RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 POTEB3A0JP26 581 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 C2orf81A6NN90 581 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 H3BNH8 94 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 TRIM77I1YAP6 450 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 EYA2O00167 538 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 LAD1O00515 517 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 NCAM2O15394 837 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 TLR3O15455 904 aaKnown RBP6.36□□□□□ -1.39
SNHG1-211ENST00000539921 ZW10O43264 779 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 ZBTB43O43298 467 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 DEAF1O75398 565 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-211ENST00000539921 CLPXO76031 633 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 PLEKP08567 350 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-211ENST00000539921 POLR2MP0CAP2 368 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 SYN1P17600 705 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 ATF6P18850 670 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 TGM1P22735 817 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 PEX2P28328 305 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 RPL9P32969 192 aaKnown RBP6.36□□□□□ -1.39
SNHG1-211ENST00000539921 PSMC2P35998 433 aaKnown RBP6.36□□□□□ -1.39
SNHG1-211ENST00000539921 SLC26A3P40879 764 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 PIK3CAP42336 1068 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 AFMP43652 599 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 ALDH1A3P47895 512 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 CASP5P51878 434 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 MAP3K7CLP57077 242 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 GBE1Q04446 702 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 GFPT1Q06210 699 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-211ENST00000539921 LAPTM5Q13571 262 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 GNA13Q14344 377 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 HERC3Q15034 1050 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 SNX17Q15036 470 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 SKIV2LQ15477 1246 aaKnown RBP6.36□□□□□ -1.39
SNHG1-211ENST00000539921 TRIP10Q15642 601 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 PCSK7Q16549 785 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 CYP2A13Q16696 494 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 TXNRD1Q16881 649 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 LETM2Q2VYF4 491 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 FBXO43Q4G163 708 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 TDRD12Q587J7 1177 aaKnown RBP6.36□□□□□ -1.39
SNHG1-211ENST00000539921 ARSHQ5FYA8 562 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 SLC10A5Q5PT55 438 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 MEX3CQ5U5Q3 659 aaKnown RBP6.36□□□□□ -1.39
SNHG1-211ENST00000539921 SHEQ5VZ18 495 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 GTF2IRD2BQ6EKJ0 949 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 CENPPQ6IPU0 288 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 CNNM4Q6P4Q7 775 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 POTEBQ6S5H4 581 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 PADI6Q6TGC4 694 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 RRAGAQ7L523 313 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 NIPA1Q7RTP0 329 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 TAS2R42Q7RTR8 314 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 GTF2IRD2Q86UP8 949 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 FBXO11Q86XK2 927 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 ZNF677Q86XU0 584 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 CHCHD4Q8N4Q1 142 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 ANKRD42Q8N9B4 389 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 SNX31Q8N9S9 440 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 ENKURQ8TC29 256 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 STON2Q8WXE9 905 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 C12orf43Q96C57 262 aaKnown RBP6.36□□□□□ -1.39
SNHG1-211ENST00000539921 OXNAD1Q96HP4 312 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-211ENST00000539921 WNK4Q96J92 1243 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 SPATA17Q96L03 361 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 C1orf74Q96LT6 269 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 ALPK1Q96QP1 1244 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 KCNK16Q96T55 309 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 LRRC2Q9BYS8 371 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 FRMD8Q9BZ67 464 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-211ENST00000539921 GCOM2Q9BZD3 368 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-211ENST00000539921 GLT8D2Q9H1C3 349 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 OR51B5Q9H339 312 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 BOLA2Q9H3K6 86 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 CDC42EP4Q9H3Q1 356 aaKnown RBP6.36□□□□□ -1.39
SNHG1-211ENST00000539921 CCSER2Q9H7U1 834 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 VRTNQ9H8Y1 702 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 SIAEQ9HAT2 523 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 NEK6Q9HC98 313 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 LRRC4BQ9NT99 713 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 SEPT11Q9NVA2 429 aaKnown RBP6.36□□□□□ -1.39
SNHG1-211ENST00000539921 ABI2Q9NYB9 513 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-211ENST00000539921 DAPK2Q9UIK4 370 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 VPS28Q9UK41 221 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 ITGA11Q9UKX5 1188 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 UGT2A1Q9Y4X1 527 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 KIF1AQ12756 1690 aa6.36□□□□□ -1.39
SNHG1-211ENST00000539921 DCCP43146 1447 aa6.35□□□□□ -1.39
SNHG1-211ENST00000539921 SCN4AP35499 1836 aa6.35□□□□□ -1.39
SNHG1-211ENST00000539921 A0A0B4J203 849 aa6.35□□□□□ -1.39
SNHG1-211ENST00000539921 A0A1W2PRG0 241 aa6.35□□□□□ -1.39
SNHG1-211ENST00000539921 GOLGA8JA6NMD2 632 aa6.35□□□□□ -1.39
SNHG1-211ENST00000539921 B2RBV5 119 aa6.35□□□□□ -1.39
SNHG1-211ENST00000539921 FCHO1O14526 889 aa6.35□□□□□ -1.39
SNHG1-211ENST00000539921 DYNC1LI2O43237 492 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-211ENST00000539921 HOXC11O43248 304 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-211ENST00000539921 ASNA1O43681 348 aa6.35□□□□□ -1.39
SNHG1-211ENST00000539921 GAS2O43903 313 aaKnown RBP6.35□□□□□ -1.39
SNHG1-211ENST00000539921 KLRC4O43908 158 aa6.35□□□□□ -1.39
SNHG1-211ENST00000539921 TYROBPO43914 113 aa6.35□□□□□ -1.39
SNHG1-211ENST00000539921 MAN1A2O60476 641 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms