RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 RALGAPA2Q2PPJ7 1873 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 TRIM43BA6NCK2 446 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 SCAMP3O14828 347 aaKnown RBP7.22□□□□□ -1.25
KTN1-213ENST00000554306 STX10O60499 249 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 NBNO60934 754 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 IL18RAPO95256 599 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 MPOP05164 745 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 TPM3P06753 285 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 PFKMP08237 780 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 CLTAP09496 248 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 ITGA4P13612 1032 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 IBSPP21815 317 aaPredicted RBP7.22□□□□□ -1.25
KTN1-213ENST00000554306 CASP4P49662 377 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 VAMP7P51809 220 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 YBX1P67809 324 aaKnown RBP7.22□□□□□ -1.25
KTN1-213ENST00000554306 POU5F1Q01860 360 aaKnown RBP7.22□□□□□ -1.25
KTN1-213ENST00000554306 PPIGQ13427 754 aaKnown RBP eCLIP7.22□□□□□ -1.25
KTN1-213ENST00000554306 NCAPHQ15003 741 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 ZNF394Q53GI3 561 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 ANKRD39Q53RE8 183 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 HSP90AA4PQ58FG1 418 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 TCERG1LQ5VWI1 586 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 CWF19L1Q69YN2 538 aaKnown RBP7.22□□□□□ -1.25
KTN1-213ENST00000554306 CNKSR3Q6P9H4 555 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 CRTC3Q6UUV7 619 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 LRRC55Q6ZSA7 311 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 TTLL10Q6ZVT0 673 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 CD302Q8IX05 232 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 ZC3H3Q8IXZ2 948 aaKnown RBP7.22□□□□□ -1.25
KTN1-213ENST00000554306 RBBP8NLQ8NC74 664 aaPredicted RBP7.22□□□□□ -1.25
KTN1-213ENST00000554306 DBF4BQ8NFT6 615 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 TRIM43Q96BQ3 446 aaPredicted RBP7.22□□□□□ -1.25
KTN1-213ENST00000554306 CCDC127Q96BQ5 260 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 CNOT6LQ96LI5 555 aaKnown RBP7.22□□□□□ -1.25
KTN1-213ENST00000554306 MED15Q96RN5 788 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 FNBP1Q96RU3 617 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 SGPP1Q9BX95 441 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 WNT8AQ9H1J5 351 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 TMX1Q9H3N1 280 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 PLEKHA5Q9HAU0 1116 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 UBN1Q9NPG3 1134 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 TOPORSQ9NS56 1045 aaPredicted RBP7.22□□□□□ -1.25
KTN1-213ENST00000554306 SNTG2Q9NY99 539 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 RBAKQ9NYW8 714 aaPredicted RBP7.22□□□□□ -1.25
KTN1-213ENST00000554306 MBD1Q9UIS9 605 aaPredicted RBP7.22□□□□□ -1.25
KTN1-213ENST00000554306 KCTD3Q9Y597 815 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 PCDHB2Q9Y5E7 798 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.22□□□□□ -1.25
KTN1-213ENST00000554306 NR2E3Q9Y5X4 410 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 TDRD15B5MCY1 1934 aaKnown RBP7.22□□□□□ -1.25
KTN1-213ENST00000554306 MICAL3Q7RTP6 2002 aa7.22□□□□□ -1.25
KTN1-213ENST00000554306 PDCD11Q14690 1871 aaKnown RBP7.21□□□□□ -1.25
KTN1-213ENST00000554306 A0A0U1RQF3 1178 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 ABHD14A-ACY1A0A1B0GW23 586 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 FAM86C2PA6NEL3 165 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 C9IYK1 514 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 CBFA2T2O43439 604 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 EFCAB14O75071 495 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 N4BP1O75113 896 aaKnown RBP7.21□□□□□ -1.26
KTN1-213ENST00000554306 ZNF623O75123 536 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 AKAP3O75969 853 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 CXCL10P02778 98 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 STAG3L1P0CL83 205 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 CSF2RAP15509 400 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 TNNI1P19237 187 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 UBASH3AP57075 661 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 FPGSQ05932 587 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 ENPEPQ07075 957 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 CYP24A1Q07973 514 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 CETN1Q12798 172 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 BFSP1Q12934 665 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 PSMD6Q15008 389 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 MAN2A1Q16706 1144 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 VWA3BQ502W6 1294 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 DCAF17Q5H9S7 520 aaPredicted RBP7.21□□□□□ -1.26
KTN1-213ENST00000554306 UBXN11Q5T124 520 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 LILRA6Q6PI73 481 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 SLC24A5Q71RS6 500 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 SLCO6A1Q86UG4 719 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 CBWD2Q8IUF1 395 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 TMEM151BQ8IW70 566 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 RNF169Q8NCN4 708 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 CACTINQ8WUQ7 758 aaKnown RBP7.21□□□□□ -1.26
KTN1-213ENST00000554306 ANP32BQ92688 251 aaKnown RBP7.21□□□□□ -1.26
KTN1-213ENST00000554306 BADQ92934 168 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 SIGLEC10Q96LC7 697 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 RPS6KC1Q96S38 1066 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 TSPAN18Q96SJ8 248 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 TUBGCP2Q9BSJ2 902 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 APOL6Q9BWW8 343 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 EIF2AQ9BY44 585 aaKnown RBP7.21□□□□□ -1.26
KTN1-213ENST00000554306 HAPLN2Q9GZV7 340 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 VPS16Q9H269 839 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 GRPEL1Q9HAV7 217 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 IL23AQ9NPF7 189 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 RGS18Q9NS28 235 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 IGSF5Q9NSI5 407 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 AP5S1Q9NUS5 200 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 TAB2Q9NYJ8 693 aa7.21□□□□□ -1.26
KTN1-213ENST00000554306 LIMA1Q9UHB6 759 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms