RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 NDUFA10O95299 355 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 LSM8O95777 96 aaKnown RBP12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 RETP07949 1114 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 UNGP13051 313 aaPredicted RBP12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 TDGF1P13385 188 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 NOMO3P69849 1222 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 GFPT1Q06210 699 aaPredicted RBP12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 MAPRE1Q15691 268 aaKnown RBP12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 CSRP2Q16527 193 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 CLEC16AQ2KHT3 1053 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 HS1BP3Q53T59 392 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 LAIR1Q6GTX8 287 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 DENND1BQ6P3S1 775 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 TOGARAM2Q6ZUX3 1019 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 VPS36Q86VN1 386 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 TTC30AQ86WT1 665 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 PASD1Q8IV76 773 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 CYFIP2Q96F07 1278 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 KLHL5Q96PQ7 755 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 EIF3CQ99613 913 aaKnown RBP12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 CLSTN3Q9BQT9 956 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 TMEM121BQ9BXQ6 578 aaPredicted RBP12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 ZNF518BQ9C0D4 1074 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 LHX5Q9H2C1 402 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 DEF6Q9H4E7 631 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 RXFP1Q9HBX9 757 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 NAGPAQ9UK23 515 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 REXO2Q9Y3B8 237 aaKnown RBP12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 CDY1Q9Y6F8 540 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 EPN1Q9Y6I3 576 aaPredicted RBP12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 WDFY3Q8IZQ1 3526 aa12.38□□□□□ -0.43
MTHFD1-211ENST00000555709 ITPR1Q14643 2758 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 DMXL2Q8TDJ6 3036 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 WDR27A2RRH5 827 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 CLDN5O00501 218 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 C2CD2LO14523 706 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 PAPLNO95428 1278 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 VNN2O95498 520 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 LAMP2P13473 410 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 RPL17P18621 184 aaKnown RBP12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 TNFAIP3P21580 790 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 ADORA2BP29275 332 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 CYLC1P35663 651 aaPredicted RBP12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 MAGEA9P43362 315 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 BCAT1P54687 386 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 GPC5P78333 572 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 ROR1Q01973 937 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 CREMQ03060 361 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 CENPCQ03188 943 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 GPR17Q13304 367 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 LPAL2Q16609 132 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 NFE2Q16621 373 aaPredicted RBP12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 CFAP221Q4G0U5 840 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 SLC39A12Q504Y0 691 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 DCP1BQ8IZD4 617 aaKnown RBP12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 WDTC1Q8N5D0 677 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 ANKRD52Q8NB46 1076 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 C1orf131Q8NDD1 294 aaKnown RBP12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 CLDN23Q96B33 292 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 DESI2Q9BSY9 194 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 RPP25Q9BUL9 199 aaKnown RBP12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 FAM126AQ9BYI3 521 aaPredicted RBP12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 MRPL17Q9NRX2 175 aaKnown RBP12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 KRT82Q9NSB4 513 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 TMEM30AQ9NV96 361 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 TAS2R14Q9NYV8 317 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 FNIP2Q9P278 1114 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 CYTH4Q9UIA0 394 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 PYCARDQ9ULZ3 195 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 SSX2IPQ9Y2D8 614 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 NUMBLQ9Y6R0 609 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 RALGAPA1Q6GYQ0 2036 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 ATP8B3O60423 1300 aa12.37□□□□□ -0.43
MTHFD1-211ENST00000555709 MTMR11A4FU01 709 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 FAM170BA6NMN3 283 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 CNPP09543 421 aaKnown RBP12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 FAM200BP0CF97 657 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 SETSIPP0DME0 302 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 GZMAP12544 262 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 CPB1P15086 417 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 OR1D2P34982 312 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 GPD2P43304 727 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 CACNA2D1P54289 1103 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 CYP27A1Q02318 531 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 PRKCQQ04759 706 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 RING1Q06587 406 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 BST2Q10589 180 aaKnown RBP12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 SMARCB1Q12824 385 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 PDCLQ13371 301 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 NAA35Q5VZE5 725 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 ALKBH5Q6P6C2 394 aaKnown RBP12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 C4orf50Q6ZRC1 276 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 CLEC20AQ6ZU45 233 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 TMEM35BQ8NCS4 154 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 ACRBPQ8NEB7 543 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 ZMIZ2Q8NF64 920 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 ST13P5Q8NFI4 369 aaPredicted RBP12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 C2orf15Q8WU43 125 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms