RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 CD101Q93033 1021 aa13.77□□□□□ -0.21
NPAS3-209ENST00000551008 JAKMIP2Q96AA8 810 aa13.77□□□□□ -0.21
NPAS3-209ENST00000551008 P2RY11Q96G91 374 aa13.77□□□□□ -0.21
NPAS3-209ENST00000551008 FAXDC2Q96IV6 333 aa13.77□□□□□ -0.21
NPAS3-209ENST00000551008 SCML2Q9UQR0 700 aa13.77□□□□□ -0.21
NPAS3-209ENST00000551008 ABCA7Q8IZY2 2146 aa13.76□□□□□ -0.21
NPAS3-209ENST00000551008 TLR5O60602 858 aa13.76□□□□□ -0.21
NPAS3-209ENST00000551008 KIF11P52732 1056 aa13.76□□□□□ -0.21
NPAS3-209ENST00000551008 GRSF1Q12849 480 aaKnown RBP eCLIP13.76□□□□□ -0.21
NPAS3-209ENST00000551008 DHCR24Q15392 516 aa13.76□□□□□ -0.21
NPAS3-209ENST00000551008 TCERG1LQ5VWI1 586 aa13.76□□□□□ -0.21
NPAS3-209ENST00000551008 HEATR6Q6AI08 1181 aaKnown RBP13.76□□□□□ -0.21
NPAS3-209ENST00000551008 KLHL10Q6JEL2 608 aa13.76□□□□□ -0.21
NPAS3-209ENST00000551008 FOXR2Q6PJQ5 311 aa13.76□□□□□ -0.21
NPAS3-209ENST00000551008 BHLHA9Q7RTU4 235 aa13.76□□□□□ -0.21
NPAS3-209ENST00000551008 TTC30AQ86WT1 665 aa13.76□□□□□ -0.21
NPAS3-209ENST00000551008 BBS7Q8IWZ6 715 aa13.76□□□□□ -0.21
NPAS3-209ENST00000551008 PHTF2Q8N3S3 785 aa13.76□□□□□ -0.21
NPAS3-209ENST00000551008 RUBCNQ92622 972 aa13.76□□□□□ -0.21
NPAS3-209ENST00000551008 DHTKD1Q96HY7 919 aaPredicted RBP13.76□□□□□ -0.21
NPAS3-209ENST00000551008 CEP63Q96MT8 703 aa13.76□□□□□ -0.21
NPAS3-209ENST00000551008 TSG101Q99816 390 aa13.76□□□□□ -0.21
NPAS3-209ENST00000551008 KLF16Q9BXK1 252 aaPredicted RBP13.76□□□□□ -0.21
NPAS3-209ENST00000551008 DUSP16Q9BY84 665 aa13.76□□□□□ -0.21
NPAS3-209ENST00000551008 PNPLA8Q9NP80 782 aa13.76□□□□□ -0.21
NPAS3-209ENST00000551008 PARD6AQ9NPB6 346 aa13.76□□□□□ -0.21
NPAS3-209ENST00000551008 CYLDQ9NQC7 956 aa13.76□□□□□ -0.21
NPAS3-209ENST00000551008 ARMCX3Q9UH62 379 aaPredicted RBP13.76□□□□□ -0.21
NPAS3-209ENST00000551008 USP3Q9Y6I4 520 aa13.76□□□□□ -0.21
NPAS3-209ENST00000551008 PLXND1Q9Y4D7 1925 aa13.76□□□□□ -0.21
NPAS3-209ENST00000551008 NUP205Q92621 2012 aa13.75□□□□□ -0.21
NPAS3-209ENST00000551008 A0A1W2PQH9 124 aa13.75□□□□□ -0.21
NPAS3-209ENST00000551008 E2F8A0AVK6 867 aa13.75□□□□□ -0.21
NPAS3-209ENST00000551008 K7EQS6 105 aa13.75□□□□□ -0.21
NPAS3-209ENST00000551008 TULP2O00295 520 aa13.75□□□□□ -0.21
NPAS3-209ENST00000551008 PSMA7O14818 248 aa13.75□□□□□ -0.21
NPAS3-209ENST00000551008 MDM4O15151 490 aa13.75□□□□□ -0.21
NPAS3-209ENST00000551008 NFATC1O95644 943 aa13.75□□□□□ -0.21
NPAS3-209ENST00000551008 ACO1P21399 889 aaKnown RBP13.75□□□□□ -0.21
NPAS3-209ENST00000551008 DRD1P21728 446 aa13.75□□□□□ -0.21
NPAS3-209ENST00000551008 SLC6A11P48066 632 aa13.75□□□□□ -0.21
NPAS3-209ENST00000551008 PXNP49023 591 aaPredicted RBP13.75□□□□□ -0.21
NPAS3-209ENST00000551008 FMO5P49326 533 aa13.75□□□□□ -0.21
NPAS3-209ENST00000551008 CUL2Q13617 745 aa13.75□□□□□ -0.21
NPAS3-209ENST00000551008 ARHGAP17Q68EM7 881 aa13.75□□□□□ -0.21
NPAS3-209ENST00000551008 NELFBQ8WX92 580 aa13.75□□□□□ -0.21
NPAS3-209ENST00000551008 KAT5Q92993 513 aa13.75□□□□□ -0.21
NPAS3-209ENST00000551008 TMEM176AQ96HP8 235 aa13.75□□□□□ -0.21
NPAS3-209ENST00000551008 ZSWIM1Q9BR11 485 aa13.75□□□□□ -0.21
NPAS3-209ENST00000551008 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.75□□□□□ -0.21
NPAS3-209ENST00000551008 NUDT5Q9UKK9 219 aa13.75□□□□□ -0.21
NPAS3-209ENST00000551008 CTNND2Q9UQB3 1225 aa13.75□□□□□ -0.21
NPAS3-209ENST00000551008 TNRC6BQ9UPQ9 1833 aaKnown RBP13.75□□□□□ -0.21
NPAS3-209ENST00000551008 PMM2O15305 246 aa13.74□□□□□ -0.21
NPAS3-209ENST00000551008 STX10O60499 249 aa13.74□□□□□ -0.21
NPAS3-209ENST00000551008 GABBR2O75899 941 aa13.74□□□□□ -0.21
NPAS3-209ENST00000551008 HNRNPLP14866 589 aaKnown RBP eCLIP13.74□□□□□ -0.21
NPAS3-209ENST00000551008 STX17P56962 302 aa13.74□□□□□ -0.21
NPAS3-209ENST00000551008 LPAL2Q16609 132 aa13.74□□□□□ -0.21
NPAS3-209ENST00000551008 RAB41Q5JT25 222 aa13.74□□□□□ -0.21
NPAS3-209ENST00000551008 LY6G5CQ5SRR4 150 aa13.74□□□□□ -0.21
NPAS3-209ENST00000551008 CCDC186Q7Z3E2 898 aa13.74□□□□□ -0.21
NPAS3-209ENST00000551008 WDR5BQ86VZ2 330 aa13.74□□□□□ -0.21
NPAS3-209ENST00000551008 LONP2Q86WA8 852 aa13.74□□□□□ -0.21
NPAS3-209ENST00000551008 TRIM59Q8IWR1 403 aa13.74□□□□□ -0.21
NPAS3-209ENST00000551008 ETFBKMTQ8IXQ9 262 aa13.74□□□□□ -0.21
NPAS3-209ENST00000551008 KIAA2013Q8IYS2 634 aa13.74□□□□□ -0.21
NPAS3-209ENST00000551008 RPLP0P6Q8NHW5 317 aa13.74□□□□□ -0.21
NPAS3-209ENST00000551008 USP33Q8TEY7 942 aa13.74□□□□□ -0.21
NPAS3-209ENST00000551008 HEXIM2Q96MH2 286 aaKnown RBP13.74□□□□□ -0.21
NPAS3-209ENST00000551008 GTPBP4Q9BZE4 634 aaKnown RBP13.74□□□□□ -0.21
NPAS3-209ENST00000551008 FBXO44Q9H4M3 255 aa13.74□□□□□ -0.21
NPAS3-209ENST00000551008 HOOK1Q9UJC3 728 aaKnown RBP13.74□□□□□ -0.21
NPAS3-209ENST00000551008 HCN2Q9UL51 889 aa13.74□□□□□ -0.21
NPAS3-209ENST00000551008 SPTBN2O15020 2390 aa13.73□□□□□ -0.21
NPAS3-209ENST00000551008 THADAQ6YHU6 1953 aa13.73□□□□□ -0.21
NPAS3-209ENST00000551008 RNF225M0QZC1 329 aaPredicted RBP13.73□□□□□ -0.21
NPAS3-209ENST00000551008 CALCAP01258 141 aa13.73□□□□□ -0.21
NPAS3-209ENST00000551008 IRF1P10914 325 aa13.73□□□□□ -0.21
NPAS3-209ENST00000551008 NRLP54845 237 aa13.73□□□□□ -0.21
NPAS3-209ENST00000551008 MARSP56192 900 aaKnown RBP13.73□□□□□ -0.21
NPAS3-209ENST00000551008 LRMPQ12912 555 aa13.73□□□□□ -0.21
NPAS3-209ENST00000551008 PKDCCQ504Y2 493 aa13.73□□□□□ -0.21
NPAS3-209ENST00000551008 PIGZQ86VD9 579 aa13.73□□□□□ -0.21
NPAS3-209ENST00000551008 DDX42Q86XP3 938 aaKnown RBP eCLIP13.73□□□□□ -0.21
NPAS3-209ENST00000551008 ARHGEF19Q8IW93 802 aa13.73□□□□□ -0.21
NPAS3-209ENST00000551008 CCDC150Q8NCX0 1101 aa13.73□□□□□ -0.21
NPAS3-209ENST00000551008 TFAP2BQ92481 460 aa13.73□□□□□ -0.21
NPAS3-209ENST00000551008 HHIPQ96QV1 700 aa13.73□□□□□ -0.21
NPAS3-209ENST00000551008 FAM124BQ9H5Z6 455 aaPredicted RBP13.73□□□□□ -0.21
NPAS3-209ENST00000551008 TLR8Q9NR97 1041 aaKnown RBP13.73□□□□□ -0.21
NPAS3-209ENST00000551008 O00370 1275 aa13.72□□□□□ -0.21
NPAS3-209ENST00000551008 SLC9A3R1O14745 358 aaPredicted RBP13.72□□□□□ -0.21
NPAS3-209ENST00000551008 TRIM24O15164 1050 aa13.72□□□□□ -0.21
NPAS3-209ENST00000551008 HOXC11O43248 304 aaPredicted RBP13.72□□□□□ -0.21
NPAS3-209ENST00000551008 ADH5P11766 374 aa13.72□□□□□ -0.21
NPAS3-209ENST00000551008 RARGP13631 454 aa13.72□□□□□ -0.21
NPAS3-209ENST00000551008 AMPD2Q01433 879 aa13.72□□□□□ -0.21
NPAS3-209ENST00000551008 PDE4CQ08493 712 aa13.72□□□□□ -0.21
NPAS3-209ENST00000551008 NR1H3Q13133 447 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms