RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 FOXB2Q5VYV0 432 aa12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 SLC44A1Q8WWI5 657 aa12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 PPP1R16BQ96T49 567 aa12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 TLE6Q9H808 572 aa12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 MAN1C1Q9NR34 630 aa12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 ETNK2Q9NVF9 386 aa12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 SYNJ2BP-COX16A0A087WUM0 186 aa12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 GOLGA8QA0A0J9YX86 632 aa12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 GOLGA8OA6NCC3 632 aa12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 GOLGA8NF8WBI6 632 aa12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 DCXO43602 365 aa12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 CLPTM1O96005 669 aa12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 LDHAP00338 332 aaKnown RBP12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 HNRNPCP07910 306 aaKnown RBP eCLIP12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 PDGFRAP16234 1089 aa12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 WNT7BP56706 349 aa12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 PRKG1Q13976 671 aa12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 MASTLQ96GX5 879 aa12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 GRIP2Q9C0E4 1043 aa12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 SMYD2Q9NRG4 433 aa12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 GALNT8Q9NY28 637 aa12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 COX16Q9P0S2 106 aa12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 HERC5Q9UII4 1024 aaKnown RBP12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 USP21Q9UK80 565 aa12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 FIS1Q9Y3D6 152 aa12.03□□□□□ -0.48
PPFIA2-227ENST00000552948 SCN7AQ01118 1682 aa12.02□□□□□ -0.48
PPFIA2-227ENST00000552948 CAPN8A6NHC0 703 aa12.02□□□□□ -0.48
PPFIA2-227ENST00000552948 FAM200BP0CF97 657 aa12.02□□□□□ -0.48
PPFIA2-227ENST00000552948 VAV1P15498 845 aa12.02□□□□□ -0.48
PPFIA2-227ENST00000552948 TYK2P29597 1187 aa12.02□□□□□ -0.48
PPFIA2-227ENST00000552948 MIPP30301 263 aa12.02□□□□□ -0.48
PPFIA2-227ENST00000552948 RGS7P49802 495 aa12.02□□□□□ -0.48
PPFIA2-227ENST00000552948 ACTR3P61158 418 aa12.02□□□□□ -0.48
PPFIA2-227ENST00000552948 PDK3Q15120 406 aa12.02□□□□□ -0.48
PPFIA2-227ENST00000552948 HSP90AA5PQ58FG0 334 aa12.02□□□□□ -0.48
PPFIA2-227ENST00000552948 DENND1BQ6P3S1 775 aa12.02□□□□□ -0.48
PPFIA2-227ENST00000552948 EEPD1Q7L9B9 569 aa12.02□□□□□ -0.48
PPFIA2-227ENST00000552948 HPS6Q86YV9 775 aa12.02□□□□□ -0.48
PPFIA2-227ENST00000552948 TRIML2Q8N7C3 387 aa12.02□□□□□ -0.48
PPFIA2-227ENST00000552948 ZFAND2BQ8WV99 257 aa12.02□□□□□ -0.48
PPFIA2-227ENST00000552948 CDKL2Q92772 493 aa12.02□□□□□ -0.48
PPFIA2-227ENST00000552948 GATA6Q92908 595 aa12.02□□□□□ -0.48
PPFIA2-227ENST00000552948 KCNK13Q9HB14 408 aa12.02□□□□□ -0.48
PPFIA2-227ENST00000552948 CXorf49A8MYA2 514 aaPredicted RBP12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 INO80B-WBP1J3KQ70 363 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 MAGEC1O60732 1142 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 ICAM1P05362 532 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 NR3C2P08235 984 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 SCNN1BP51168 640 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 CRADDP78560 199 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 EMC2Q15006 297 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 MAP3K21Q5TCX8 1036 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 VWA5B1Q5TIE3 1220 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 TTLL6Q8N841 843 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 NAT8LQ8N9F0 302 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 STKLD1Q8NE28 680 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 INO80BQ9C086 356 aaPredicted RBP12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 CYP26B1Q9NR63 512 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 DDX60LQ5H9U9 1706 aaKnown RBP12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 PTPRJQ12913 1337 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 DHX15O43143 795 aaKnown RBP12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 MMP10P09238 476 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 ENO3P13929 434 aaPredicted RBP12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 VCLP18206 1134 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 SERPINB5P36952 375 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 TBL3Q12788 808 aaKnown RBP12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 CDAN1Q8IWY9 1227 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 SLC35B2Q8TB61 432 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 CERKQ8TCT0 537 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 SREK1Q8WXA9 508 aaKnown RBP12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 PGBD4Q96DM1 585 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 S100A14Q9HCY8 104 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 CYLDQ9NQC7 956 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 RNF146Q9NTX7 359 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 ASNSD1Q9NWL6 643 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 USP18Q9UMW8 372 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 AK5Q9Y6K8 562 aa12.02□□□□□ -0.49
PPFIA2-227ENST00000552948 RREB1Q92766 1687 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 H0YIN7 160 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 ENTPD3O75355 529 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 CSDE1O75534 798 aaKnown RBP12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 KLHL2O95198 593 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 VNN1O95497 513 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 C4BPAP04003 597 aaKnown RBP12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 IL1R2P27930 398 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 RBL1P28749 1068 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 SH3BGRP55822 239 aaPredicted RBP12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 USP46P62068 366 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 TAP1Q03518 808 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 DLG1Q12959 904 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 DUOXA2Q1HG44 320 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 SLC5A9Q2M3M2 681 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 SFT2D3Q587I9 215 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 PDCD2LQ9BRP1 358 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 PLLPQ9Y342 182 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 ZNF711Q9Y462 761 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 COL22A1Q8NFW1 1626 aaPredicted RBP12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 LRCH4O75427 683 aa12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 SORBS2O94875 1100 aaKnown RBP12.01□□□□□ -0.49
PPFIA2-227ENST00000552948 TGDSO95455 350 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms