RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 SLC47A2Q86VL8 602 aa12.76□□□□□ -0.37
HDAC7-226ENST00000547259 CRYBG2Q8N1P7 616 aa12.76□□□□□ -0.37
HDAC7-226ENST00000547259 SPEM1Q8N4L4 309 aa12.76□□□□□ -0.37
HDAC7-226ENST00000547259 OR8K1Q8NGG5 319 aa12.76□□□□□ -0.37
HDAC7-226ENST00000547259 ZSCAN18Q8TBC5 510 aaPredicted RBP12.76□□□□□ -0.37
HDAC7-226ENST00000547259 SYN2Q92777 582 aaPredicted RBP12.76□□□□□ -0.37
HDAC7-226ENST00000547259 MYLPFQ96A32 169 aa12.76□□□□□ -0.37
HDAC7-226ENST00000547259 TCEAL4Q96EI5 215 aa12.76□□□□□ -0.37
HDAC7-226ENST00000547259 MED10Q9BTT4 135 aa12.76□□□□□ -0.37
HDAC7-226ENST00000547259 ZCWPW1Q9H0M4 648 aa12.76□□□□□ -0.37
HDAC7-226ENST00000547259 CRTAC1Q9NQ79 661 aa12.76□□□□□ -0.37
HDAC7-226ENST00000547259 ZNHIT6Q9NWK9 470 aaKnown RBP12.76□□□□□ -0.37
HDAC7-226ENST00000547259 USP18Q9UMW8 372 aa12.76□□□□□ -0.37
HDAC7-226ENST00000547259 MYBPHLA2RUH7 354 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 DPYSL4O14531 572 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 MED7O43513 233 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 ATP8B3O60423 1300 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 RETP07949 1114 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 VDRP11473 427 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 CCDC130P13994 396 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 CYP11B1P15538 503 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 ADORA2BP29275 332 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 GSDMDP57764 484 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 CYP27A1Q02318 531 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 KLHL30Q0D2K2 578 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 GPR17Q13304 367 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 CCDC142Q17RM4 750 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 ARHGAP29Q52LW3 1261 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 ARHGAP15Q53QZ3 475 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 E4F1Q66K89 784 aaPredicted RBP12.75□□□□□ -0.37
HDAC7-226ENST00000547259 VITQ6UXI7 678 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 C4orf50Q6ZRC1 276 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 SPATA2LQ8IUW3 424 aaPredicted RBP12.75□□□□□ -0.37
HDAC7-226ENST00000547259 ZNF687Q8N1G0 1237 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 SYNPOQ8N3V7 929 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 C12orf29Q8N999 325 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 TC2NQ8N9U0 490 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 MYCBPAPQ8TBZ2 947 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 DNAJC7Q99615 494 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 LPIN3Q9BQK8 851 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 ACP6Q9NPH0 428 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 OBP2AQ9NY56 170 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 AIPL1Q9NZN9 384 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 GTF3C4Q9UKN8 822 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 KIAA1257Q9ULG3 409 aa12.75□□□□□ -0.37
HDAC7-226ENST00000547259 MYO16Q9Y6X6 1858 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 HEPACAM2A8MVW5 462 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 PAPSS2O95340 614 aaPredicted RBP12.74□□□□□ -0.37
HDAC7-226ENST00000547259 SERPING1P05155 500 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 PTMAP06454 111 aaKnown RBP12.74□□□□□ -0.37
HDAC7-226ENST00000547259 WEE1P30291 646 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 CCR2P41597 374 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 TUFMP49411 452 aaKnown RBP12.74□□□□□ -0.37
HDAC7-226ENST00000547259 CDR1P51861 262 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 KPNA1P52294 538 aaPredicted RBP12.74□□□□□ -0.37
HDAC7-226ENST00000547259 ATXN1P54253 815 aaKnown RBP12.74□□□□□ -0.37
HDAC7-226ENST00000547259 FCHO2Q0JRZ9 810 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 CCDC173Q0VFZ6 552 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 SMARCB1Q12824 385 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 ARID5BQ14865 1188 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 STILQ15468 1287 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 NFE2Q16621 373 aaPredicted RBP12.74□□□□□ -0.37
HDAC7-226ENST00000547259 GOLGA7BQ2TAP0 167 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 PPP1R26Q5T8A7 1209 aaPredicted RBP12.74□□□□□ -0.37
HDAC7-226ENST00000547259 TAF3Q5VWG9 929 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 FAM171BQ6P995 826 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 TSSK4Q6SA08 328 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 RNF19BQ6ZMZ0 732 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 CCDC186Q7Z3E2 898 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 NOP9Q86U38 636 aaKnown RBP12.74□□□□□ -0.37
HDAC7-226ENST00000547259 RALGPS2Q86X27 583 aaPredicted RBP12.74□□□□□ -0.37
HDAC7-226ENST00000547259 SLC2A14Q8TDB8 520 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 EPS8L1Q8TE68 723 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 SLC20A1Q8WUM9 679 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 TFAP2BQ92481 460 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 DDX1Q92499 740 aaKnown RBP12.74□□□□□ -0.37
HDAC7-226ENST00000547259 CYFIP2Q96F07 1278 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 PCED1BQ96HM7 432 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 PGLYRP2Q96PD5 576 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 PKMYT1Q99640 499 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 PDCL3Q9H2J4 239 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 TMLHEQ9NVH6 421 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 ABI2Q9NYB9 513 aaPredicted RBP12.74□□□□□ -0.37
HDAC7-226ENST00000547259 YIPF1Q9Y548 306 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 PCDHB5Q9Y5E4 795 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 CHD8Q9HCK8 2581 aa12.74□□□□□ -0.37
HDAC7-226ENST00000547259 SDK1Q7Z5N4 2213 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 ZNF638Q14966 1978 aaKnown RBP12.73□□□□□ -0.37
HDAC7-226ENST00000547259 MTMR11A4FU01 709 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 M0QYV0 167 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 O00370 1275 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 CLDN5O00501 218 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 CHRNB1P11230 501 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 SKILP12757 684 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 HNRNPH3P31942 346 aaKnown RBP12.73□□□□□ -0.37
HDAC7-226ENST00000547259 VIPR2P41587 438 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 PRKCIP41743 596 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 VEPH1Q14D04 833 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 TEAD2Q15562 447 aa12.73□□□□□ -0.37
HDAC7-226ENST00000547259 ARHGAP17Q68EM7 881 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms