RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 PARVGQ9HBI0 331 aa6.25□□□□□ -1.41
PRKCH-220ENST00000556164 ARNT2Q9HBZ2 717 aa6.25□□□□□ -1.41
PRKCH-220ENST00000556164 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.25□□□□□ -1.41
PRKCH-220ENST00000556164 TMLHEQ9NVH6 421 aa6.25□□□□□ -1.41
PRKCH-220ENST00000556164 UXTQ9UBK9 157 aaPredicted RBP6.25□□□□□ -1.41
PRKCH-220ENST00000556164 ODF2LQ9ULJ1 636 aa6.25□□□□□ -1.41
PRKCH-220ENST00000556164 LIMCH1Q9UPQ0 1083 aa6.25□□□□□ -1.41
PRKCH-220ENST00000556164 WASF3Q9UPY6 502 aa6.25□□□□□ -1.41
PRKCH-220ENST00000556164 C2CD2Q9Y426 696 aa6.25□□□□□ -1.41
PRKCH-220ENST00000556164 MYH10P35580 1976 aa6.25□□□□□ -1.41
PRKCH-220ENST00000556164 ATRXP46100 2492 aa6.25□□□□□ -1.41
PRKCH-220ENST00000556164 ADAMTS20P59510 1910 aa6.25□□□□□ -1.41
PRKCH-220ENST00000556164 IGF2RP11717 2491 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 CEP295Q9C0D2 2601 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 CACNA1EQ15878 2313 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 CCDC189A1A4V9 331 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 C2orf78A6NCI8 922 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 KPNA7A9QM74 516 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 TISP43B9A030 160 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 HYAL3O43820 417 aaPredicted RBP6.24□□□□□ -1.41
PRKCH-220ENST00000556164 TBCAO75347 108 aaKnown RBP6.24□□□□□ -1.41
PRKCH-220ENST00000556164 NOL4O94818 638 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 NFATC1O95644 943 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 PTMSP20962 102 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 SCP2P22307 547 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 ACAT1P24752 427 aaKnown RBP6.24□□□□□ -1.41
PRKCH-220ENST00000556164 CYP2F1P24903 491 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 RPL10AP62906 217 aaKnown RBP6.24□□□□□ -1.41
PRKCH-220ENST00000556164 ATP2C1P98194 919 aaPredicted RBP6.24□□□□□ -1.41
PRKCH-220ENST00000556164 LMAN2Q12907 356 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 KCNB1Q14721 858 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 AGERQ15109 404 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 TMEM119Q4V9L6 283 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 C4orf48Q5BLP8 95 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 TRIM61Q5EBN2 209 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 MCTP1Q6DN14 999 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 XKR5Q6UX68 686 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 RASSF3Q86WH2 238 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 SCN4BQ8IWT1 228 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 PDCL2Q8N4E4 241 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 CCDC33Q8N5R6 958 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 ARL14EPQ8N8R7 260 aaPredicted RBP6.24□□□□□ -1.41
PRKCH-220ENST00000556164 FSIP1Q8NA03 581 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 MDGA1Q8NFP4 955 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 SH3RF2Q8TEC5 729 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 USP33Q8TEY7 942 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 CHAC2Q8WUX2 184 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 LEO1Q8WVC0 666 aaPredicted RBP6.24□□□□□ -1.41
PRKCH-220ENST00000556164 KCNN1Q92952 543 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 ZNF669Q96BR6 464 aaPredicted RBP6.24□□□□□ -1.41
PRKCH-220ENST00000556164 ANAPC16Q96DE5 110 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 IFT43Q96FT9 208 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 TRMT2BQ96GJ1 504 aaKnown RBP6.24□□□□□ -1.41
PRKCH-220ENST00000556164 ZFRQ96KR1 1074 aaKnown RBP6.24□□□□□ -1.41
PRKCH-220ENST00000556164 CNOT6LQ96LI5 555 aaKnown RBP6.24□□□□□ -1.41
PRKCH-220ENST00000556164 NUSAP1Q9BXS6 441 aaKnown RBP6.24□□□□□ -1.41
PRKCH-220ENST00000556164 CCSER1Q9C0I3 900 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 SLC32A1Q9H598 525 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 ASB7Q9H672 318 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 TMEM206Q9H813 350 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 ETNK1Q9HBU6 452 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 DDX43Q9NXZ2 648 aaKnown RBP6.24□□□□□ -1.41
PRKCH-220ENST00000556164 MCM8Q9UJA3 840 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 KLK13Q9UKR3 277 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 AGO2Q9UKV8 859 aaKnown RBP6.24□□□□□ -1.41
PRKCH-220ENST00000556164 MMP17Q9ULZ9 603 aa6.24□□□□□ -1.41
PRKCH-220ENST00000556164 ATXN2Q99700 1313 aaKnown RBP6.24□□□□□ -1.41
PRKCH-220ENST00000556164 ASPMQ8IZT6 3477 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 SPAARA0A1B0GVQ0 90 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 ANTXRLA6NF34 631 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 ANKRD63C9JTQ0 380 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 K7EQS6 105 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 CDK2AP1O14519 115 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 SMAD7O15105 426 aaKnown RBP6.23□□□□□ -1.41
PRKCH-220ENST00000556164 GREM1O60565 184 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 HUS1O60921 280 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 ALDH1A2O94788 518 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 IL18RAPO95256 599 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 ENGP17813 658 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 HDCP19113 662 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 GSTT1P30711 240 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 POLR2BP30876 1174 aaKnown RBP6.23□□□□□ -1.41
PRKCH-220ENST00000556164 ABCD1P33897 745 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 OPRD1P41143 372 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 PNPLA4P41247 253 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 ZNF131P52739 623 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 SIM1P81133 766 aaPredicted RBP6.23□□□□□ -1.41
PRKCH-220ENST00000556164 TFAMQ00059 246 aaKnown RBP6.23□□□□□ -1.41
PRKCH-220ENST00000556164 MYL7Q01449 175 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 RING1Q06587 406 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 BRD3Q15059 726 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 CRY1Q16526 586 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 CCDC142Q17RM4 750 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 ZC2HC1CQ53FD0 456 aaPredicted RBP6.23□□□□□ -1.41
PRKCH-220ENST00000556164 RILPL1Q5EBL4 403 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 INTS6LQ5JSJ4 861 aaKnown RBP6.23□□□□□ -1.41
PRKCH-220ENST00000556164 LMBRD2Q68DH5 695 aaPredicted RBP6.23□□□□□ -1.41
PRKCH-220ENST00000556164 SLFN12LQ6IEE8 588 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 LRSAM1Q6UWE0 723 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms