RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 TSHRP16473 764 aa6□□□□□ -1.45
VPS50-220ENST00000544910 CYLC2Q14093 348 aaPredicted RBP6□□□□□ -1.45
VPS50-220ENST00000544910 DPYSL3Q14195 570 aa6□□□□□ -1.45
VPS50-220ENST00000544910 HIC1Q14526 733 aa6□□□□□ -1.45
VPS50-220ENST00000544910 AMHR2Q16671 573 aa6□□□□□ -1.45
VPS50-220ENST00000544910 POLNQ7Z5Q5 900 aa6□□□□□ -1.45
VPS50-220ENST00000544910 PRPF39Q86UA1 669 aaKnown RBP6□□□□□ -1.45
VPS50-220ENST00000544910 SLC7A14Q8TBB6 771 aa6□□□□□ -1.45
VPS50-220ENST00000544910 OPTNQ96CV9 577 aa6□□□□□ -1.45
VPS50-220ENST00000544910 NIFKQ9BYG3 293 aaKnown RBP6□□□□□ -1.45
VPS50-220ENST00000544910 ASCC2Q9H1I8 757 aaPredicted RBP6□□□□□ -1.45
VPS50-220ENST00000544910 MRPL46Q9H2W6 279 aaKnown RBP6□□□□□ -1.45
VPS50-220ENST00000544910 ABCF3Q9NUQ8 709 aa6□□□□□ -1.45
VPS50-220ENST00000544910 SLC38A7Q9NVC3 462 aa6□□□□□ -1.45
VPS50-220ENST00000544910 NSMCE4AQ9NXX6 385 aa6□□□□□ -1.45
VPS50-220ENST00000544910 AP4E1Q9UPM8 1137 aa6□□□□□ -1.45
VPS50-220ENST00000544910 ZNF536O15090 1300 aa6□□□□□ -1.45
VPS50-220ENST00000544910 MYH4Q9Y623 1939 aa6□□□□□ -1.45
VPS50-220ENST00000544910 SNX3O60493 162 aa6□□□□□ -1.45
VPS50-220ENST00000544910 HMGCRP04035 888 aa6□□□□□ -1.45
VPS50-220ENST00000544910 CYP2C9P11712 490 aa6□□□□□ -1.45
VPS50-220ENST00000544910 MIPP30301 263 aa6□□□□□ -1.45
VPS50-220ENST00000544910 ICAM3P32942 547 aa6□□□□□ -1.45
VPS50-220ENST00000544910 KDSRQ06136 332 aa6□□□□□ -1.45
VPS50-220ENST00000544910 R3HDM1Q15032 1099 aaKnown RBP6□□□□□ -1.45
VPS50-220ENST00000544910 TCEAL1Q15170 157 aa6□□□□□ -1.45
VPS50-220ENST00000544910 MROH9Q5TGP6 573 aa6□□□□□ -1.45
VPS50-220ENST00000544910 PPWD1Q96BP3 646 aaKnown RBP6□□□□□ -1.45
VPS50-220ENST00000544910 HDAC11Q96DB2 347 aa6□□□□□ -1.45
VPS50-220ENST00000544910 ATXN7L3BQ96GX2 97 aa6□□□□□ -1.45
VPS50-220ENST00000544910 FAM210AQ96ND0 272 aa6□□□□□ -1.45
VPS50-220ENST00000544910 DCDC2Q9UHG0 476 aa6□□□□□ -1.45
VPS50-220ENST00000544910 ENO4A6NNW6 628 aa6□□□□□ -1.45
VPS50-220ENST00000544910 CXCL11O14625 94 aa6□□□□□ -1.45
VPS50-220ENST00000544910 CHADO15335 359 aa6□□□□□ -1.45
VPS50-220ENST00000544910 ATP9BO43861 1147 aa6□□□□□ -1.45
VPS50-220ENST00000544910 GLRA3O75311 464 aa6□□□□□ -1.45
VPS50-220ENST00000544910 NFICP08651 508 aa6□□□□□ -1.45
VPS50-220ENST00000544910 INSRRP14616 1297 aa6□□□□□ -1.45
VPS50-220ENST00000544910 BGNP21810 368 aa6□□□□□ -1.45
VPS50-220ENST00000544910 ELK3P41970 407 aa6□□□□□ -1.45
VPS50-220ENST00000544910 GRIK4Q16099 956 aa6□□□□□ -1.45
VPS50-220ENST00000544910 ATP13A4Q4VNC1 1196 aa6□□□□□ -1.45
VPS50-220ENST00000544910 DCAF6Q58WW2 860 aa6□□□□□ -1.45
VPS50-220ENST00000544910 ZDHHC24Q6UX98 284 aa6□□□□□ -1.45
VPS50-220ENST00000544910 MTDHQ86UE4 582 aaKnown RBP6□□□□□ -1.45
VPS50-220ENST00000544910 ADGRF2Q8IZF7 708 aa6□□□□□ -1.45
VPS50-220ENST00000544910 FUKQ8N0W3 1084 aa6□□□□□ -1.45
VPS50-220ENST00000544910 CRYGNQ8WXF5 182 aa6□□□□□ -1.45
VPS50-220ENST00000544910 TBCBQ99426 244 aa6□□□□□ -1.45
VPS50-220ENST00000544910 PDP2Q9P2J9 529 aa6□□□□□ -1.45
VPS50-220ENST00000544910 HEY2Q9UBP5 337 aa6□□□□□ -1.45
VPS50-220ENST00000544910 G3BP2Q9UN86 482 aaKnown RBP6□□□□□ -1.45
VPS50-220ENST00000544910 GOLGA8CPA6NN73 597 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 KBTBD13C9JR72 458 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 E7ENQ6 273 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 DYNC1LI2O43237 492 aaPredicted RBP5.99□□□□□ -1.45
VPS50-220ENST00000544910 KLHL2O95198 593 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 KCNA4P22459 653 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 CPT1AP50416 773 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 PEX5P50542 639 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 CDH8P55286 799 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 LACTB2Q53H82 288 aaPredicted RBP5.99□□□□□ -1.45
VPS50-220ENST00000544910 TREML2Q5T2D2 321 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 ACBD5Q5T8D3 534 aaPredicted RBP5.99□□□□□ -1.45
VPS50-220ENST00000544910 FAM183BPQ6ZVS7 135 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 DEFB132Q7Z7B7 95 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 ZNF410Q86VK4 478 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 CCNJLQ8IV13 435 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 ICA1LQ8NDH6 482 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 PWWP2AQ96N64 755 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 PALMDQ9NP74 551 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 TMEM51Q9NW97 253 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 NDUFA13Q9P0J0 144 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 MARCOQ9UEW3 520 aaPredicted RBP5.99□□□□□ -1.45
VPS50-220ENST00000544910 BAG5Q9UL15 447 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 ZNF711Q9Y462 761 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 COL4A1P02462 1669 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 A0A0B4J269 797 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 C17orf102A2RUQ5 167 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 TMEM191CA6NGB0 347 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 CFLARO15519 480 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 H2AFYO75367 372 aaKnown RBP5.99□□□□□ -1.45
VPS50-220ENST00000544910 ASS1P00966 412 aaKnown RBP5.99□□□□□ -1.45
VPS50-220ENST00000544910 S100BP04271 92 aaPredicted RBP5.99□□□□□ -1.45
VPS50-220ENST00000544910 UNGP13051 313 aaPredicted RBP5.99□□□□□ -1.45
VPS50-220ENST00000544910 PTPN4P29074 926 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 SSTR1P30872 391 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 ZNF143P52747 638 aaPredicted RBP5.99□□□□□ -1.45
VPS50-220ENST00000544910 ZNF280AP59817 542 aaPredicted RBP5.99□□□□□ -1.45
VPS50-220ENST00000544910 SLC6A3Q01959 620 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 GLRA4Q5JXX5 417 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 RFX8Q6ZV50 586 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 NDUFAF2Q8N183 169 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 TTC8Q8TAM2 541 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 TCP10LQ8TDR4 215 aa5.99□□□□□ -1.45
VPS50-220ENST00000544910 SCG3Q8WXD2 468 aaKnown RBP5.99□□□□□ -1.45
VPS50-220ENST00000544910 ZNF75CPQ92670 426 aaPredicted RBP5.99□□□□□ -1.45
VPS50-220ENST00000544910 UPF3AQ9H1J1 476 aaKnown RBP5.99□□□□□ -1.45
VPS50-220ENST00000544910 C10orf88Q9H8K7 445 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms