RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 TEX101Q9BY14 249 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 TRIM5Q9C035 493 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 PABPC3Q9H361 631 aaKnown RBP4.84□□□□□ -1.63
SNRPF-202ENST00000549580 MLXIPQ9HAP2 919 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 RNF7Q9UBF6 113 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 FRMD4BQ9Y2L6 1034 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 NEU2Q9Y3R4 380 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 J3KRW8 73 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 LEFTY2O00292 366 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 COQ9O75208 318 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 PIAS2O75928 621 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 NCR1O76036 304 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 RECQL4O94761 1208 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 SUN1O94901 812 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 ARP10275 920 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 CKMT1AP12532 417 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 CHRM3P20309 590 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 SATB1Q01826 763 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 KRT17Q04695 432 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 MYO1EQ12965 1108 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 ATP1A4Q13733 1029 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 TAF12Q16514 161 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 SLC4A8Q2Y0W8 1093 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 SLC30A10Q6XR72 485 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 HERC6Q8IVU3 1022 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 SLC44A2Q8IWA5 706 aaPredicted RBP4.83□□□□□ -1.64
SNRPF-202ENST00000549580 FTSJ3Q8IY81 847 aaKnown RBP4.83□□□□□ -1.64
SNRPF-202ENST00000549580 COLGALT2Q8IYK4 626 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 SIMC1Q8NDZ2 872 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 PPHLN1Q8NEY8 458 aaKnown RBP4.83□□□□□ -1.64
SNRPF-202ENST00000549580 OR56A1Q8NGH5 318 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 SCARB1Q8WTV0 552 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 ZDHHC12Q96GR4 267 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 SMOC2Q9H3U7 446 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 RNPEPQ9H4A4 650 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 SAYSD1Q9NPB0 183 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 PRDM8Q9NQV8 689 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 HELLSQ9NRZ9 838 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 TRPM5Q9NZQ8 1165 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 TMOD4Q9NZQ9 345 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 KIF17Q9P2E2 1029 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 HPSEQ9Y251 543 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 CRYL1Q9Y2S2 319 aa4.83□□□□□ -1.64
SNRPF-202ENST00000549580 COL3A1P02461 1466 aaPredicted RBP4.82□□□□□ -1.64
SNRPF-202ENST00000549580 SETD1BQ9UPS6 1966 aaKnown RBP4.82□□□□□ -1.64
SNRPF-202ENST00000549580 SPATA31A3Q5VYP0 1347 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 A0A1B0GTW7 788 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 MYADML2A6NDP7 307 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 TMEM200CA6NKL6 621 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 B9A039 149 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 FCHO1O14526 889 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 TRIM24O15164 1050 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 CD3EAPO15446 510 aaKnown RBP4.82□□□□□ -1.64
SNRPF-202ENST00000549580 DHHO43323 396 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 EPB41L2O43491 1005 aaKnown RBP4.82□□□□□ -1.64
SNRPF-202ENST00000549580 ACTL6BO94805 426 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 NDUFA10O95299 355 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 SPATA31D3P0C874 917 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 KCNA2P16389 499 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 FGFR4P22455 802 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 PXNP49023 591 aaPredicted RBP4.82□□□□□ -1.64
SNRPF-202ENST00000549580 ANXA11P50995 505 aaKnown RBP4.82□□□□□ -1.64
SNRPF-202ENST00000549580 SEC24CP53992 1094 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 TAP1Q03518 808 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 LMOD3Q0VAK6 560 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 DDX10Q13206 875 aaKnown RBP4.82□□□□□ -1.64
SNRPF-202ENST00000549580 FAM110CQ1W6H9 321 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 CACHD1Q5VU97 1274 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 KLHL17Q6TDP4 642 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 LAYNQ6UX15 382 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 SPATA31D4Q6ZUB0 917 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 BOLLQ8N9W6 283 aaKnown RBP4.82□□□□□ -1.64
SNRPF-202ENST00000549580 SLC30A5Q8TAD4 765 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 PPP2R3CQ969Q6 453 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 SDCCAG3Q96C92 435 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 ZNF668Q96K58 619 aaPredicted RBP4.82□□□□□ -1.64
SNRPF-202ENST00000549580 RTKNQ9BST9 563 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 CXorf36Q9H7Y0 433 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 MAP3K20Q9NYL2 800 aaKnown RBP4.82□□□□□ -1.64
SNRPF-202ENST00000549580 LPAR3Q9UBY5 353 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 VPS51Q9UID3 782 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 CHST2Q9Y4C5 530 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 INSL6Q9Y581 213 aa4.82□□□□□ -1.64
SNRPF-202ENST00000549580 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.82□□□□□ -1.64
SNRPF-202ENST00000549580 A0A1W2PS29 197 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 UNC119BA6NIH7 251 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 DIRC3C9JPN6 131 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 hCG_1984214I3L0E3 225 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 DNPH1O43598 174 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 RASAL1O95294 804 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 ANXA6P08133 673 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 PPIFP30405 207 aaKnown RBP4.81□□□□□ -1.64
SNRPF-202ENST00000549580 AP2B1P63010 937 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 MC2RQ01718 297 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 OCA2Q04671 838 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 PTCHD3Q3KNS1 767 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 ADCK5Q3MIX3 580 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 TRIM60Q495X7 471 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 ABLIM2Q6H8Q1 611 aa4.81□□□□□ -1.64
SNRPF-202ENST00000549580 TMEM108Q6UXF1 575 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms