RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 PNPLA4P41247 253 aa16.5■□□□□ 0.23
PUDP-206ENST00000540122 PPP3CCP48454 512 aa16.5■□□□□ 0.23
PUDP-206ENST00000540122 TARDBPQ13148 414 aaKnown RBP eCLIP16.5■□□□□ 0.23
PUDP-206ENST00000540122 TRIM29Q14134 588 aa16.5■□□□□ 0.23
PUDP-206ENST00000540122 SF3A1Q15459 793 aaKnown RBP16.5■□□□□ 0.23
PUDP-206ENST00000540122 ANO4Q32M45 955 aa16.5■□□□□ 0.23
PUDP-206ENST00000540122 GRAMD4Q6IC98 578 aa16.5■□□□□ 0.23
PUDP-206ENST00000540122 SLC39A4Q6P5W5 647 aa16.5■□□□□ 0.23
PUDP-206ENST00000540122 METTL3Q86U44 580 aaKnown RBP16.5■□□□□ 0.23
PUDP-206ENST00000540122 TMEM25Q86YD3 366 aa16.5■□□□□ 0.23
PUDP-206ENST00000540122 TMEM86AQ8N2M4 240 aa16.5■□□□□ 0.23
PUDP-206ENST00000540122 TMEM176AQ96HP8 235 aa16.5■□□□□ 0.23
PUDP-206ENST00000540122 IGSF5Q9NSI5 407 aa16.5■□□□□ 0.23
PUDP-206ENST00000540122 PCDHGA1Q9Y5H4 931 aa16.5■□□□□ 0.23
PUDP-206ENST00000540122 SLCO1B1Q9Y6L6 691 aa16.5■□□□□ 0.23
PUDP-206ENST00000540122 PTPN13Q12923 2485 aa16.5■□□□□ 0.23
PUDP-206ENST00000540122 KCNJ18B7U540 433 aa16.49■□□□□ 0.23
PUDP-206ENST00000540122 PRRT4C9JH25 899 aa16.49■□□□□ 0.23
PUDP-206ENST00000540122 BRINP1O60477 761 aa16.49■□□□□ 0.23
PUDP-206ENST00000540122 HUS1O60921 280 aa16.49■□□□□ 0.23
PUDP-206ENST00000540122 CCT8P50990 548 aa16.49■□□□□ 0.23
PUDP-206ENST00000540122 AFF3P51826 1226 aaKnown RBP16.49■□□□□ 0.23
PUDP-206ENST00000540122 KCNH2Q12809 1159 aa16.49■□□□□ 0.23
PUDP-206ENST00000540122 LY6DQ14210 128 aa16.49■□□□□ 0.23
PUDP-206ENST00000540122 FAM171BQ6P995 826 aa16.49■□□□□ 0.23
PUDP-206ENST00000540122 C4orf32Q8N8J7 132 aa16.49■□□□□ 0.23
PUDP-206ENST00000540122 IGSF22Q8N9C0 903 aa16.49■□□□□ 0.23
PUDP-206ENST00000540122 CEP295NLQ96MC4 621 aa16.49■□□□□ 0.23
PUDP-206ENST00000540122 ITM2CQ9NQX7 267 aa16.49■□□□□ 0.23
PUDP-206ENST00000540122 SPHK2Q9NRA0 654 aa16.49■□□□□ 0.23
PUDP-206ENST00000540122 DNAJC17Q9NVM6 304 aaKnown RBP16.49■□□□□ 0.23
PUDP-206ENST00000540122 PIEZO2Q9H5I5 2752 aa16.49■□□□□ 0.23
PUDP-206ENST00000540122 COL12A1Q99715 3063 aa16.48■□□□□ 0.23
PUDP-206ENST00000540122 WASH3PC4AMC7 463 aa16.48■□□□□ 0.23
PUDP-206ENST00000540122 GFRA2O00451 464 aa16.48■□□□□ 0.23
PUDP-206ENST00000540122 KCNK3O14649 394 aa16.48■□□□□ 0.23
PUDP-206ENST00000540122 TRIM66O15016 1216 aa16.48■□□□□ 0.23
PUDP-206ENST00000540122 PCSK1P29120 753 aa16.48■□□□□ 0.23
PUDP-206ENST00000540122 GRIK1P39086 918 aa16.48■□□□□ 0.23
PUDP-206ENST00000540122 CSRP3P50461 194 aa16.48■□□□□ 0.23
PUDP-206ENST00000540122 FUT11Q495W5 492 aa16.48■□□□□ 0.23
PUDP-206ENST00000540122 PKDCCQ504Y2 493 aa16.48■□□□□ 0.23
PUDP-206ENST00000540122 TTC38Q5R3I4 469 aa16.48■□□□□ 0.23
PUDP-206ENST00000540122 KRT79Q5XKE5 535 aa16.48■□□□□ 0.23
PUDP-206ENST00000540122 VSTM1Q6UX27 236 aa16.48■□□□□ 0.23
PUDP-206ENST00000540122 C4orf50Q6ZRC1 276 aa16.48■□□□□ 0.23
PUDP-206ENST00000540122 ERICH1Q86X53 443 aa16.48■□□□□ 0.23
PUDP-206ENST00000540122 BBS7Q8IWZ6 715 aa16.48■□□□□ 0.23
PUDP-206ENST00000540122 SCFD1Q8WVM8 642 aa16.48■□□□□ 0.23
PUDP-206ENST00000540122 IGSF8Q969P0 613 aa16.48■□□□□ 0.23
PUDP-206ENST00000540122 MYLPFQ96A32 169 aa16.48■□□□□ 0.23
PUDP-206ENST00000540122 ZFRQ96KR1 1074 aaKnown RBP16.48■□□□□ 0.23
PUDP-206ENST00000540122 EHD2Q9NZN4 543 aa16.48■□□□□ 0.23
PUDP-206ENST00000540122 LARSQ9P2J5 1176 aaKnown RBP16.48■□□□□ 0.23
PUDP-206ENST00000540122 MAGEC2Q9UBF1 373 aaPredicted RBP16.48■□□□□ 0.23
PUDP-206ENST00000540122 KNTC1P50748 2209 aa16.47■□□□□ 0.23
PUDP-206ENST00000540122 NPHP3-ACAD11A0A0J9YXS1 232 aa16.47■□□□□ 0.23
PUDP-206ENST00000540122 GABRDO14764 452 aa16.47■□□□□ 0.23
PUDP-206ENST00000540122 ATP2C2O75185 946 aa16.47■□□□□ 0.23
PUDP-206ENST00000540122 RFPL3O75679 317 aa16.47■□□□□ 0.23
PUDP-206ENST00000540122 REC8O95072 547 aa16.47■□□□□ 0.23
PUDP-206ENST00000540122 BDNFP23560 247 aa16.47■□□□□ 0.23
PUDP-206ENST00000540122 POLR2BP30876 1174 aaKnown RBP16.47■□□□□ 0.23
PUDP-206ENST00000540122 TPMTP51580 245 aa16.47■□□□□ 0.23
PUDP-206ENST00000540122 IL9RQ01113 521 aa16.47■□□□□ 0.23
PUDP-206ENST00000540122 INAVAQ3KP66 663 aa16.47■□□□□ 0.23
PUDP-206ENST00000540122 HES3Q5TGS1 186 aa16.47■□□□□ 0.23
PUDP-206ENST00000540122 USP49Q70CQ1 688 aa16.47■□□□□ 0.23
PUDP-206ENST00000540122 ADGRF2Q8IZF7 708 aa16.47■□□□□ 0.23
PUDP-206ENST00000540122 NECAB1Q8N987 351 aa16.47■□□□□ 0.23
PUDP-206ENST00000540122 MKRN2Q9H000 416 aaKnown RBP16.47■□□□□ 0.23
PUDP-206ENST00000540122 ANKRD6Q9Y2G4 727 aa16.47■□□□□ 0.23
PUDP-206ENST00000540122 SH3BP1Q9Y3L3 701 aa16.47■□□□□ 0.23
PUDP-206ENST00000540122 H0Y8X5 98 aa16.46■□□□□ 0.23
PUDP-206ENST00000540122 ENC1O14682 589 aa16.46■□□□□ 0.23
PUDP-206ENST00000540122 NTRK1P04629 796 aa16.46■□□□□ 0.23
PUDP-206ENST00000540122 ANXA13P27216 316 aa16.46■□□□□ 0.23
PUDP-206ENST00000540122 OXTRP30559 389 aa16.46■□□□□ 0.23
PUDP-206ENST00000540122 ACTN2P35609 894 aa16.46■□□□□ 0.23
PUDP-206ENST00000540122 LHX1P48742 406 aa16.46■□□□□ 0.23
PUDP-206ENST00000540122 PSMC1P62191 440 aaKnown RBP16.46■□□□□ 0.23
PUDP-206ENST00000540122 NOP14P78316 857 aaKnown RBP16.46■□□□□ 0.23
PUDP-206ENST00000540122 TAF10Q12962 218 aa16.46■□□□□ 0.23
PUDP-206ENST00000540122 TBC1D25Q3MII6 688 aa16.46■□□□□ 0.23
PUDP-206ENST00000540122 LAYNQ6UX15 382 aa16.46■□□□□ 0.23
PUDP-206ENST00000540122 SNX19Q92543 992 aa16.46■□□□□ 0.23
PUDP-206ENST00000540122 LGMNQ99538 433 aa16.46■□□□□ 0.23
PUDP-206ENST00000540122 MMTAG2Q9BU76 263 aaKnown RBP16.46■□□□□ 0.23
PUDP-206ENST00000540122 RAB34Q9BZG1 259 aa16.46■□□□□ 0.23
PUDP-206ENST00000540122 AGAP1Q9UPQ3 857 aa16.46■□□□□ 0.23
PUDP-206ENST00000540122 CABIN1Q9Y6J0 2220 aa16.45■□□□□ 0.22
PUDP-206ENST00000540122 TISP43B9A030 160 aa16.45■□□□□ 0.22
PUDP-206ENST00000540122 K7ENM7 598 aa16.45■□□□□ 0.22
PUDP-206ENST00000540122 CBX4O00257 560 aa16.45■□□□□ 0.22
PUDP-206ENST00000540122 COCHO43405 550 aa16.45■□□□□ 0.22
PUDP-206ENST00000540122 CACNG3O60359 315 aa16.45■□□□□ 0.22
PUDP-206ENST00000540122 JAK2O60674 1132 aa16.45■□□□□ 0.22
PUDP-206ENST00000540122 IGLV3-19P01714 112 aa16.45■□□□□ 0.22
PUDP-206ENST00000540122 ITGB3P05106 788 aa16.45■□□□□ 0.22
PUDP-206ENST00000540122 CDK4P11802 303 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms