RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 EEPD1Q7L9B9 569 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 PRUNE1Q86TP1 453 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.65□□□□□ -1.18
BEST3-212ENST00000553096 SMYD1Q8NB12 490 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 CCDC110Q8TBZ0 833 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 GIMAP1Q8WWP7 306 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 SKA1Q96BD8 255 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 MAK16Q9BXY0 300 aaKnown RBP7.65□□□□□ -1.18
BEST3-212ENST00000553096 ZNF408Q9H9D4 720 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 AASDHPPTQ9NRN7 309 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 DDX43Q9NXZ2 648 aaKnown RBP7.65□□□□□ -1.18
BEST3-212ENST00000553096 HEY2Q9UBP5 337 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 SLC4A7Q9Y6M7 1214 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 PDLIM1O00151 329 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 FAM189A1O60320 539 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 ITGAVP06756 1048 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 ACOT2P49753 483 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 VCPP55072 806 aaKnown RBP7.65□□□□□ -1.18
BEST3-212ENST00000553096 C1QBPQ07021 282 aaKnown RBP7.65□□□□□ -1.18
BEST3-212ENST00000553096 CAPSQ13938 189 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 TBCCQ15814 346 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 MAPK6Q16659 721 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 HIF1AQ16665 826 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 CCDC92Q53HC0 331 aaPredicted RBP7.65□□□□□ -1.18
BEST3-212ENST00000553096 ACSBG2Q5FVE4 666 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 SPOPLQ6IQ16 392 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 PLEKHA7Q6IQ23 1121 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 RFWD3Q6PCD5 774 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 DSTYKQ6XUX3 929 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 TRIM50Q86XT4 487 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 DCLK2Q8N568 766 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 PDCD7Q8N8D1 485 aaKnown RBP7.65□□□□□ -1.18
BEST3-212ENST00000553096 GATA6Q92908 595 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 NKD2Q969F2 451 aaPredicted RBP7.65□□□□□ -1.18
BEST3-212ENST00000553096 CDCA5Q96FF9 252 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 OLFM3Q96PB7 478 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 DHRS4Q9BTZ2 278 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 ACSS3Q9H6R3 686 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 DMAP1Q9NPF5 467 aaPredicted RBP7.65□□□□□ -1.18
BEST3-212ENST00000553096 PARVAQ9NVD7 372 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 DDX56Q9NY93 547 aaKnown RBP7.65□□□□□ -1.18
BEST3-212ENST00000553096 RBPJLQ9UBG7 517 aa7.65□□□□□ -1.18
BEST3-212ENST00000553096 PDCD11Q14690 1871 aaKnown RBP7.65□□□□□ -1.19
BEST3-212ENST00000553096 A0A0G2JND7 137 aa7.65□□□□□ -1.19
BEST3-212ENST00000553096 IQANK1A0A1B0GTG1 560 aa7.65□□□□□ -1.19
BEST3-212ENST00000553096 TMEM221A6NGB7 291 aa7.65□□□□□ -1.19
BEST3-212ENST00000553096 EIF4E1BA6NMX2 242 aaKnown RBP7.65□□□□□ -1.19
BEST3-212ENST00000553096 KRT36O76013 467 aa7.65□□□□□ -1.19
BEST3-212ENST00000553096 PIGRP01833 764 aa7.65□□□□□ -1.19
BEST3-212ENST00000553096 C4BPAP04003 597 aaKnown RBP7.65□□□□□ -1.19
BEST3-212ENST00000553096 KRT1P04264 644 aa7.65□□□□□ -1.19
BEST3-212ENST00000553096 ADRA1DP25100 572 aa7.65□□□□□ -1.19
BEST3-212ENST00000553096 CDK18Q07002 472 aa7.65□□□□□ -1.19
BEST3-212ENST00000553096 TRMT5Q32P41 509 aaKnown RBP7.65□□□□□ -1.19
BEST3-212ENST00000553096 DNAL1Q4LDG9 190 aa7.65□□□□□ -1.19
BEST3-212ENST00000553096 SEZ6Q53EL9 994 aa7.65□□□□□ -1.19
BEST3-212ENST00000553096 PPP1R15BQ5SWA1 713 aa7.65□□□□□ -1.19
BEST3-212ENST00000553096 GJC2Q5T442 439 aaPredicted RBP7.65□□□□□ -1.19
BEST3-212ENST00000553096 GPAT2Q6NUI2 795 aa7.65□□□□□ -1.19
BEST3-212ENST00000553096 NET1Q7Z628 596 aaPredicted RBP7.65□□□□□ -1.19
BEST3-212ENST00000553096 PHF13Q86YI8 300 aaPredicted RBP7.65□□□□□ -1.19
BEST3-212ENST00000553096 PPIL6Q8IXY8 311 aa7.65□□□□□ -1.19
BEST3-212ENST00000553096 BANPQ8N9N5 519 aa7.65□□□□□ -1.19
BEST3-212ENST00000553096 PYROXD1Q8WU10 500 aa7.65□□□□□ -1.19
BEST3-212ENST00000553096 PTPRN2Q92932 1015 aa7.65□□□□□ -1.19
BEST3-212ENST00000553096 SLITRK1Q96PX8 696 aa7.65□□□□□ -1.19
BEST3-212ENST00000553096 GORASP1Q9BQQ3 440 aa7.65□□□□□ -1.19
BEST3-212ENST00000553096 PPP1R12CQ9BZL4 782 aa7.65□□□□□ -1.19
BEST3-212ENST00000553096 APOBEC3GQ9HC16 384 aaKnown RBP7.65□□□□□ -1.19
BEST3-212ENST00000553096 ARL8BQ9NVJ2 186 aa7.65□□□□□ -1.19
BEST3-212ENST00000553096 DCTN4Q9UJW0 460 aa7.65□□□□□ -1.19
BEST3-212ENST00000553096 CSADQ9Y600 493 aa7.65□□□□□ -1.19
BEST3-212ENST00000553096 CENPFP49454 3210 aa7.64□□□□□ -1.19
BEST3-212ENST00000553096 CNTNAP2Q9UHC6 1331 aa7.64□□□□□ -1.19
BEST3-212ENST00000553096 A0A1W2PPM1 405 aa7.64□□□□□ -1.19
BEST3-212ENST00000553096 KLF11O14901 512 aa7.64□□□□□ -1.19
BEST3-212ENST00000553096 EXTL3O43909 919 aa7.64□□□□□ -1.19
BEST3-212ENST00000553096 DKC1O60832 514 aaKnown RBP eCLIP7.64□□□□□ -1.19
BEST3-212ENST00000553096 CFHP08603 1231 aa7.64□□□□□ -1.19
BEST3-212ENST00000553096 RARBP10826 455 aa7.64□□□□□ -1.19
BEST3-212ENST00000553096 CD58P19256 250 aa7.64□□□□□ -1.19
BEST3-212ENST00000553096 TCF7P36402 384 aaPredicted RBP7.64□□□□□ -1.19
BEST3-212ENST00000553096 PGM1P36871 562 aa7.64□□□□□ -1.19
BEST3-212ENST00000553096 NAMPTP43490 491 aa7.64□□□□□ -1.19
BEST3-212ENST00000553096 POLE2P56282 527 aa7.64□□□□□ -1.19
BEST3-212ENST00000553096 TAS2R40P59535 323 aa7.64□□□□□ -1.19
BEST3-212ENST00000553096 PSMD6Q15008 389 aa7.64□□□□□ -1.19
BEST3-212ENST00000553096 PHLDB2Q86SQ0 1253 aa7.64□□□□□ -1.19
BEST3-212ENST00000553096 TMPRSS6Q8IU80 811 aa7.64□□□□□ -1.19
BEST3-212ENST00000553096 TTC13Q8NBP0 860 aa7.64□□□□□ -1.19
BEST3-212ENST00000553096 RFWD2Q8NHY2 731 aa7.64□□□□□ -1.19
BEST3-212ENST00000553096 FEZF2Q8TBJ5 459 aa7.64□□□□□ -1.19
BEST3-212ENST00000553096 TCP10LQ8TDR4 215 aa7.64□□□□□ -1.19
BEST3-212ENST00000553096 UCMAQ8WVF2 138 aa7.64□□□□□ -1.19
BEST3-212ENST00000553096 CPA5Q8WXQ8 436 aa7.64□□□□□ -1.19
BEST3-212ENST00000553096 DCPSQ96C86 337 aaKnown RBP7.64□□□□□ -1.19
BEST3-212ENST00000553096 CENPKQ9BS16 269 aa7.64□□□□□ -1.19
BEST3-212ENST00000553096 TARS2Q9BW92 718 aaKnown RBP7.64□□□□□ -1.19
BEST3-212ENST00000553096 TMEM120AQ9BXJ8 343 aa7.64□□□□□ -1.19
BEST3-212ENST00000553096 CCDC68Q9H2F9 335 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms