206ENST00000557358 MTF2Q9Y483 593 aaPredicted RBP14.54□□□□□ -0.08
VPS33B-206ENST00000557358 WNT6Q9Y6F9 365 aa14.54□□□□□ -0.08
VPS33B-206ENST00000557358 PATJQ8NI35 1801 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 KCNJ18B7U540 433 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 M0QYV0 167 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 CYP26A1O43174 497 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 RARGP13631 454 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 ARSAP15289 507 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 DRD1P21728 446 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 USP8P40818 1118 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 PLA2G4AP47712 749 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 SOX9P48436 509 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 CCR3P51677 355 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 TKTL1P51854 596 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 KCNJ12Q14500 433 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 PON2Q15165 354 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 CNGA2Q16280 664 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 FBXO43Q4G163 708 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 VWA3BQ502W6 1294 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 BTBD8Q5XKL5 378 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 KLHDC10Q6PID8 442 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 NUDT18Q6ZVK8 323 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 CHRDQ9H2X0 955 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 NDST4Q9H3R1 872 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 CCSER2Q9H7U1 834 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 CYLDQ9NQC7 956 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 HPS4Q9NQG7 708 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 CLIC5Q9NZA1 410 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 DLGAP2Q9P1A6 1054 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 APEX2Q9UBZ4 518 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 FBXO4Q9UKT5 387 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 NFE2L3Q9Y4A8 694 aa14.53□□□□□ -0.08
VPS33B-206ENST00000557358 CACNA1IQ9P0X4 2223 aa14.52□□□□□ -0.08
VPS33B-206ENST00000557358 A0A1W2PQH9 124 aa14.52□□□□□ -0.09
VPS33B-206ENST00000557358 HHLA1C9JL84 531 aa14.52□□□□□ -0.09
VPS33B-206ENST00000557358 O00370 1275 aa14.52□□□□□ -0.09
VPS33B-206ENST00000557358 ATG13O75143 517 aa14.52□□□□□ -0.09
VPS33B-206ENST00000557358 ZBED1O96006 694 aa14.52□□□□□ -0.09
VPS33B-206ENST00000557358 NRLP54845 237 aa14.52□□□□□ -0.09
VPS33B-206ENST00000557358 COG7P83436 770 aa14.52□□□□□ -0.09
VPS33B-206ENST00000557358 PDE4CQ08493 712 aa14.52□□□□□ -0.09
VPS33B-206ENST00000557358 EML3Q32P44 896 aa14.52□□□□□ -0.09
VPS33B-206ENST00000557358 FKBP15Q5T1M5 1219 aa14.52□□□□□ -0.09
VPS33B-206ENST00000557358 RBM43Q6ZSC3 357 aaKnown RBP14.52□□□□□ -0.09
VPS33B-206ENST00000557358 GPRIN1Q7Z2K8 1008 aa14.52□□□□□ -0.09
VPS33B-206ENST00000557358 ARHGEF19Q8IW93 802 aa14.52□□□□□ -0.09
VPS33B-206ENST00000557358 UBR7Q8N806 425 aa14.52□□□□□ -0.09
VPS33B-206ENST00000557358 UBA3Q8TBC4 463 aa14.52□□□□□ -0.09
VPS33B-206ENST00000557358 RNF139Q8WU17 664 aa14.52□□□□□ -0.09
VPS33B-206ENST00000557358 P2RY13Q9BPV8 354 aa14.52□□□□□ -0.09
VPS33B-206ENST00000557358 OLA1Q9NTK5 396 aaKnown RBP14.52□□□□□ -0.09
VPS33B-206ENST00000557358 ZNF510Q9Y2H8 683 aa14.52□□□□□ -0.09
VPS33B-206ENST00000557358 USP3Q9Y6I4 520 aa14.52□□□□□ -0.09
VPS33B-206ENST00000557358 KIF26AQ9ULI4 1882 aaPredicted RBP14.52□□□□□ -0.09
VPS33B-206ENST00000557358 TRDMT1O14717 391 aaKnown RBP14.51□□□□□ -0.09
VPS33B-206ENST00000557358 SART1O43290 800 aaKnown RBP14.51□□□□□ -0.09
VPS33B-206ENST00000557358 IRF1P10914 325 aa14.51□□□□□ -0.09
VPS33B-206ENST00000557358 CDK11BP21127 795 aaKnown RBP14.51□□□□□ -0.09
VPS33B-206ENST00000557358 BRD2P25440 801 aaKnown RBP14.51□□□□□ -0.09
VPS33B-206ENST00000557358 GJA4P35212 333 aa14.51□□□□□ -0.09
VPS33B-206ENST00000557358 SNX16P57768 344 aa14.51□□□□□ -0.09
VPS33B-206ENST00000557358 BPIFB4P59827 614 aa14.51□□□□□ -0.09
VPS33B-206ENST00000557358 YWHAGP61981 247 aaKnown RBP eCLIP14.51□□□□□ -0.09
VPS33B-206ENST00000557358 PTK2Q05397 1052 aa14.51□□□□□ -0.09
VPS33B-206ENST00000557358 ARHGAP44Q17R89 818 aa14.51□□□□□ -0.09
VPS33B-206ENST00000557358 HSP90AA4PQ58FG1 418 aa14.51□□□□□ -0.09
VPS33B-206ENST00000557358 TCP11X2Q5H9J9 407 aa14.51□□□□□ -0.09
VPS33B-206ENST00000557358 TTC30AQ86WT1 665 aa14.51□□□□□ -0.09
VPS33B-206ENST00000557358 IRF2BP1Q8IU81 584 aa14.51□□□□□ -0.09
VPS33B-206ENST00000557358 ZNF276Q8N554 614 aa14.51□□□□□ -0.09
VPS33B-206ENST00000557358 ATRIPQ8WXE1 791 aa14.51□□□□□ -0.09
VPS33B-206ENST00000557358 KCTD13Q8WZ19 329 aa14.51□□□□□ -0.09
VPS33B-206ENST00000557358 CD101Q93033 1021 aa14.51□□□□□ -0.09
VPS33B-206ENST00000557358 HSFY1Q96LI6 401 aa14.51□□□□□ -0.09
VPS33B-206ENST00000557358 TRIM62Q9BVG3 475 aa14.51□□□□□ -0.09
VPS33B-206ENST00000557358 FAM126AQ9BYI3 521 aaPredicted RBP14.51□□□□□ -0.09
VPS33B-206ENST00000557358 DCLK3Q9C098 648 aa14.51□□□□□ -0.09
VPS33B-206ENST00000557358 SEMA4AQ9H3S1 761 aa14.51□□□□□ -0.09
VPS33B-206ENST00000557358 CNGB3Q9NQW8 809 aa14.51□□□□□ -0.09
VPS33B-206ENST00000557358 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.51□□□□□ -0.09
VPS33B-206ENST00000557358 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.51□□□□□ -0.09
VPS33B-206ENST00000557358 CEP83Q9Y592 693 aa14.51□□□□□ -0.09
VPS33B-206ENST00000557358 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms