RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 RALAP11233 206 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 LAMP2P13473 410 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 LCP1P13796 627 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 SSTR3P32745 418 aaPredicted RBP12.34□□□□□ -0.43
SNHG1-221ENST00000544983 CCR2P41597 374 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 RGS7P49802 495 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 ADKP55263 362 aaKnown RBP12.34□□□□□ -0.43
SNHG1-221ENST00000544983 GSCP56915 257 aaPredicted RBP12.34□□□□□ -0.43
SNHG1-221ENST00000544983 DAOAP59103 153 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 NTHL1P78549 312 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 IFRD2Q12894 506 aaPredicted RBP12.34□□□□□ -0.43
SNHG1-221ENST00000544983 ZNF268Q14587 947 aaPredicted RBP12.34□□□□□ -0.43
SNHG1-221ENST00000544983 SLC5A9Q2M3M2 681 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 HECTD3Q5T447 861 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 NAA35Q5VZE5 725 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 ACAD10Q6JQN1 1059 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 WDR59Q6PJI9 974 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 MTSS1LQ765P7 747 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 ARCQ7LC44 396 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 PHF13Q86YI8 300 aaPredicted RBP12.34□□□□□ -0.43
SNHG1-221ENST00000544983 ADHFE1Q8IWW8 467 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 SCUBE3Q8IX30 993 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 NPAS3Q8IXF0 933 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 ZDHHC14Q8IZN3 488 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 KIAA1958Q8N8K9 716 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 TC2NQ8N9U0 490 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 TDRD5Q8NAT2 981 aaKnown RBP12.34□□□□□ -0.43
SNHG1-221ENST00000544983 SLC30A5Q8TAD4 765 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 ITFG1Q8TB96 612 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 TCEAL4Q96EI5 215 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 TRIM11Q96F44 468 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 CPXM1Q96SM3 734 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 ULBP1Q9BZM6 244 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 SLITRK6Q9H5Y7 841 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 TRPV4Q9HBA0 871 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 ABCC13Q9NSE7 274 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 GMIPQ9P107 970 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 CHORDC1Q9UHD1 332 aaPredicted RBP12.34□□□□□ -0.43
SNHG1-221ENST00000544983 CYTH4Q9UIA0 394 aa12.34□□□□□ -0.43
SNHG1-221ENST00000544983 NCOR1O75376 2440 aa12.33□□□□□ -0.43
SNHG1-221ENST00000544983 TRAV19A0A0A6YYK7 116 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 RTN2O75298 545 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 MOSPD3O75425 235 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 TADA3O75528 432 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 SKILP12757 684 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 CEBPBP17676 345 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 GBP2P32456 591 aaPredicted RBP12.33□□□□□ -0.44
SNHG1-221ENST00000544983 AVPR1AP37288 418 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 YWHAGP61981 247 aaKnown RBP eCLIP12.33□□□□□ -0.44
SNHG1-221ENST00000544983 TEAD2Q15562 447 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 PTPN20Q4JDL3 420 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 GPR158Q5T848 1215 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 GET4Q7L5D6 327 aaPredicted RBP12.33□□□□□ -0.44
SNHG1-221ENST00000544983 SLC26A9Q7LBE3 791 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 DDX42Q86XP3 938 aaKnown RBP eCLIP12.33□□□□□ -0.447e-6■■■□□ 16.5
SNHG1-221ENST00000544983 TMTC1Q8IUR5 882 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 CCDC170Q8IYT3 715 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 CMTM8Q8IZV2 173 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 CPA5Q8WXQ8 436 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 SMARCD2Q92925 531 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 CCDC42Q96M95 316 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 PCDHB18PQ96TA0 734 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.33□□□□□ -0.44
SNHG1-221ENST00000544983 DEF6Q9H4E7 631 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 KIF9Q9HAQ2 790 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 OBP2AQ9NY56 170 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 ADAM22Q9P0K1 906 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 ARHGAP20Q9P2F6 1191 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 ADAMTS1Q9UHI8 967 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 NAGPAQ9UK23 515 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 DENND4AQ7Z401 1863 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 DENND4CQ5VZ89 1909 aa12.33□□□□□ -0.44
SNHG1-221ENST00000544983 XIRP2A4UGR9 3374 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 A0A1W2PQH9 124 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 DDX3XO00571 662 aaKnown RBP eCLIP12.32□□□□□ -0.44
SNHG1-221ENST00000544983 PAPSS1O43252 624 aaPredicted RBP12.32□□□□□ -0.44
SNHG1-221ENST00000544983 TLR5O60602 858 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 HSF2BPO75031 334 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 GABBR2O75899 941 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 OLFM2O95897 454 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 ABL1P00519 1130 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 OAS1P00973 400 aaKnown RBP12.32□□□□□ -0.44
SNHG1-221ENST00000544983 LTFP02788 710 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 MYBL1P10243 752 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 BMP1P13497 986 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 TCF3P15923 654 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 HDCP19113 662 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 FECHP22830 423 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 ATP5C1P36542 298 aaKnown RBP12.32□□□□□ -0.44
SNHG1-221ENST00000544983 KPNA1P52294 538 aaPredicted RBP12.32□□□□□ -0.44
SNHG1-221ENST00000544983 YWHAZP63104 245 aaKnown RBP12.32□□□□□ -0.44
SNHG1-221ENST00000544983 SLC6A3Q01959 620 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 SLC18A3Q16572 532 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 C10orf76Q5T2E6 689 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 BSPRYQ5W0U4 402 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 BTBD8Q5XKL5 378 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 MON1BQ7L1V2 547 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 SCD5Q86SK9 330 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 RNF139Q8WU17 664 aa12.32□□□□□ -0.44
SNHG1-221ENST00000544983 ASB16Q96NS5 453 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms