RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 MAMLD1Q13495 774 aa22.35■■□□□ 1.17
TRIM3-214ENST00000536344 KPNB1Q14974 876 aaKnown RBP22.35■■□□□ 1.17
TRIM3-214ENST00000536344 ARHGEF18Q6ZSZ5 1173 aa22.35■■□□□ 1.17
TRIM3-214ENST00000536344 ZNF410Q86VK4 478 aa22.35■■□□□ 1.17
TRIM3-214ENST00000536344 ZNF677Q86XU0 584 aa22.35■■□□□ 1.17
TRIM3-214ENST00000536344 UVRAGQ9P2Y5 699 aa22.35■■□□□ 1.17
TRIM3-214ENST00000536344 CYTH4Q9UIA0 394 aa22.35■■□□□ 1.17
TRIM3-214ENST00000536344 USH1CQ9Y6N9 552 aa22.35■■□□□ 1.17
TRIM3-214ENST00000536344 CALCOCO2Q13137 446 aa22.34■■□□□ 1.17
TRIM3-214ENST00000536344 SNX17Q15036 470 aa22.34■■□□□ 1.17
TRIM3-214ENST00000536344 C12orf29Q8N999 325 aa22.34■■□□□ 1.17
TRIM3-214ENST00000536344 WNT8BQ93098 351 aa22.34■■□□□ 1.17
TRIM3-214ENST00000536344 CADM1Q9BY67 442 aaKnown RBP22.34■■□□□ 1.17
TRIM3-214ENST00000536344 ELOVL4Q9GZR5 314 aa22.34■■□□□ 1.17
TRIM3-214ENST00000536344 PREBQ9HCU5 417 aa22.34■■□□□ 1.17
TRIM3-214ENST00000536344 FGFR1P11362 822 aa22.34■■□□□ 1.17
TRIM3-214ENST00000536344 HADHBP55084 474 aaKnown RBP22.34■■□□□ 1.17
TRIM3-214ENST00000536344 SREBF2Q12772 1141 aa22.34■■□□□ 1.17
TRIM3-214ENST00000536344 ATP13A4Q4VNC1 1196 aa22.34■■□□□ 1.17
TRIM3-214ENST00000536344 TRMT10CQ7L0Y3 403 aaKnown RBP22.34■■□□□ 1.17
TRIM3-214ENST00000536344 GATA6Q92908 595 aa22.34■■□□□ 1.17
TRIM3-214ENST00000536344 CD101Q93033 1021 aa22.34■■□□□ 1.17
TRIM3-214ENST00000536344 TRAPPC9Q96Q05 1148 aa22.34■■□□□ 1.17
TRIM3-214ENST00000536344 STOML1Q9UBI4 398 aa22.34■■□□□ 1.17
TRIM3-214ENST00000536344 C17orf102A2RUQ5 167 aa22.33■■□□□ 1.17
TRIM3-214ENST00000536344 MBLAC1A4D2B0 266 aaPredicted RBP22.33■■□□□ 1.17
TRIM3-214ENST00000536344 TLR3O15455 904 aaKnown RBP22.33■■□□□ 1.17
TRIM3-214ENST00000536344 CA12O43570 354 aa22.33■■□□□ 1.17
TRIM3-214ENST00000536344 UBA3Q8TBC4 463 aa22.33■■□□□ 1.17
TRIM3-214ENST00000536344 SOCS4Q8WXH5 440 aa22.33■■□□□ 1.17
TRIM3-214ENST00000536344 HEMGNQ9BXL5 484 aa22.33■■□□□ 1.17
TRIM3-214ENST00000536344 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.33■■□□□ 1.17
TRIM3-214ENST00000536344 RECQL4O94761 1208 aa22.33■■□□□ 1.16
TRIM3-214ENST00000536344 TTC4O95801 387 aa22.33■■□□□ 1.16
TRIM3-214ENST00000536344 AKR1A1P14550 325 aa22.33■■□□□ 1.16
TRIM3-214ENST00000536344 PTP4A2Q12974 167 aa22.33■■□□□ 1.16
TRIM3-214ENST00000536344 CNPY1Q3B7I2 92 aa22.33■■□□□ 1.16
TRIM3-214ENST00000536344 RASIP1Q5U651 963 aa22.33■■□□□ 1.16
TRIM3-214ENST00000536344 WDR60Q8WVS4 1066 aa22.33■■□□□ 1.16
TRIM3-214ENST00000536344 C9orf72Q96LT7 481 aa22.33■■□□□ 1.16
TRIM3-214ENST00000536344 MCEEQ96PE7 176 aa22.33■■□□□ 1.16
TRIM3-214ENST00000536344 HERPUD2Q9BSE4 406 aa22.33■■□□□ 1.16
TRIM3-214ENST00000536344 WASF2Q9Y6W5 498 aa22.33■■□□□ 1.16
TRIM3-214ENST00000536344 SMIM35A0A1B0GVV1 85 aa22.32■■□□□ 1.16
TRIM3-214ENST00000536344 RASA4BC9J798 803 aa22.32■■□□□ 1.16
TRIM3-214ENST00000536344 RASA4O43374 803 aa22.32■■□□□ 1.16
TRIM3-214ENST00000536344 TAS2R40P59535 323 aa22.32■■□□□ 1.16
TRIM3-214ENST00000536344 ADAM17P78536 824 aa22.32■■□□□ 1.16
TRIM3-214ENST00000536344 TMED2Q15363 201 aa22.32■■□□□ 1.16
TRIM3-214ENST00000536344 SIX1Q15475 284 aaPredicted RBP22.32■■□□□ 1.16
TRIM3-214ENST00000536344 ZFYVE27Q5T4F4 411 aa22.32■■□□□ 1.16
TRIM3-214ENST00000536344 SLC27A1Q6PCB7 646 aa22.32■■□□□ 1.16
TRIM3-214ENST00000536344 MTDHQ86UE4 582 aaKnown RBP22.32■■□□□ 1.16
TRIM3-214ENST00000536344 ATG4AQ8WYN0 398 aa22.32■■□□□ 1.16
TRIM3-214ENST00000536344 HEXIM2Q96MH2 286 aaKnown RBP22.32■■□□□ 1.16
TRIM3-214ENST00000536344 GBP5Q96PP8 586 aa22.32■■□□□ 1.16
TRIM3-214ENST00000536344 SNX9Q9Y5X1 595 aa22.32■■□□□ 1.16
TRIM3-214ENST00000536344 DCAF8L1A6NGE4 600 aa22.32■■□□□ 1.16
TRIM3-214ENST00000536344 MEIS3P2A8K0S8 358 aa22.32■■□□□ 1.16
TRIM3-214ENST00000536344 ATP5HO75947 161 aa22.32■■□□□ 1.16
TRIM3-214ENST00000536344 MTA2O94776 668 aa22.32■■□□□ 1.16
TRIM3-214ENST00000536344 FAM163BP0C2L3 166 aa22.32■■□□□ 1.16
TRIM3-214ENST00000536344 NFX1Q12986 1120 aaKnown RBP22.32■■□□□ 1.16
TRIM3-214ENST00000536344 PLEKHG4Q58EX7 1191 aa22.32■■□□□ 1.16
TRIM3-214ENST00000536344 LRRC74BQ6ZQY2 392 aa22.32■■□□□ 1.16
TRIM3-214ENST00000536344 APLFQ8IW19 511 aaPredicted RBP22.32■■□□□ 1.16
TRIM3-214ENST00000536344 SLC4A11Q8NBS3 891 aa22.32■■□□□ 1.16
TRIM3-214ENST00000536344 ASB7Q9H672 318 aa22.32■■□□□ 1.16
TRIM3-214ENST00000536344 ASIC3Q9UHC3 531 aa22.32■■□□□ 1.16
TRIM3-214ENST00000536344 HAS3O00219 553 aa22.31■■□□□ 1.16
TRIM3-214ENST00000536344 SKIP12755 728 aa22.31■■□□□ 1.16
TRIM3-214ENST00000536344 IGFBP6P24592 240 aaPredicted RBP22.31■■□□□ 1.16
TRIM3-214ENST00000536344 KRT17Q04695 432 aa22.31■■□□□ 1.16
TRIM3-214ENST00000536344 LIN9Q5TKA1 542 aa22.31■■□□□ 1.16
TRIM3-214ENST00000536344 CCND3P30281 292 aaPredicted RBP22.31■■□□□ 1.16
TRIM3-214ENST00000536344 NOTUMQ6P988 496 aa22.31■■□□□ 1.16
TRIM3-214ENST00000536344 C10orf82Q8WW14 230 aa22.31■■□□□ 1.16
TRIM3-214ENST00000536344 PRR11Q96HE9 360 aaPredicted RBP22.31■■□□□ 1.16
TRIM3-214ENST00000536344 UBN1Q9NPG3 1134 aa22.31■■□□□ 1.16
TRIM3-214ENST00000536344 NINJ2Q9NZG7 142 aa22.31■■□□□ 1.16
TRIM3-214ENST00000536344 STARD13Q9Y3M8 1113 aa22.31■■□□□ 1.16
TRIM3-214ENST00000536344 PI4K2BG5E9Z4 385 aa22.3■■□□□ 1.16
TRIM3-214ENST00000536344 MMP8P22894 467 aa22.3■■□□□ 1.16
TRIM3-214ENST00000536344 PTPN4P29074 926 aa22.3■■□□□ 1.16
TRIM3-214ENST00000536344 GRM5P41594 1212 aa22.3■■□□□ 1.16
TRIM3-214ENST00000536344 NDST1P52848 882 aa22.3■■□□□ 1.16
TRIM3-214ENST00000536344 IL9RQ01113 521 aa22.3■■□□□ 1.16
TRIM3-214ENST00000536344 MYBPC3Q14896 1274 aa22.3■■□□□ 1.16
TRIM3-214ENST00000536344 PTPRN2Q92932 1015 aa22.3■■□□□ 1.16
TRIM3-214ENST00000536344 GRAMD1AQ96CP6 724 aa22.3■■□□□ 1.16
TRIM3-214ENST00000536344 MRRFQ96E11 262 aaKnown RBP22.3■■□□□ 1.16
TRIM3-214ENST00000536344 KRT82Q9NSB4 513 aa22.3■■□□□ 1.16
TRIM3-214ENST00000536344 ASMTLO95671 621 aa22.3■■□□□ 1.16
TRIM3-214ENST00000536344 ATP5DP30049 168 aa22.3■■□□□ 1.16
TRIM3-214ENST00000536344 CCNFP41002 786 aa22.3■■□□□ 1.16
TRIM3-214ENST00000536344 INHBCP55103 352 aa22.3■■□□□ 1.16
TRIM3-214ENST00000536344 PTPN20Q4JDL3 420 aa22.3■■□□□ 1.16
TRIM3-214ENST00000536344 PABPC1LQ4VXU2 614 aaKnown RBP22.3■■□□□ 1.16
TRIM3-214ENST00000536344 SEL1L2Q5TEA6 688 aa22.3■■□□□ 1.16
TRIM3-214ENST00000536344 WNT8AQ9H1J5 351 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms