RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 PPM1EQ8WY54 764 aa29.16■■■□□ 2.26
CCM2-218ENST00000541586 AFF4Q9UHB7 1163 aaKnown RBP29.16■■■□□ 2.26
CCM2-218ENST00000541586 ATG2AQ2TAZ0 1938 aa29.16■■■□□ 2.26
CCM2-218ENST00000541586 REV3LO60673 3130 aa29.15■■■□□ 2.26
CCM2-218ENST00000541586 ATF2P15336 505 aa29.15■■■□□ 2.26
CCM2-218ENST00000541586 MAN1A1P33908 653 aa29.15■■■□□ 2.26
CCM2-218ENST00000541586 PAFAH1B1P43034 410 aa29.15■■■□□ 2.26
CCM2-218ENST00000541586 PLA2G4AP47712 749 aa29.15■■■□□ 2.26
CCM2-218ENST00000541586 RPL34P49207 117 aaKnown RBP29.15■■■□□ 2.26
CCM2-218ENST00000541586 PEX5P50542 639 aa29.15■■■□□ 2.26
CCM2-218ENST00000541586 SNX16P57768 344 aa29.15■■■□□ 2.26
CCM2-218ENST00000541586 FAM102AQ5T9C2 384 aaPredicted RBP29.15■■■□□ 2.26
CCM2-218ENST00000541586 TPGS2Q68CL5 300 aa29.15■■■□□ 2.26
CCM2-218ENST00000541586 LILRA6Q6PI73 481 aa29.15■■■□□ 2.26
CCM2-218ENST00000541586 EP400NLQ6ZTU2 488 aa29.15■■■□□ 2.26
CCM2-218ENST00000541586 RSRC2Q7L4I2 434 aaKnown RBP29.15■■■□□ 2.26
CCM2-218ENST00000541586 ZNF572Q7Z3I7 529 aaPredicted RBP29.15■■■□□ 2.26
CCM2-218ENST00000541586 GADD45GIP1Q8TAE8 222 aaPredicted RBP29.15■■■□□ 2.26
CCM2-218ENST00000541586 RHOBTB2Q9BYZ6 727 aa29.15■■■□□ 2.26
CCM2-218ENST00000541586 LCMT1Q9UIC8 334 aa29.15■■■□□ 2.26
CCM2-218ENST00000541586 PCDHB5Q9Y5E4 795 aa29.15■■■□□ 2.26
CCM2-218ENST00000541586 PCDHA3Q9Y5H8 950 aa29.15■■■□□ 2.26
CCM2-218ENST00000541586 CCDC66A2RUB6 948 aa29.14■■■□□ 2.26
CCM2-218ENST00000541586 XPO1O14980 1071 aaKnown RBP29.14■■■□□ 2.26
CCM2-218ENST00000541586 CEP104O60308 925 aa29.14■■■□□ 2.26
CCM2-218ENST00000541586 NPR3P17342 541 aa29.14■■■□□ 2.26
CCM2-218ENST00000541586 BDNFP23560 247 aa29.14■■■□□ 2.26
CCM2-218ENST00000541586 SLC8A3P57103 927 aa29.14■■■□□ 2.26
CCM2-218ENST00000541586 DAB2IPQ5VWQ8 1189 aa29.14■■■□□ 2.26
CCM2-218ENST00000541586 C4orf50Q6ZRC1 276 aa29.14■■■□□ 2.26
CCM2-218ENST00000541586 KREMEN2Q8NCW0 462 aa29.14■■■□□ 2.26
CCM2-218ENST00000541586 GOLGA1Q92805 767 aa29.14■■■□□ 2.26
CCM2-218ENST00000541586 CDCA3Q99618 268 aaPredicted RBP29.14■■■□□ 2.26
CCM2-218ENST00000541586 CARD9Q9H257 536 aa29.14■■■□□ 2.26
CCM2-218ENST00000541586 CYLDQ9NQC7 956 aa29.14■■■□□ 2.26
CCM2-218ENST00000541586 SPDYE4A6NLX3 237 aa29.14■■■□□ 2.25
CCM2-218ENST00000541586 PRRG1O14668 218 aa29.14■■■□□ 2.25
CCM2-218ENST00000541586 SEC24AO95486 1093 aa29.14■■■□□ 2.25
CCM2-218ENST00000541586 VNN2O95498 520 aa29.14■■■□□ 2.25
CCM2-218ENST00000541586 CYP2F1P24903 491 aa29.14■■■□□ 2.25
CCM2-218ENST00000541586 ERCC6LQ2NKX8 1250 aa29.14■■■□□ 2.25
CCM2-218ENST00000541586 FAM35AQ86V20 835 aa29.14■■■□□ 2.25
CCM2-218ENST00000541586 PIWIL1Q96J94 861 aaKnown RBP29.14■■■□□ 2.25
CCM2-218ENST00000541586 HSFY1Q96LI6 401 aa29.14■■■□□ 2.25
CCM2-218ENST00000541586 KRT82Q9NSB4 513 aa29.14■■■□□ 2.25
CCM2-218ENST00000541586 BEST1O76090 585 aa29.13■■■□□ 2.25
CCM2-218ENST00000541586 FAM200BP0CF97 657 aa29.13■■■□□ 2.25
CCM2-218ENST00000541586 SMARCB1Q12824 385 aa29.13■■■□□ 2.25
CCM2-218ENST00000541586 MGAT5BQ3V5L5 792 aa29.13■■■□□ 2.25
CCM2-218ENST00000541586 OLFML1Q6UWY5 402 aa29.13■■■□□ 2.25
CCM2-218ENST00000541586 CLEC20AQ6ZU45 233 aa29.13■■■□□ 2.25
CCM2-218ENST00000541586 SCUBE3Q8IX30 993 aa29.13■■■□□ 2.25
CCM2-218ENST00000541586 TTC9BQ8N6N2 239 aa29.13■■■□□ 2.25
CCM2-218ENST00000541586 SLC22A17Q8WUG5 538 aa29.13■■■□□ 2.25
CCM2-218ENST00000541586 UBXN4Q92575 508 aa29.13■■■□□ 2.25
CCM2-218ENST00000541586 RPGRIP1Q96KN7 1286 aa29.13■■■□□ 2.25
CCM2-218ENST00000541586 SEPT5Q99719 369 aaPredicted RBP29.13■■■□□ 2.25
CCM2-218ENST00000541586 CRISPLD1Q9H336 500 aa29.13■■■□□ 2.25
CCM2-218ENST00000541586 MAN1C1Q9NR34 630 aa29.13■■■□□ 2.25
CCM2-218ENST00000541586 LINC01565O15544 149 aa29.12■■■□□ 2.25
CCM2-218ENST00000541586 PAPSS1O43252 624 aaPredicted RBP29.12■■■□□ 2.25
CCM2-218ENST00000541586 SOAT2O75908 522 aa29.12■■■□□ 2.25
CCM2-218ENST00000541586 ACADSBP45954 432 aa29.12■■■□□ 2.25
CCM2-218ENST00000541586 RNASE9P60153 205 aaKnown RBP29.12■■■□□ 2.25
CCM2-218ENST00000541586 TEX35Q5T0J7 233 aa29.12■■■□□ 2.25
CCM2-218ENST00000541586 PIGZQ86VD9 579 aa29.12■■■□□ 2.25
CCM2-218ENST00000541586 RASGEF1CQ8N431 466 aa29.12■■■□□ 2.25
CCM2-218ENST00000541586 EMC1Q8N766 993 aa29.12■■■□□ 2.25
CCM2-218ENST00000541586 SPPL2BQ8TCT7 592 aa29.12■■■□□ 2.25
CCM2-218ENST00000541586 ACTRT1Q8TDG2 376 aa29.12■■■□□ 2.25
CCM2-218ENST00000541586 FNIP1Q8TF40 1166 aa29.12■■■□□ 2.25
CCM2-218ENST00000541586 USTQ9Y2C2 406 aa29.12■■■□□ 2.25
CCM2-218ENST00000541586 PIGHQ14442 188 aaPredicted RBP29.11■■■□□ 2.25
CCM2-218ENST00000541586 ZDHHC17Q8IUH5 632 aa29.11■■■□□ 2.25
CCM2-218ENST00000541586 NIPA2Q8N8Q9 360 aa29.11■■■□□ 2.25
CCM2-218ENST00000541586 F8VP50 259 aa29.11■■■□□ 2.25
CCM2-218ENST00000541586 AP1G2O75843 785 aa29.11■■■□□ 2.25
CCM2-218ENST00000541586 LCP1P13796 627 aa29.11■■■□□ 2.25
CCM2-218ENST00000541586 MAP3K7CLP57077 242 aa29.11■■■□□ 2.25
CCM2-218ENST00000541586 SLC6A3Q01959 620 aa29.11■■■□□ 2.25
CCM2-218ENST00000541586 ZNF211Q13398 564 aaPredicted RBP29.11■■■□□ 2.25
CCM2-218ENST00000541586 NOA1Q8NC60 698 aaKnown RBP29.11■■■□□ 2.25
CCM2-218ENST00000541586 SPATA4Q8NEY3 305 aa29.11■■■□□ 2.25
CCM2-218ENST00000541586 VN1R2Q8NFZ6 395 aa29.11■■■□□ 2.25
CCM2-218ENST00000541586 SLC7A14Q8TBB6 771 aa29.11■■■□□ 2.25
CCM2-218ENST00000541586 C2orf15Q8WU43 125 aaKnown RBP29.11■■■□□ 2.25
CCM2-218ENST00000541586 TMEM59LQ9UK28 342 aa29.11■■■□□ 2.25
CCM2-218ENST00000541586 FBXW11Q9UKB1 542 aa29.11■■■□□ 2.25
CCM2-218ENST00000541586 PSMA2P25787 234 aa29.1■■■□□ 2.25
CCM2-218ENST00000541586 GRIK1P39086 918 aa29.1■■■□□ 2.25
CCM2-218ENST00000541586 ITIH3Q06033 890 aa29.1■■■□□ 2.25
CCM2-218ENST00000541586 SCN4BQ8IWT1 228 aa29.1■■■□□ 2.25
CCM2-218ENST00000541586 SMOQ99835 787 aa29.1■■■□□ 2.25
CCM2-218ENST00000541586 PGRMC1O00264 195 aaKnown RBP29.09■■■□□ 2.25
CCM2-218ENST00000541586 C8AP07357 584 aa29.09■■■□□ 2.25
CCM2-218ENST00000541586 RWDD2BP57060 319 aa29.09■■■□□ 2.25
CCM2-218ENST00000541586 TAS2R40P59535 323 aa29.09■■■□□ 2.25
CCM2-218ENST00000541586 C2orf54Q08AI8 447 aa29.09■■■□□ 2.25
CCM2-218ENST00000541586 SKIV2LQ15477 1246 aaKnown RBP29.09■■■□□ 2.25
CCM2-218ENST00000541586 TAF5Q15542 800 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms