RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 KCTD13Q8WZ19 329 aa27.3■■□□□ 1.96
CPSF6-205ENST00000550075 NELL2Q99435 816 aa27.3■■□□□ 1.96
CPSF6-205ENST00000550075 PLCB1Q9NQ66 1216 aa27.3■■□□□ 1.96
CPSF6-205ENST00000550075 CYLDQ9NQC7 956 aa27.3■■□□□ 1.96
CPSF6-205ENST00000550075 DUS2Q9NX74 493 aaKnown RBP27.3■■□□□ 1.96
CPSF6-205ENST00000550075 SMPD4Q9NXE4 827 aa27.3■■□□□ 1.96
CPSF6-205ENST00000550075 CLIC5Q9NZA1 410 aa27.3■■□□□ 1.96
CPSF6-205ENST00000550075 DAAM1Q9Y4D1 1078 aa27.3■■□□□ 1.96
CPSF6-205ENST00000550075 MIA3Q5JRA6 1907 aa27.29■■□□□ 1.96
CPSF6-205ENST00000550075 A0A1W2PQH9 124 aa27.29■■□□□ 1.96
CPSF6-205ENST00000550075 LGALS16A8MUM7 142 aa27.29■■□□□ 1.96
CPSF6-205ENST00000550075 ZBED1O96006 694 aa27.29■■□□□ 1.96
CPSF6-205ENST00000550075 NUBP1P53384 320 aa27.29■■□□□ 1.96
CPSF6-205ENST00000550075 VCPP55072 806 aaKnown RBP27.29■■□□□ 1.96
CPSF6-205ENST00000550075 PTK2Q05397 1052 aa27.29■■□□□ 1.96
CPSF6-205ENST00000550075 GOLGA8FQ08AF8 430 aa27.29■■□□□ 1.96
CPSF6-205ENST00000550075 GOLGA8DPQ0D2H9 430 aa27.29■■□□□ 1.96
CPSF6-205ENST00000550075 ADIGQ0VDE8 80 aa27.29■■□□□ 1.96
CPSF6-205ENST00000550075 KCNMA1Q12791 1236 aa27.29■■□□□ 1.96
CPSF6-205ENST00000550075 UBXN2BQ14CS0 331 aa27.29■■□□□ 1.96
CPSF6-205ENST00000550075 IER5LQ5T953 404 aa27.29■■□□□ 1.96
CPSF6-205ENST00000550075 KLHDC7AQ5VTJ3 777 aa27.29■■□□□ 1.96
CPSF6-205ENST00000550075 PJA1Q8NG27 643 aa27.29■■□□□ 1.96
CPSF6-205ENST00000550075 OSCP1Q8WVF1 389 aa27.29■■□□□ 1.96
CPSF6-205ENST00000550075 SECISBP2LQ93073 1101 aaKnown RBP27.29■■□□□ 1.96
CPSF6-205ENST00000550075 ATP2A3Q93084 1043 aa27.29■■□□□ 1.96
CPSF6-205ENST00000550075 PRRX2Q99811 253 aa27.29■■□□□ 1.96
CPSF6-205ENST00000550075 FAM83CQ9BQN1 747 aa27.29■■□□□ 1.96
CPSF6-205ENST00000550075 ZSWIM1Q9BR11 485 aa27.29■■□□□ 1.96
CPSF6-205ENST00000550075 FUCA2Q9BTY2 467 aa27.29■■□□□ 1.96
CPSF6-205ENST00000550075 OSBPL6Q9BZF3 934 aa27.29■■□□□ 1.96
CPSF6-205ENST00000550075 KCNH6Q9H252 994 aa27.29■■□□□ 1.96
CPSF6-205ENST00000550075 TULP2O00295 520 aa27.28■■□□□ 1.96
CPSF6-205ENST00000550075 SLC9A3R1O14745 358 aaPredicted RBP27.28■■□□□ 1.96
CPSF6-205ENST00000550075 RARGP13631 454 aa27.28■■□□□ 1.96
CPSF6-205ENST00000550075 COL9A1P20849 921 aa27.28■■□□□ 1.96
CPSF6-205ENST00000550075 ATP5C1P36542 298 aaKnown RBP27.28■■□□□ 1.96
CPSF6-205ENST00000550075 KLHDC10Q6PID8 442 aa27.28■■□□□ 1.96
CPSF6-205ENST00000550075 CPA6Q8N4T0 437 aa27.28■■□□□ 1.96
CPSF6-205ENST00000550075 RIN3Q8TB24 985 aa27.28■■□□□ 1.96
CPSF6-205ENST00000550075 ULBP1Q9BZM6 244 aa27.28■■□□□ 1.96
CPSF6-205ENST00000550075 NMUR1Q9HB89 426 aa27.28■■□□□ 1.96
CPSF6-205ENST00000550075 LTB4R2Q9NPC1 389 aa27.28■■□□□ 1.96
CPSF6-205ENST00000550075 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.28■■□□□ 1.96
CPSF6-205ENST00000550075 CFAP97Q9P2B7 532 aa27.28■■□□□ 1.96
CPSF6-205ENST00000550075 SIT1Q9Y3P8 196 aa27.28■■□□□ 1.96
CPSF6-205ENST00000550075 FHOD1Q9Y613 1164 aa27.28■■□□□ 1.96
CPSF6-205ENST00000550075 F5P12259 2224 aa27.28■■□□□ 1.96
CPSF6-205ENST00000550075 NCAM2O15394 837 aa27.27■■□□□ 1.96
CPSF6-205ENST00000550075 CAVIN2O95810 425 aa27.27■■□□□ 1.96
CPSF6-205ENST00000550075 CALCAP01258 141 aa27.27■■□□□ 1.96
CPSF6-205ENST00000550075 UCHL3P15374 230 aa27.27■■□□□ 1.96
CPSF6-205ENST00000550075 BPIFB4P59827 614 aa27.27■■□□□ 1.96
CPSF6-205ENST00000550075 TPM4P67936 248 aa27.27■■□□□ 1.96
CPSF6-205ENST00000550075 AMPD2Q01433 879 aa27.27■■□□□ 1.96
CPSF6-205ENST00000550075 RUNX3Q13761 415 aa27.27■■□□□ 1.96
CPSF6-205ENST00000550075 C10orf120Q5SQS8 335 aa27.27■■□□□ 1.96
CPSF6-205ENST00000550075 PM20D1Q6GTS8 502 aa27.27■■□□□ 1.96
CPSF6-205ENST00000550075 RALGPS2Q86X27 583 aaPredicted RBP27.27■■□□□ 1.96
CPSF6-205ENST00000550075 ZNF276Q8N554 614 aa27.27■■□□□ 1.96
CPSF6-205ENST00000550075 TMEM105Q8N8V8 129 aa27.27■■□□□ 1.96
CPSF6-205ENST00000550075 SLC35F5Q8WV83 523 aa27.27■■□□□ 1.96
CPSF6-205ENST00000550075 ZNF606Q8WXB4 792 aa27.27■■□□□ 1.96
CPSF6-205ENST00000550075 HSFY1Q96LI6 401 aa27.27■■□□□ 1.96
CPSF6-205ENST00000550075 FOXQ1Q9C009 403 aa27.27■■□□□ 1.96
CPSF6-205ENST00000550075 CNGB3Q9NQW8 809 aa27.27■■□□□ 1.96
CPSF6-205ENST00000550075 GTSE1Q9NYZ3 720 aa27.27■■□□□ 1.96
CPSF6-205ENST00000550075 AJAP1Q9UKB5 411 aaPredicted RBP27.27■■□□□ 1.96
CPSF6-205ENST00000550075 SH3BP1Q9Y3L3 701 aa27.27■■□□□ 1.96
CPSF6-205ENST00000550075 WNT6Q9Y6F9 365 aa27.27■■□□□ 1.96
CPSF6-205ENST00000550075 NFATC1O95644 943 aa27.26■■□□□ 1.95
CPSF6-205ENST00000550075 TNK2Q07912 1038 aa27.26■■□□□ 1.95
CPSF6-205ENST00000550075 DRAP1Q14919 205 aaPredicted RBP27.26■■□□□ 1.95
CPSF6-205ENST00000550075 SCD5Q86SK9 330 aa27.26■■□□□ 1.95
CPSF6-205ENST00000550075 DHX40Q8IX18 779 aaKnown RBP27.26■■□□□ 1.95
CPSF6-205ENST00000550075 SCML4Q8N228 414 aa27.26■■□□□ 1.95
CPSF6-205ENST00000550075 FAM3CQ92520 227 aa27.26■■□□□ 1.95
CPSF6-205ENST00000550075 PCMTD1Q96MG8 357 aaPredicted RBP27.26■■□□□ 1.95
CPSF6-205ENST00000550075 HSD3B7Q9H2F3 369 aa27.26■■□□□ 1.95
CPSF6-205ENST00000550075 EBF3Q9H4W6 596 aa27.26■■□□□ 1.95
CPSF6-205ENST00000550075 DNMT3LQ9UJW3 386 aa27.26■■□□□ 1.95
CPSF6-205ENST00000550075 E2F8A0AVK6 867 aa27.25■■□□□ 1.95
CPSF6-205ENST00000550075 LRRC10BA6NIK2 292 aa27.25■■□□□ 1.95
CPSF6-205ENST00000550075 SPECC1L-ADORA2AF8WAN1 911 aa27.25■■□□□ 1.95
CPSF6-205ENST00000550075 MAGEA9P43362 315 aa27.25■■□□□ 1.95
CPSF6-205ENST00000550075 PGFP49763 221 aa27.25■■□□□ 1.95
CPSF6-205ENST00000550075 RGS7P49802 495 aa27.25■■□□□ 1.95
CPSF6-205ENST00000550075 YWHAGP61981 247 aaKnown RBP eCLIP27.25■■□□□ 1.95
CPSF6-205ENST00000550075 UBXN1Q04323 297 aa27.25■■□□□ 1.95
CPSF6-205ENST00000550075 NR1H3Q13133 447 aa27.25■■□□□ 1.95
CPSF6-205ENST00000550075 ZSCAN23Q3MJ62 389 aa27.25■■□□□ 1.95
CPSF6-205ENST00000550075 TRIM68Q6AZZ1 485 aa27.25■■□□□ 1.95
CPSF6-205ENST00000550075 RSRC2Q7L4I2 434 aaKnown RBP27.25■■□□□ 1.95
CPSF6-205ENST00000550075 FAM71AQ8IYT1 594 aa27.25■■□□□ 1.95
CPSF6-205ENST00000550075 EXOC4Q96A65 974 aa27.25■■□□□ 1.95
CPSF6-205ENST00000550075 HPS4Q9NQG7 708 aa27.25■■□□□ 1.95
CPSF6-205ENST00000550075 OSER1Q9NX31 292 aa27.25■■□□□ 1.95
CPSF6-205ENST00000550075 TBC1D14Q9P2M4 693 aa27.25■■□□□ 1.95
CPSF6-205ENST00000550075 FOXN3O00409 490 aaPredicted RBP27.24■■□□□ 1.95
CPSF6-205ENST00000550075 FBXO21O94952 628 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms