RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 SNRNP25Q9BV90 132 aaKnown RBP15.99■□□□□ 0.15
CACNA1E-208ENST00000533229 C12orf65Q9H3J6 166 aaKnown RBP15.99■□□□□ 0.15
CACNA1E-208ENST00000533229 FETUBQ9UGM5 382 aa15.99■□□□□ 0.15
CACNA1E-208ENST00000533229 HEY1Q9Y5J3 304 aa15.99■□□□□ 0.15
CACNA1E-208ENST00000533229 LMO2P25791 158 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 RBL1P28749 1068 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 SDC4P31431 198 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 YARSP54577 528 aaKnown RBP15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 NCALDP61601 193 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 TFDP2Q14188 446 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 SPARCL1Q14515 664 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 STILQ15468 1287 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 BOLA3Q53S33 107 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 FAM47CQ5HY64 1035 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 C7orf31Q8N865 590 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 CCDC63Q8NA47 563 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 OR6B3Q8NGW1 331 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 KLF6Q99612 283 aaPredicted RBP15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 ABHD16BQ9H3Z7 469 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 PPCSQ9HAB8 311 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 GOLGA8RI6L899 631 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 KCNN4O15554 427 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 MNAT1P51948 309 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 ELF3P78545 371 aaPredicted RBP15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 BNIP1Q12981 228 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 PDK2Q15119 407 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 PDK4Q16654 411 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 ZNF618Q5T7W0 954 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 C9orf57Q5W0N0 161 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 TBC1D1Q86TI0 1168 aaPredicted RBP15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 PARP9Q8IXQ6 854 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 TMEM40Q8WWA1 233 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 APOL6Q9BWW8 343 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 CD248Q9HCU0 757 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 PHTF1Q9UMS5 762 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 DERAQ9Y315 318 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 TEX264Q9Y6I9 313 aa15.98■□□□□ 0.15
CACNA1E-208ENST00000533229 TCRBV9S1A1TA0A576 114 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 KBTBD13C9JR72 458 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 SPTLC1O15269 473 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 DYNC1LI2O43237 492 aaPredicted RBP15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 MGRN1O60291 552 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 RECQL4O94761 1208 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 PDGFRBP09619 1106 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 CCDC130P13994 396 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 FAXCQ5TGI0 409 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 SLC9A4Q6AI14 798 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 LVRNQ6Q4G3 990 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 MAP7D3Q8IWC1 876 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 KBTBD7Q8WVZ9 684 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 FAF2Q96CS3 445 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 PTPN18Q99952 460 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 GCOM2Q9BZD3 368 aaPredicted RBP15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 RNF39Q9H2S5 420 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 RXFP1Q9HBX9 757 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 RAB6BQ9NRW1 208 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 KLHL14Q9P2G3 628 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 SLC45A1Q9Y2W3 748 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 A8MXQ7 604 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 SMAPO00193 183 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 SMIM10L2AP0DMW4 78 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 SMIM10L2BP0DMW5 78 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 MSH2P43246 934 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 GTF2A2P52657 109 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 BCAR1P56945 870 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 KCNJ2P63252 427 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 KLHL38Q2WGJ6 581 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 PPP6R3Q5H9R7 873 aaPredicted RBP15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 RNF43Q68DV7 783 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 RGS9BPQ6ZS82 235 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 ZNF276Q8N554 614 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 LRRC52Q8N7C0 313 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 TEKT4Q8WW24 435 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 LENG1Q96BZ8 264 aaPredicted RBP15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 GRAMD1AQ96CP6 724 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 C11orf84Q9BUA3 381 aaPredicted RBP15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 ECT2Q9H8V3 914 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 KLK14Q9P0G3 267 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 CNTN3Q9P232 1028 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 HESX1Q9UBX0 185 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 STARD13Q9Y3M8 1113 aa15.97■□□□□ 0.15
CACNA1E-208ENST00000533229 SCN1AP35498 2009 aa15.96■□□□□ 0.15
CACNA1E-208ENST00000533229 APOL1O14791 398 aa15.96■□□□□ 0.15
CACNA1E-208ENST00000533229 DARSP14868 501 aaKnown RBP15.96■□□□□ 0.15
CACNA1E-208ENST00000533229 ADRA1DP25100 572 aa15.96■□□□□ 0.15
CACNA1E-208ENST00000533229 ADORA2BP29275 332 aa15.96■□□□□ 0.15
CACNA1E-208ENST00000533229 RDXP35241 583 aaKnown RBP15.96■□□□□ 0.15
CACNA1E-208ENST00000533229 KBTBD12Q3ZCT8 623 aa15.96■□□□□ 0.15
CACNA1E-208ENST00000533229 IQSEC1Q6DN90 963 aa15.96■□□□□ 0.15
CACNA1E-208ENST00000533229 NOTUMQ6P988 496 aa15.96■□□□□ 0.15
CACNA1E-208ENST00000533229 SESTD1Q86VW0 696 aa15.96■□□□□ 0.15
CACNA1E-208ENST00000533229 CCDC33Q8N5R6 958 aa15.96■□□□□ 0.15
CACNA1E-208ENST00000533229 BEST2Q8NFU1 509 aa15.96■□□□□ 0.15
CACNA1E-208ENST00000533229 RTP4Q96DX8 246 aa15.96■□□□□ 0.15
CACNA1E-208ENST00000533229 GOLGA2P5Q9HBQ8 144 aa15.96■□□□□ 0.15
CACNA1E-208ENST00000533229 PLXNA1Q9UIW2 1896 aa15.96■□□□□ 0.14
CACNA1E-208ENST00000533229 RRN3P2A6NIE6 340 aa15.95■□□□□ 0.14
CACNA1E-208ENST00000533229 MDM4O15151 490 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms