RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 TPRKBQ9Y3C4 175 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 POLR2AP24928 1970 aaKnown RBP5.84□□□□□ -1.47
CSMD1-215ENST00000537824 TFECO14948 347 aaPredicted RBP5.84□□□□□ -1.47
CSMD1-215ENST00000537824 PRPF4O43172 522 aaKnown RBP eCLIP5.84□□□□□ -1.47
CSMD1-215ENST00000537824 AP5Z1O43299 807 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 TFDP1Q14186 410 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 UTP15Q8TED0 518 aaKnown RBP5.84□□□□□ -1.47
CSMD1-215ENST00000537824 CENPTQ96BT3 561 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 INTS13Q9NVM9 706 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 CPDO75976 1380 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 UBA6A0AVT1 1052 aaPredicted RBP5.84□□□□□ -1.47
CSMD1-215ENST00000537824 TYW5A2RUC4 315 aaKnown RBP5.84□□□□□ -1.47
CSMD1-215ENST00000537824 FAM205CA6NFA0 338 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 NADKO95544 446 aaPredicted RBP5.84□□□□□ -1.47
CSMD1-215ENST00000537824 GSTM1P09488 218 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 RPL10AP62906 217 aaKnown RBP5.84□□□□□ -1.47
CSMD1-215ENST00000537824 GSTA3Q16772 222 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 UGP2Q16851 508 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 DHFR2Q86XF0 187 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 SRBD1Q8N5C6 995 aaKnown RBP5.84□□□□□ -1.47
CSMD1-215ENST00000537824 THAP1Q9NVV9 213 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 COMMD8Q9NX08 183 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 CIDEBQ9UHD4 219 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 WDR17Q8IZU2 1322 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 PVALEFA0A1B0GWK0 134 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 M0QYV0 167 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 M0QZ92 97 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 ATP9BO43861 1147 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 PHC1P78364 1004 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 TBC1D10CQ8IV04 446 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 BDH2Q9BUT1 245 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 SEMA4AQ9H3S1 761 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 ALG6Q9Y672 507 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 CAPN6Q9Y6Q1 641 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 ACACAQ13085 2346 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 SMTNL2Q2TAL5 461 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 PRMT9Q6P2P2 845 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 EIF3MQ7L2H7 374 aaKnown RBP5.84□□□□□ -1.47
CSMD1-215ENST00000537824 MCFD2Q8NI22 146 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 IFT43Q96FT9 208 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 MLXQ9UH92 298 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 WDR19Q8NEZ3 1342 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 TLR2O60603 784 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 ENO2P09104 434 aaPredicted RBP5.84□□□□□ -1.47
CSMD1-215ENST00000537824 RARGP13631 454 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 CCNFP41002 786 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 FBXW4P57775 412 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 ATP2C1P98194 919 aaPredicted RBP5.84□□□□□ -1.47
CSMD1-215ENST00000537824 DDR1Q08345 913 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 USF2Q15853 346 aaPredicted RBP5.84□□□□□ -1.47
CSMD1-215ENST00000537824 CCDC24Q8N4L8 307 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 SVOPQ8N4V2 548 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 ZBTB8BQ8NAP8 495 aaPredicted RBP5.84□□□□□ -1.47
CSMD1-215ENST00000537824 FAR1Q8WVX9 515 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 ATG4AQ8WYN0 398 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 PAFAH2Q99487 392 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 NUDT5Q9UKK9 219 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 EME2A4GXA9 379 aaPredicted RBP5.84□□□□□ -1.47
CSMD1-215ENST00000537824 PPP1R3GB7ZBB8 358 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 PGK2P07205 417 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 PSAPP07602 524 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 POLR2EP19388 210 aaKnown RBP5.84□□□□□ -1.47
CSMD1-215ENST00000537824 PEX3P56589 373 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 PFKFB3Q16875 520 aaPredicted RBP5.84□□□□□ -1.47
CSMD1-215ENST00000537824 ZIK1Q3SY52 487 aaPredicted RBP5.84□□□□□ -1.47
CSMD1-215ENST00000537824 ERICH5Q6P6B1 374 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 CYB5R4Q7L1T6 521 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 STX12Q86Y82 276 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 GPD1LQ8N335 351 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 EFCAB3Q8N7B9 438 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 KBTBD8Q8NFY9 601 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 ANKS1AQ92625 1134 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 ARHGEF26Q96DR7 871 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 MMTAG2Q9BU76 263 aaKnown RBP5.84□□□□□ -1.47
CSMD1-215ENST00000537824 NUAK2Q9H093 628 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 SP110Q9HB58 689 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 APOA4P06727 396 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 SURF1Q15526 300 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 SLC15A2Q16348 729 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 ZNF394Q53GI3 561 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 SLC10A5Q5PT55 438 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 ULK2Q8IYT8 1036 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 CD274Q9NZQ7 290 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 CLEC11AQ9Y240 323 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 FLT1P17948 1338 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 MAGP20916 626 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 ME2P23368 584 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 ALDH6A1Q02252 535 aaKnown RBP5.84□□□□□ -1.47
CSMD1-215ENST00000537824 PKN2Q16513 984 aaKnown RBP5.84□□□□□ -1.47
CSMD1-215ENST00000537824 SHROOM1Q2M3G4 852 aaPredicted RBP5.84□□□□□ -1.47
CSMD1-215ENST00000537824 ABRAXAS1Q6UWZ7 409 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 METTL23Q86XA0 190 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 SLC7A3Q8WY07 619 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 DYNLL2Q96FJ2 89 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 NRBP2Q9NSY0 501 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 PAK5Q9P286 719 aa5.84□□□□□ -1.47
CSMD1-215ENST00000537824 TTI2Q6NXR4 508 aa5.84□□□□□ -1.48
CSMD1-215ENST00000537824 DHDDSQ86SQ9 333 aa5.84□□□□□ -1.48
CSMD1-215ENST00000537824 RASSF5Q8WWW0 418 aa5.84□□□□□ -1.48
CSMD1-215ENST00000537824 SYN2Q92777 582 aaPredicted RBP5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms