RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 TRDMT1O14717 391 aaKnown RBP8.55□□□□□ -1.04
VTI1B-206ENST00000556461 GREM1O60565 184 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 TLR5O60602 858 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 GFRA3O60609 400 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 GABBR2O75899 941 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 GNA14O95837 355 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 CYP17A1P05093 508 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 IRF1P10914 325 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 CD19P15391 556 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 OPRD1P41143 372 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 MAGEA9P43362 315 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 TUBP50607 506 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 PDE6CP51160 858 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 PDE4CQ08493 712 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 TMEM196Q5HYL7 178 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 GJB7Q6PEY0 223 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 RHBDF2Q6PJF5 856 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 TMEM270Q6UE05 265 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 BHLHA9Q7RTU4 235 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 CREBRFQ8IUR6 639 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 SFTPA1Q8IWL2 248 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 PPM1KQ8N3J5 372 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 CPA6Q8N4T0 437 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 TTC39CQ8N584 583 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 MLKLQ8NB16 471 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 ANKRD52Q8NB46 1076 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 UBA3Q8TBC4 463 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 NELL1Q92832 810 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 ATP2A3Q93084 1043 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 P2RY11Q96G91 374 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 IPO9Q96P70 1041 aaKnown RBP8.55□□□□□ -1.04
VTI1B-206ENST00000556461 CRACR2AQ9BSW2 395 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 KLF16Q9BXK1 252 aaPredicted RBP8.55□□□□□ -1.04
VTI1B-206ENST00000556461 FBXO44Q9H4M3 255 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 PNPLA8Q9NP80 782 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.55□□□□□ -1.04
VTI1B-206ENST00000556461 TSPAN16Q9UKR8 245 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 FBXO4Q9UKT5 387 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 PCDHB4Q9Y5E5 795 aa8.55□□□□□ -1.04
VTI1B-206ENST00000556461 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.55□□□□□ -1.04
VTI1B-206ENST00000556461 K7ESF4 209 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 P4HA2O15460 535 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 CCDC192P0DO97 292 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 VDRP11473 427 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 RARGP13631 454 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 SLC9A1P19634 815 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 TBXAS1P24557 533 aaPredicted RBP8.54□□□□□ -1.04
VTI1B-206ENST00000556461 BRD2P25440 801 aaKnown RBP8.54□□□□□ -1.04
VTI1B-206ENST00000556461 SLC6A11P48066 632 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 ZNF132P52740 706 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 LRRC32Q14392 662 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 DHCR24Q15392 516 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 PKDCCQ504Y2 493 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 SGO2Q562F6 1265 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 HSP90AA4PQ58FG1 418 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 RAB41Q5JT25 222 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 DGKKQ5KSL6 1271 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 C1orf228Q6PIY5 440 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 CCDC186Q7Z3E2 898 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 C12orf40Q86WS4 652 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 BBS7Q8IWZ6 715 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 ADGRG2Q8IZP9 1017 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 RBBP8NLQ8NC74 664 aaPredicted RBP8.54□□□□□ -1.04
VTI1B-206ENST00000556461 P2RY13Q9BPV8 354 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 ULBP1Q9BZM6 244 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 FAM124BQ9H5Z6 455 aaPredicted RBP8.54□□□□□ -1.04
VTI1B-206ENST00000556461 ACP6Q9NPH0 428 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 CYLDQ9NQC7 956 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 TLR8Q9NR97 1041 aaKnown RBP8.54□□□□□ -1.04
VTI1B-206ENST00000556461 NAGPAQ9UK23 515 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 AJAP1Q9UKB5 411 aaPredicted RBP8.54□□□□□ -1.04
VTI1B-206ENST00000556461 HELZP42694 1942 aaKnown RBP8.54□□□□□ -1.04
VTI1B-206ENST00000556461 SPTBN4Q9H254 2564 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 DMXL1Q9Y485 3027 aa8.54□□□□□ -1.04
VTI1B-206ENST00000556461 MYH10P35580 1976 aa8.53□□□□□ -1.04
VTI1B-206ENST00000556461 E2F8A0AVK6 867 aa8.53□□□□□ -1.04
VTI1B-206ENST00000556461 PIK3R2O00459 728 aa8.53□□□□□ -1.04
VTI1B-206ENST00000556461 XPO1O14980 1071 aaKnown RBP8.53□□□□□ -1.04
VTI1B-206ENST00000556461 RNF40O75150 1001 aa8.53□□□□□ -1.04
VTI1B-206ENST00000556461 NFATC1O95644 943 aa8.53□□□□□ -1.04
VTI1B-206ENST00000556461 FGFR1OPO95684 399 aaKnown RBP8.53□□□□□ -1.04
VTI1B-206ENST00000556461 PAEPP09466 180 aa8.53□□□□□ -1.04
VTI1B-206ENST00000556461 CHRM1P11229 460 aaPredicted RBP8.53□□□□□ -1.04
VTI1B-206ENST00000556461 TRIM21P19474 475 aaKnown RBP8.53□□□□□ -1.04
VTI1B-206ENST00000556461 CXCL12P48061 93 aa8.53□□□□□ -1.04
VTI1B-206ENST00000556461 RGS7P49802 495 aa8.53□□□□□ -1.04
VTI1B-206ENST00000556461 TKTL1P51854 596 aa8.53□□□□□ -1.04
VTI1B-206ENST00000556461 YWHAEP62258 255 aaKnown RBP8.53□□□□□ -1.04
VTI1B-206ENST00000556461 GCNT1Q02742 428 aa8.53□□□□□ -1.04
VTI1B-206ENST00000556461 CETN1Q12798 172 aa8.53□□□□□ -1.04
VTI1B-206ENST00000556461 GRSF1Q12849 480 aaKnown RBP eCLIP8.53□□□□□ -1.04
VTI1B-206ENST00000556461 ZNF528Q3MIS6 628 aa8.53□□□□□ -1.04
VTI1B-206ENST00000556461 C10orf120Q5SQS8 335 aa8.53□□□□□ -1.04
VTI1B-206ENST00000556461 LY6G5CQ5SRR4 150 aa8.53□□□□□ -1.04
VTI1B-206ENST00000556461 DPY19L2P1Q6NXN4 242 aa8.53□□□□□ -1.04
VTI1B-206ENST00000556461 LCLAT1Q6UWP7 414 aa8.53□□□□□ -1.04
VTI1B-206ENST00000556461 MAMSTRQ6ZN01 415 aa8.53□□□□□ -1.04
VTI1B-206ENST00000556461 TMEM25Q86YD3 366 aa8.53□□□□□ -1.04
VTI1B-206ENST00000556461 SPEM1Q8N4L4 309 aa8.53□□□□□ -1.04
VTI1B-206ENST00000556461 ZBTB44Q8NCP5 570 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms