RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 KIR2DL1P43626 348 aaPredicted RBP14.99□□□□□ -0.01
PTCH1-217ENST00000548420 POSTNQ15063 836 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 PREPLQ4J6C6 727 aaPredicted RBP14.99□□□□□ -0.01
PTCH1-217ENST00000548420 C4orf17Q53FE4 359 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 CRELD2Q6UXH1 353 aaPredicted RBP14.99□□□□□ -0.01
PTCH1-217ENST00000548420 UNC13DQ70J99 1090 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 EPM2AIP1Q7L775 607 aaPredicted RBP14.99□□□□□ -0.01
PTCH1-217ENST00000548420 RGL4Q8IZJ4 473 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 C18orf25Q96B23 403 aaPredicted RBP14.99□□□□□ -0.01
PTCH1-217ENST00000548420 TMEM176AQ96HP8 235 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 MSTO1Q9BUK6 570 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 ZDHHC5Q9C0B5 715 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 GMIPQ9P107 970 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 CALCOCO1Q9P1Z2 691 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 USP25Q9UHP3 1055 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 SERTAD1Q9UHV2 236 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 PCDHB8Q9UN66 801 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 NUB1Q9Y5A7 615 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.99□□□□□ -0.01
PTCH1-217ENST00000548420 MYOFQ9NZM1 2061 aa14.98□□□□□ -0.01
PTCH1-217ENST00000548420 LACTBL1A8MY62 500 aa14.98□□□□□ -0.01
PTCH1-217ENST00000548420 FLRT2O43155 660 aa14.98□□□□□ -0.01
PTCH1-217ENST00000548420 TNFSF14O43557 240 aa14.98□□□□□ -0.01
PTCH1-217ENST00000548420 GCNT3O95395 438 aa14.98□□□□□ -0.01
PTCH1-217ENST00000548420 CYP3A5P20815 502 aa14.98□□□□□ -0.01
PTCH1-217ENST00000548420 HOXD13P35453 343 aa14.98□□□□□ -0.01
PTCH1-217ENST00000548420 SLC6A11P48066 632 aa14.98□□□□□ -0.01
PTCH1-217ENST00000548420 ASIC1P78348 528 aa14.98□□□□□ -0.01
PTCH1-217ENST00000548420 ZNF77Q15935 545 aa14.98□□□□□ -0.01
PTCH1-217ENST00000548420 C6orf118Q5T5N4 469 aa14.98□□□□□ -0.01
PTCH1-217ENST00000548420 ZNF574Q6ZN55 896 aaPredicted RBP14.98□□□□□ -0.01
PTCH1-217ENST00000548420 CD302Q8IX05 232 aa14.98□□□□□ -0.01
PTCH1-217ENST00000548420 EFCAB13Q8IY85 973 aa14.98□□□□□ -0.01
PTCH1-217ENST00000548420 APPL2Q8NEU8 664 aa14.98□□□□□ -0.01
PTCH1-217ENST00000548420 ZNF507Q8TCN5 953 aa14.98□□□□□ -0.01
PTCH1-217ENST00000548420 PAGE5Q96GU1 130 aa14.98□□□□□ -0.01
PTCH1-217ENST00000548420 FAM124BQ9H5Z6 455 aaPredicted RBP14.98□□□□□ -0.01
PTCH1-217ENST00000548420 RPF1Q9H9Y2 349 aaKnown RBP14.98□□□□□ -0.01
PTCH1-217ENST00000548420 KIF9Q9HAQ2 790 aa14.98□□□□□ -0.01
PTCH1-217ENST00000548420 AGO2Q9UKV8 859 aaKnown RBP14.98□□□□□ -0.01
PTCH1-217ENST00000548420 EXOC7Q9UPT5 735 aa14.98□□□□□ -0.01
PTCH1-217ENST00000548420 ITPR2Q14571 2701 aa14.98□□□□□ -0.01
PTCH1-217ENST00000548420 EIF3DO15371 548 aaKnown RBP eCLIP14.97□□□□□ -0.01
PTCH1-217ENST00000548420 KLRC4O43908 158 aa14.97□□□□□ -0.01
PTCH1-217ENST00000548420 BRINP1O60477 761 aa14.97□□□□□ -0.01
PTCH1-217ENST00000548420 PRPF6O94906 941 aaKnown RBP14.97□□□□□ -0.01
PTCH1-217ENST00000548420 GARTP22102 1010 aa14.97□□□□□ -0.01
PTCH1-217ENST00000548420 CASP1P29466 404 aa14.97□□□□□ -0.01
PTCH1-217ENST00000548420 LRPAP1P30533 357 aa14.97□□□□□ -0.01
PTCH1-217ENST00000548420 MCM4P33991 863 aa14.97□□□□□ -0.01
PTCH1-217ENST00000548420 TARDBPQ13148 414 aaKnown RBP eCLIP14.97□□□□□ -0.01
PTCH1-217ENST00000548420 CUL4BQ13620 913 aa14.97□□□□□ -0.01
PTCH1-217ENST00000548420 UBAP2LQ14157 1087 aaKnown RBP14.97□□□□□ -0.01
PTCH1-217ENST00000548420 HLA-BQ31612 363 aa14.97□□□□□ -0.01
PTCH1-217ENST00000548420 HIST2H2BCQ6DN03 193 aa14.97□□□□□ -0.01
PTCH1-217ENST00000548420 ITIH5Q86UX2 942 aa14.97□□□□□ -0.01
PTCH1-217ENST00000548420 GIPC2Q8TF65 315 aa14.97□□□□□ -0.01
PTCH1-217ENST00000548420 ATP2A3Q93084 1043 aa14.97□□□□□ -0.01
PTCH1-217ENST00000548420 HPS3Q969F9 1004 aa14.97□□□□□ -0.01
PTCH1-217ENST00000548420 SLC22A12Q96S37 553 aa14.97□□□□□ -0.01
PTCH1-217ENST00000548420 NRSN2Q9GZP1 204 aa14.97□□□□□ -0.01
PTCH1-217ENST00000548420 ASB7Q9H672 318 aa14.97□□□□□ -0.01
PTCH1-217ENST00000548420 TMEM206Q9H813 350 aa14.97□□□□□ -0.01
PTCH1-217ENST00000548420 DERAQ9Y315 318 aa14.97□□□□□ -0.01
PTCH1-217ENST00000548420 PCDHGB2Q9Y5G2 931 aa14.97□□□□□ -0.01
PTCH1-217ENST00000548420 TMEM131Q92545 1883 aa14.97□□□□□ -0.01
PTCH1-217ENST00000548420 JUPP14923 745 aa14.96□□□□□ -0.01
PTCH1-217ENST00000548420 AFMP43652 599 aa14.96□□□□□ -0.01
PTCH1-217ENST00000548420 ACOT2P49753 483 aa14.96□□□□□ -0.01
PTCH1-217ENST00000548420 NDUFA8P51970 172 aa14.96□□□□□ -0.01
PTCH1-217ENST00000548420 NLRP12P59046 1061 aa14.96□□□□□ -0.01
PTCH1-217ENST00000548420 NFKB2Q00653 900 aa14.96□□□□□ -0.01
PTCH1-217ENST00000548420 YWHAHQ04917 246 aaPredicted RBP14.96□□□□□ -0.01
PTCH1-217ENST00000548420 PPP2R3AQ06190 1150 aa14.96□□□□□ -0.01
PTCH1-217ENST00000548420 ZNF268Q14587 947 aaPredicted RBP14.96□□□□□ -0.01
PTCH1-217ENST00000548420 EOGTQ5NDL2 527 aa14.96□□□□□ -0.01
PTCH1-217ENST00000548420 FAM26FQ5R3K3 315 aa14.96□□□□□ -0.01
PTCH1-217ENST00000548420 SPATA1Q5VX52 437 aa14.96□□□□□ -0.01
PTCH1-217ENST00000548420 GRAMD1CQ8IYS0 662 aa14.96□□□□□ -0.01
PTCH1-217ENST00000548420 CEP57L1Q8IYX8 460 aa14.96□□□□□ -0.01
PTCH1-217ENST00000548420 POMGNT1Q8WZA1 660 aa14.96□□□□□ -0.01
PTCH1-217ENST00000548420 TSC1Q92574 1164 aa14.96□□□□□ -0.01
PTCH1-217ENST00000548420 NAF1Q96HR8 494 aaKnown RBP14.96□□□□□ -0.01
PTCH1-217ENST00000548420 BLZF1Q9H2G9 400 aa14.96□□□□□ -0.01
PTCH1-217ENST00000548420 GDPD2Q9HCC8 539 aa14.96□□□□□ -0.01
PTCH1-217ENST00000548420 SUSD2Q9UGT4 822 aa14.96□□□□□ -0.01
PTCH1-217ENST00000548420 UBQLN1Q9UMX0 589 aaKnown RBP14.96□□□□□ -0.01
PTCH1-217ENST00000548420 CYP8B1Q9UNU6 501 aa14.96□□□□□ -0.01
PTCH1-217ENST00000548420 PAXBP1Q9Y5B6 917 aa14.96□□□□□ -0.01
PTCH1-217ENST00000548420 M0QZQ0 153 aa14.95□□□□□ -0.02
PTCH1-217ENST00000548420 MYL1P05976 194 aa14.95□□□□□ -0.02
PTCH1-217ENST00000548420 MYF5P13349 255 aa14.95□□□□□ -0.02
PTCH1-217ENST00000548420 HMGA1P17096 107 aaKnown RBP14.95□□□□□ -0.02
PTCH1-217ENST00000548420 CR2P20023 1033 aa14.95□□□□□ -0.02
PTCH1-217ENST00000548420 MATKP42679 507 aa14.95□□□□□ -0.02
PTCH1-217ENST00000548420 SYKP43405 635 aa14.95□□□□□ -0.02
PTCH1-217ENST00000548420 IFNAR2P48551 515 aa14.95□□□□□ -0.02
PTCH1-217ENST00000548420 SPAG1Q07617 926 aa14.95□□□□□ -0.02
PTCH1-217ENST00000548420 NFATC3Q12968 1075 aa14.95□□□□□ -0.02
PTCH1-217ENST00000548420 USP4Q13107 963 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms