RNA–Protein interactions for RNA: ENST00000556705.5

SRP54-AS1-204, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 2 BASIC

Gene SRP54-AS1, Length 580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-204ENST00000556705 AMPD2Q01433 879 aa13.96□□□□□ -0.17
SRP54-AS1-204ENST00000556705 SATB1Q01826 763 aa13.96□□□□□ -0.17
SRP54-AS1-204ENST00000556705 GRSF1Q12849 480 aaKnown RBP eCLIP13.96□□□□□ -0.17
SRP54-AS1-204ENST00000556705 NR1H3Q13133 447 aa13.96□□□□□ -0.17
SRP54-AS1-204ENST00000556705 GAB4Q2WGN9 574 aa13.96□□□□□ -0.17
SRP54-AS1-204ENST00000556705 PKN3Q6P5Z2 889 aa13.96□□□□□ -0.17
SRP54-AS1-204ENST00000556705 TTC30AQ86WT1 665 aa13.96□□□□□ -0.17
SRP54-AS1-204ENST00000556705 DDX42Q86XP3 938 aaKnown RBP eCLIP13.96□□□□□ -0.17
SRP54-AS1-204ENST00000556705 ARHGEF19Q8IW93 802 aa13.96□□□□□ -0.17
SRP54-AS1-204ENST00000556705 KIAA1958Q8N8K9 716 aa13.96□□□□□ -0.17
SRP54-AS1-204ENST00000556705 ANKRD52Q8NB46 1076 aa13.96□□□□□ -0.17
SRP54-AS1-204ENST00000556705 EHBP1Q8NDI1 1231 aa13.96□□□□□ -0.17
SRP54-AS1-204ENST00000556705 KAT5Q92993 513 aa13.96□□□□□ -0.17
SRP54-AS1-204ENST00000556705 P2RY13Q9BPV8 354 aa13.96□□□□□ -0.17
SRP54-AS1-204ENST00000556705 LMBRD1Q9NUN5 540 aa13.96□□□□□ -0.17
SRP54-AS1-204ENST00000556705 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.96□□□□□ -0.17
SRP54-AS1-204ENST00000556705 USP3Q9Y6I4 520 aa13.96□□□□□ -0.17
SRP54-AS1-204ENST00000556705 FAM186AA6NE01 2351 aa13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 PTPRZ1P23471 2315 aaPredicted RBP13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 A0A1W2PQH9 124 aa13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 E2F8A0AVK6 867 aa13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 RNF225M0QZC1 329 aaPredicted RBP13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 TULP2O00295 520 aa13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 AFPP02771 609 aaKnown RBP13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 CYP17A1P05093 508 aa13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 CCDC192P0DO97 292 aa13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 IRF1P10914 325 aa13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 CD19P15391 556 aa13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 YWHAEP62258 255 aaKnown RBP13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 GOLGA7BQ2TAP0 167 aa13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 ZC3H14Q6PJT7 736 aaKnown RBP13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 SCD5Q86SK9 330 aa13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 PIGZQ86VD9 579 aa13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 IRF2BP1Q8IU81 584 aa13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 PPM1KQ8N3J5 372 aa13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 SYNPOQ8N3V7 929 aa13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 MLKLQ8NB16 471 aa13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 ZBTB44Q8NCP5 570 aa13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 EZH1Q92800 747 aaPredicted RBP13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 CD101Q93033 1021 aa13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 KLF16Q9BXK1 252 aaPredicted RBP13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 UBXN6Q9BZV1 441 aa13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 SEMA4AQ9H3S1 761 aa13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 ZSCAN32Q9NX65 697 aa13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 NUDT5Q9UKK9 219 aa13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 RIF1Q5UIP0 2472 aaKnown RBP13.95□□□□□ -0.18
SRP54-AS1-204ENST00000556705 EML5Q05BV3 1969 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 SLC9A3R1O14745 358 aaPredicted RBP13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 MDM4O15151 490 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 LILRB5O75023 590 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 FGFR1OPO95684 399 aaKnown RBP13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 CALCAP01258 141 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 VDRP11473 427 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 RARGP13631 454 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 DRD1P21728 446 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 ATP5C1P36542 298 aaKnown RBP13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 OPRD1P41143 372 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 PDE4CQ08493 712 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 DMWDQ09019 674 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 CETN1Q12798 172 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 DHCR24Q15392 516 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 SGO2Q562F6 1265 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 RAB41Q5JT25 222 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 RHBDF2Q6PJF5 856 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 TMEM270Q6UE05 265 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 RRAGAQ7L523 313 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 CCDC186Q7Z3E2 898 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 CREBRFQ8IUR6 639 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 UBA3Q8TBC4 463 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 ATRIPQ8WXE1 791 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 TFAP2BQ92481 460 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 CNOT6LQ96LI5 555 aaKnown RBP13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 NACA2Q9H009 215 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 CYLDQ9NQC7 956 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 TBC1D14Q9P2M4 693 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 TSPAN16Q9UKR8 245 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 SH3BP1Q9Y3L3 701 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 PCDHB4Q9Y5E5 795 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 PCDHGA2Q9Y5H1 932 aa13.94□□□□□ -0.18
SRP54-AS1-204ENST00000556705 ANTXRLA6NF34 631 aa13.93□□□□□ -0.18
SRP54-AS1-204ENST00000556705 K7ESF4 209 aa13.93□□□□□ -0.18
SRP54-AS1-204ENST00000556705 O00370 1275 aa13.93□□□□□ -0.18
SRP54-AS1-204ENST00000556705 RNF40O75150 1001 aa13.93□□□□□ -0.18
SRP54-AS1-204ENST00000556705 LMNAP02545 664 aaKnown RBP13.93□□□□□ -0.18
SRP54-AS1-204ENST00000556705 SLC6A11P48066 632 aa13.93□□□□□ -0.18
SRP54-AS1-204ENST00000556705 BBS7Q8IWZ6 715 aa13.93□□□□□ -0.18
SRP54-AS1-204ENST00000556705 SUMF1Q8NBK3 374 aa13.93□□□□□ -0.18
SRP54-AS1-204ENST00000556705 NDRG1Q92597 394 aaKnown RBP13.93□□□□□ -0.18
SRP54-AS1-204ENST00000556705 KREMEN1Q96MU8 473 aa13.93□□□□□ -0.18
SRP54-AS1-204ENST00000556705 ZSWIM1Q9BR11 485 aa13.93□□□□□ -0.18
SRP54-AS1-204ENST00000556705 FAM126AQ9BYI3 521 aaPredicted RBP13.93□□□□□ -0.18
SRP54-AS1-204ENST00000556705 INTS2Q9H0H0 1204 aaKnown RBP13.93□□□□□ -0.18
SRP54-AS1-204ENST00000556705 NUP62CLQ9H1M0 184 aa13.93□□□□□ -0.18
SRP54-AS1-204ENST00000556705 POLR3BQ9NW08 1133 aaPredicted RBP13.93□□□□□ -0.18
SRP54-AS1-204ENST00000556705 NAGPAQ9UK23 515 aa13.93□□□□□ -0.18
SRP54-AS1-204ENST00000556705 KIAA1257Q9ULG3 409 aa13.93□□□□□ -0.18
SRP54-AS1-204ENST00000556705 XPO1O14980 1071 aaKnown RBP13.92□□□□□ -0.18
SRP54-AS1-204ENST00000556705 GREM1O60565 184 aa13.92□□□□□ -0.18
SRP54-AS1-204ENST00000556705 PAPSS2O95340 614 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms