RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 GRIA2P42262 883 aa18.98■□□□□ 0.63
PRPF40B-215ENST00000551418 SLC5A3P53794 718 aa18.98■□□□□ 0.63
PRPF40B-215ENST00000551418 SNRPFP62306 86 aaKnown RBP18.98■□□□□ 0.63
PRPF40B-215ENST00000551418 STK4Q13043 487 aa18.98■□□□□ 0.63
PRPF40B-215ENST00000551418 ZNF699Q32M78 642 aa18.98■□□□□ 0.63
PRPF40B-215ENST00000551418 MAP7D1Q3KQU3 841 aa18.98■□□□□ 0.63
PRPF40B-215ENST00000551418 HECTD3Q5T447 861 aa18.98■□□□□ 0.63
PRPF40B-215ENST00000551418 SH3PXD2AQ5TCZ1 1133 aa18.98■□□□□ 0.63
PRPF40B-215ENST00000551418 MIB1Q86YT6 1006 aa18.98■□□□□ 0.63
PRPF40B-215ENST00000551418 ETFBKMTQ8IXQ9 262 aa18.98■□□□□ 0.63
PRPF40B-215ENST00000551418 KIAA1958Q8N8K9 716 aa18.98■□□□□ 0.63
PRPF40B-215ENST00000551418 VRTNQ9H8Y1 702 aa18.98■□□□□ 0.63
PRPF40B-215ENST00000551418 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.98■□□□□ 0.63
PRPF40B-215ENST00000551418 SERTAD1Q9UHV2 236 aa18.98■□□□□ 0.63
PRPF40B-215ENST00000551418 ZFHX4Q86UP3 3567 aa18.97■□□□□ 0.63
PRPF40B-215ENST00000551418 TULP3O75386 442 aa18.97■□□□□ 0.63
PRPF40B-215ENST00000551418 AP1G2O75843 785 aa18.97■□□□□ 0.63
PRPF40B-215ENST00000551418 TBX18O95935 607 aa18.97■□□□□ 0.63
PRPF40B-215ENST00000551418 ZDHHC11BP0C7U3 371 aa18.97■□□□□ 0.63
PRPF40B-215ENST00000551418 PDIA4P13667 645 aaKnown RBP18.97■□□□□ 0.63
PRPF40B-215ENST00000551418 EIF2DP41214 584 aaKnown RBP18.97■□□□□ 0.63
PRPF40B-215ENST00000551418 WASP42768 502 aa18.97■□□□□ 0.63
PRPF40B-215ENST00000551418 CLDN10P78369 228 aa18.97■□□□□ 0.63
PRPF40B-215ENST00000551418 NCOA4Q13772 614 aa18.97■□□□□ 0.63
PRPF40B-215ENST00000551418 ZNF667Q5HYK9 610 aa18.97■□□□□ 0.63
PRPF40B-215ENST00000551418 SPOPLQ6IQ16 392 aa18.97■□□□□ 0.63
PRPF40B-215ENST00000551418 DDX42Q86XP3 938 aaKnown RBP eCLIP18.97■□□□□ 0.63
PRPF40B-215ENST00000551418 DEFB119Q8N690 84 aa18.97■□□□□ 0.63
PRPF40B-215ENST00000551418 KIAA0895Q8NCT3 520 aa18.97■□□□□ 0.63
PRPF40B-215ENST00000551418 FSCN3Q9NQT6 498 aa18.97■□□□□ 0.63
PRPF40B-215ENST00000551418 DMAC2Q9NW81 257 aa18.97■□□□□ 0.63
PRPF40B-215ENST00000551418 TBC1D14Q9P2M4 693 aa18.97■□□□□ 0.63
PRPF40B-215ENST00000551418 CHD6Q8TD26 2715 aa18.97■□□□□ 0.63
PRPF40B-215ENST00000551418 PLXND1Q9Y4D7 1925 aa18.96■□□□□ 0.63
PRPF40B-215ENST00000551418 PVALEFA0A1B0GWK0 134 aa18.96■□□□□ 0.63
PRPF40B-215ENST00000551418 TCRBV21S2A2A0A5A6 115 aa18.96■□□□□ 0.63
PRPF40B-215ENST00000551418 TBC1D3BA6NDS4 549 aa18.96■□□□□ 0.63
PRPF40B-215ENST00000551418 GREM1O60565 184 aa18.96■□□□□ 0.63
PRPF40B-215ENST00000551418 TNFRSF4P43489 277 aa18.96■□□□□ 0.63
PRPF40B-215ENST00000551418 GAD2Q05329 585 aa18.96■□□□□ 0.63
PRPF40B-215ENST00000551418 PKP1Q13835 747 aa18.96■□□□□ 0.63
PRPF40B-215ENST00000551418 UAP1L1Q3KQV9 507 aa18.96■□□□□ 0.63
PRPF40B-215ENST00000551418 SNX30Q5VWJ9 437 aa18.96■□□□□ 0.63
PRPF40B-215ENST00000551418 RESP18Q5W5W9 173 aa18.96■□□□□ 0.63
PRPF40B-215ENST00000551418 GPRIN1Q7Z2K8 1008 aa18.96■□□□□ 0.63
PRPF40B-215ENST00000551418 C12orf29Q8N999 325 aa18.96■□□□□ 0.63
PRPF40B-215ENST00000551418 PDZD8Q8NEN9 1154 aa18.96■□□□□ 0.63
PRPF40B-215ENST00000551418 OVCA2Q8WZ82 227 aa18.96■□□□□ 0.63
PRPF40B-215ENST00000551418 DMAP1Q9NPF5 467 aaPredicted RBP18.96■□□□□ 0.63
PRPF40B-215ENST00000551418 TMEM9BQ9NQ34 198 aa18.96■□□□□ 0.63
PRPF40B-215ENST00000551418 KRT82Q9NSB4 513 aa18.96■□□□□ 0.63
PRPF40B-215ENST00000551418 OSER1Q9NX31 292 aa18.96■□□□□ 0.63
PRPF40B-215ENST00000551418 BCCIPQ9P287 314 aaKnown RBP eCLIP18.96■□□□□ 0.63
PRPF40B-215ENST00000551418 WASF3Q9UPY6 502 aa18.96■□□□□ 0.63
PRPF40B-215ENST00000551418 SH3BP1Q9Y3L3 701 aa18.96■□□□□ 0.63
PRPF40B-215ENST00000551418 ATXN2Q99700 1313 aaKnown RBP18.96■□□□□ 0.63
PRPF40B-215ENST00000551418 FAM92AA1XBS5 289 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 C1QTNF9BB2RNN3 333 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 MAP3K13O43283 966 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 ALDH1A2O94788 518 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 CLSTN1O94985 981 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 C1QTNF9P0C862 333 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 ME1P48163 572 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 NDST1P52848 882 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 ZNF252P-AS1Q0IIN9 211 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 FOXC1Q12948 553 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 ANO4Q32M45 955 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 EOGTQ5NDL2 527 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 C1orf220Q5T0J3 134 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 DAB2IPQ5VWQ8 1189 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 LPCAT2Q7L5N7 544 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 C11orf74Q86VG3 221 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 PGBD3Q8N328 593 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 SLC2A14Q8TDB8 520 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 WHAMMQ8TF30 809 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 SMARCD1Q96GM5 515 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 ACOX2Q99424 681 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 KCTD10Q9H3F6 313 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 MAGEF1Q9HAY2 307 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 POLMQ9NP87 494 aaPredicted RBP18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 SPHK2Q9NRA0 654 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 FAM49BQ9NUQ9 324 aa18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 CGNQ9P2M7 1197 aaKnown RBP18.95■□□□□ 0.62
PRPF40B-215ENST00000551418 PCNX2A6NKB5 2137 aa18.94■□□□□ 0.62
PRPF40B-215ENST00000551418 HOXC11O43248 304 aaPredicted RBP18.94■□□□□ 0.62
PRPF40B-215ENST00000551418 ACTN4O43707 911 aaKnown RBP18.94■□□□□ 0.62
PRPF40B-215ENST00000551418 ZSCAN22P10073 491 aaPredicted RBP18.94■□□□□ 0.62
PRPF40B-215ENST00000551418 GABRG2P18507 467 aa18.94■□□□□ 0.62
PRPF40B-215ENST00000551418 ITPKAP23677 461 aa18.94■□□□□ 0.62
PRPF40B-215ENST00000551418 MAP3K7CLP57077 242 aa18.94■□□□□ 0.62
PRPF40B-215ENST00000551418 TRIM61Q5EBN2 209 aa18.94■□□□□ 0.62
PRPF40B-215ENST00000551418 ZNF513Q8N8E2 541 aaPredicted RBP18.94■□□□□ 0.62
PRPF40B-215ENST00000551418 DEFB124Q8NES8 71 aa18.94■□□□□ 0.62
PRPF40B-215ENST00000551418 P2RY11Q96G91 374 aa18.94■□□□□ 0.62
PRPF40B-215ENST00000551418 TWNKQ96RR1 684 aa18.94■□□□□ 0.62
PRPF40B-215ENST00000551418 KLF16Q9BXK1 252 aaPredicted RBP18.94■□□□□ 0.62
PRPF40B-215ENST00000551418 NUDT5Q9UKK9 219 aa18.94■□□□□ 0.62
PRPF40B-215ENST00000551418 ATP8B3O60423 1300 aa18.94■□□□□ 0.62
PRPF40B-215ENST00000551418 CACNA1EQ15878 2313 aa18.94■□□□□ 0.62
PRPF40B-215ENST00000551418 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms