RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 DDX53Q86TM3 631 aaKnown RBP8.28□□□□□ -1.08
CASP4-212ENST00000533730 CDR2LQ86X02 465 aaPredicted RBP8.28□□□□□ -1.08
CASP4-212ENST00000533730 ELOA2Q8IYF1 753 aaPredicted RBP8.28□□□□□ -1.08
CASP4-212ENST00000533730 SYCP3Q8IZU3 236 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 SVIPQ8NHG7 77 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 ACAP3Q96P50 834 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 FAM193BQ96PV7 902 aaPredicted RBP8.28□□□□□ -1.08
CASP4-212ENST00000533730 ARPC5LQ9BPX5 153 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 TMEM175Q9BSA9 504 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 C17orf80Q9BSJ5 609 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 APOL6Q9BWW8 343 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 STRA6Q9BX79 667 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 GOLPH3LQ9H4A5 285 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 PRDM12Q9H4Q4 367 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 PIDD1Q9HB75 910 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 SSU72Q9NP77 194 aaKnown RBP8.28□□□□□ -1.08
CASP4-212ENST00000533730 TBC1D13Q9NVG8 400 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 OBP2AQ9NY56 170 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 ANKFY1Q9P2R3 1169 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 RAXQ9Y2V3 346 aa8.28□□□□□ -1.08
CASP4-212ENST00000533730 FNDC1Q4ZHG4 1894 aaPredicted RBP8.28□□□□□ -1.08
CASP4-212ENST00000533730 GOLGA6L22H0YM25 854 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 CBX4O00257 560 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 AQP7O14520 342 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 ABLIM1O14639 778 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 OGTO15294 1046 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 RECQL4O94761 1208 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 LRIG2O94898 1065 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 FKBP9O95302 570 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 SMC2O95347 1197 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 RPN1P04843 607 aaKnown RBP8.27□□□□□ -1.09
CASP4-212ENST00000533730 CLTAP09496 248 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 LINC00271P0C7V0 271 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 MYBL2P10244 700 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 PAX3P23760 479 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 AKAP5P24588 427 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 MLH1P40692 756 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 SNRPFP62306 86 aaKnown RBP8.27□□□□□ -1.09
CASP4-212ENST00000533730 DSG1Q02413 1049 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 KRT17Q04695 432 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 GPM6BQ13491 265 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 CUL4BQ13620 913 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 KCNB1Q14721 858 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 ZC2HC1CQ53FD0 456 aaPredicted RBP8.27□□□□□ -1.09
CASP4-212ENST00000533730 CXorf57Q6NSI4 855 aaKnown RBP8.27□□□□□ -1.09
CASP4-212ENST00000533730 FKBP9P1Q75LS8 142 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 KIF18BQ86Y91 864 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 THNSL1Q8IYQ7 743 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 COLGALT1Q8NBJ5 622 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 ENGASEQ8NFI3 743 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 GUCD1Q96NT3 240 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 TSPAN18Q96SJ8 248 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 GAD1Q99259 594 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 CDX2Q99626 313 aaPredicted RBP8.27□□□□□ -1.09
CASP4-212ENST00000533730 MSTO1Q9BUK6 570 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 BLZF1Q9H2G9 400 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 ACSS3Q9H6R3 686 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 CWH43Q9H720 699 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 PLEKHA5Q9HAU0 1116 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 RMND1Q9NWS8 449 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 SPG21Q9NZD8 308 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 TBC1D7Q9P0N9 293 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 CGNQ9P2M7 1197 aaKnown RBP8.27□□□□□ -1.09
CASP4-212ENST00000533730 PUF60Q9UHX1 559 aaKnown RBP8.27□□□□□ -1.09
CASP4-212ENST00000533730 MTUS1Q9ULD2 1270 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 LZTS1Q9Y250 596 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 STXBP5LQ9Y2K9 1186 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 GDAQ9Y2T3 454 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 HES2Q9Y543 173 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 STYXL1Q9Y6J8 313 aa8.27□□□□□ -1.09
CASP4-212ENST00000533730 A0A0B4J269 797 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.26□□□□□ -1.09
CASP4-212ENST00000533730 RBAK-RBAKDNI3L0D1 243 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 KLRC4O43908 158 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 ADAM23O75077 832 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 ZC3H11AO75152 810 aaKnown RBP eCLIP8.26□□□□□ -1.09
CASP4-212ENST00000533730 RHOBTB3O94955 611 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 MT-CO1P00395 513 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 CPP00450 1065 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 POMCP01189 267 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 ALDH2P05091 517 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 THP07101 528 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 MYBP10242 640 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 FOSL2P15408 326 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 MAP4P27816 1152 aaKnown RBP8.26□□□□□ -1.09
CASP4-212ENST00000533730 SCNN1GP51170 649 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 BCAR1P56945 870 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 DSC1Q08554 894 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 SNW1Q13573 536 aaKnown RBP8.26□□□□□ -1.09
CASP4-212ENST00000533730 LRRC55Q6ZSA7 311 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 EPM2AIP1Q7L775 607 aaPredicted RBP8.26□□□□□ -1.09
CASP4-212ENST00000533730 MTDHQ86UE4 582 aaKnown RBP8.26□□□□□ -1.09
CASP4-212ENST00000533730 CD302Q8IX05 232 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 GRAMD1CQ8IYS0 662 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 MFSD2AQ8NA29 543 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 GOLGA5Q8TBA6 731 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 FBLIM1Q8WUP2 373 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 MYLIPQ8WY64 445 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 POMGNT1Q8WZA1 660 aa8.26□□□□□ -1.09
CASP4-212ENST00000533730 MRPL38Q96DV4 380 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms