RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 KLHL5Q96PQ7 755 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 CNPY3Q9BT09 278 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 EMILIN2Q9BXX0 1053 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 NKX2-4Q9H2Z4 354 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 FBXO44Q9H4M3 255 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 CYP4F11Q9HBI6 524 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 COMMD8Q9NX08 183 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.32□□□□□ -0.44
NEK9-202ENST00000553823 IL37Q9NZH6 218 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 PACSIN2Q9UNF0 486 aaPredicted RBP12.32□□□□□ -0.44
NEK9-202ENST00000553823 USTQ9Y2C2 406 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 C2orf71A6NGG8 1288 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 YJEFN3A6XGL0 299 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 E7ENQ6 273 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 H3BNC9 293 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 PRRG1O14668 218 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 FSCN2O14926 492 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 RNF8O76064 485 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 LTFP02788 710 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 PRLRP16471 622 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 DESP17661 470 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 TCP1P17987 556 aaKnown RBP12.31□□□□□ -0.44
NEK9-202ENST00000553823 ATF6P18850 670 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 CTNNA2P26232 953 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 SDC4P31431 198 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 MATKP42679 507 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 ALDH1A3P47895 512 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 RGS19P49795 217 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 DNA2P51530 1060 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 AMPD2Q01433 879 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 TUBB2AQ13885 445 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 PPP2R2DQ66LE6 453 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 PDE12Q6L8Q7 609 aaKnown RBP12.31□□□□□ -0.44
NEK9-202ENST00000553823 CC2D1AQ6P1N0 951 aaPredicted RBP12.31□□□□□ -0.44
NEK9-202ENST00000553823 HFE2Q6ZVN8 426 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 BHLHA9Q7RTU4 235 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 TCEAL8Q8IYN2 117 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 TDHQ8IZJ6 230 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 DEFB106AQ8N104 65 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 UBL4BQ8N7F7 174 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 GPR152Q8TDT2 470 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 MICAL1Q8TDZ2 1067 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 GOLGA1Q92805 767 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 CD101Q93033 1021 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 SLC2A13Q96QE2 648 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 DDX23Q9BUQ8 820 aaKnown RBP12.31□□□□□ -0.44
NEK9-202ENST00000553823 TUBB2BQ9BVA1 445 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 TRIM62Q9BVG3 475 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 POPDC2Q9HBU9 364 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 SNX12Q9UMY4 172 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 SCML2Q9UQR0 700 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 SAR1BQ9Y6B6 198 aa12.31□□□□□ -0.44
NEK9-202ENST00000553823 RANBP2P49792 3224 aaKnown RBP12.31□□□□□ -0.44
NEK9-202ENST00000553823 FAM92AA1XBS5 289 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 CCDC66A2RUB6 948 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 SLC38A8A6NNN8 435 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 HIDE1A8MVS5 230 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 CAPN9O14815 690 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 DDX3YO15523 660 aaKnown RBP12.3□□□□□ -0.44
NEK9-202ENST00000553823 TGM5O43548 720 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 CSPG5O95196 566 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 KLRC2P26717 231 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 YWHAQP27348 245 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 CTNNA1P35221 906 aaKnown RBP12.3□□□□□ -0.44
NEK9-202ENST00000553823 NOS2P35228 1153 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 SSR1P43307 286 aaKnown RBP12.3□□□□□ -0.44
NEK9-202ENST00000553823 PTPN9P43378 593 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 USP46P62068 366 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 CAMK1Q14012 370 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 CCDC14Q49A88 953 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 DCAF6Q58WW2 860 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 BSPRYQ5W0U4 402 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 BEND5Q7L4P6 421 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 MON1AQ86VX9 555 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 STKLD1Q8NE28 680 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 GIPC2Q8TF65 315 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 CFAP57Q96MR6 1250 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 OSBPL9Q96SU4 736 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 NCAPGQ9BPX3 1015 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 EHD2Q9NZN4 543 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 STAP1Q9ULZ2 295 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 YIPF1Q9Y548 306 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 PCDHA3Q9Y5H8 950 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 DOCK6Q96HP0 2047 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 CHD7Q9P2D1 2997 aa12.3□□□□□ -0.44
NEK9-202ENST00000553823 ATG2AQ2TAZ0 1938 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 KCNK3O14649 394 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 PSTPIP1O43586 416 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 LRCH4O75427 683 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 GLUD1P00367 558 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 FYNP06241 537 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 CSH1P0DML2 217 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 CSH2P0DML3 217 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 PCK1P35558 622 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 IRS1P35568 1242 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 TAS2R40P59535 323 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 YWHAGP61981 247 aaKnown RBP eCLIP12.29□□□□□ -0.44
NEK9-202ENST00000553823 ATP11AP98196 1134 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 PLD1Q13393 1074 aa12.29□□□□□ -0.44
NEK9-202ENST00000553823 MTMR3Q13615 1198 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms