RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 TERB1Q8NA31 727 aa9.55□□□□□ -0.88
USF1-210ENST00000531842 IPO4Q8TEX9 1081 aaKnown RBP9.55□□□□□ -0.88
USF1-210ENST00000531842 SETD7Q8WTS6 366 aaKnown RBP9.55□□□□□ -0.88
USF1-210ENST00000531842 HPS3Q969F9 1004 aa9.55□□□□□ -0.88
USF1-210ENST00000531842 FUBP3Q96I24 572 aaKnown RBP eCLIP9.55□□□□□ -0.88
USF1-210ENST00000531842 EPSTI1Q96J88 318 aa9.55□□□□□ -0.88
USF1-210ENST00000531842 DCBLD2Q96PD2 775 aa9.55□□□□□ -0.88
USF1-210ENST00000531842 KCNK16Q96T55 309 aa9.55□□□□□ -0.88
USF1-210ENST00000531842 STRA6Q9BX79 667 aa9.55□□□□□ -0.88
USF1-210ENST00000531842 BACH2Q9BYV9 841 aa9.55□□□□□ -0.88
USF1-210ENST00000531842 MIR1-1HGQ9H1L0 117 aa9.55□□□□□ -0.88
USF1-210ENST00000531842 GDAP2Q9NXN4 497 aa9.55□□□□□ -0.88
USF1-210ENST00000531842 PCOLCE2Q9UKZ9 415 aa9.55□□□□□ -0.88
USF1-210ENST00000531842 FNDC3AQ9Y2H6 1198 aaKnown RBP9.55□□□□□ -0.88
USF1-210ENST00000531842 ATMQ13315 3056 aa9.55□□□□□ -0.88
USF1-210ENST00000531842 CKAP5Q14008 2032 aa9.55□□□□□ -0.88
USF1-210ENST00000531842 TRABD2BA6NFA1 517 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 KCNJ18B7U540 433 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 PRPF6O94906 941 aaKnown RBP9.54□□□□□ -0.88
USF1-210ENST00000531842 TBX18O95935 607 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 TMEM191BP0C7N4 346 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 ANXA13P27216 316 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 ITPKBP27987 946 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 PCSK1P29120 753 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 UBA7P41226 1012 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 LHX1P48742 406 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 RBP5P82980 135 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 ORC1Q13415 861 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 RABEP1Q15276 862 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 RILPL1Q5EBL4 403 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 C4orf50Q6ZRC1 276 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 TPGS1Q6ZTW0 290 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 LIMS2Q7Z4I7 341 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 CBWD2Q8IUF1 395 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 CHPFQ8IZ52 775 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 LRRC52Q8N7C0 313 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 RASSF8Q8NHQ8 419 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 CEP76Q8TAP6 659 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 PIP4K2CQ8TBX8 421 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 LARP4BQ92615 738 aaKnown RBP9.54□□□□□ -0.88
USF1-210ENST00000531842 CALML4Q96GE6 196 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 HPDLQ96IR7 371 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 TMX3Q96JJ7 454 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 MRGPRX1Q96LB2 322 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 MMS19Q96T76 1030 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 B3GNT5Q9BYG0 378 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 MRPL44Q9H9J2 332 aaKnown RBP9.54□□□□□ -0.88
USF1-210ENST00000531842 SPHK2Q9NRA0 654 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 DNAJC17Q9NVM6 304 aaKnown RBP9.54□□□□□ -0.88
USF1-210ENST00000531842 PLK2Q9NYY3 685 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 DEC1Q9P2X7 70 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 ITGA11Q9UKX5 1188 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 CDH9Q9ULB4 789 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 GTF3C3Q9Y5Q9 886 aa9.54□□□□□ -0.88
USF1-210ENST00000531842 HECTD1Q9ULT8 2610 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 DOCK9Q9BZ29 2069 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 A0A1W2PQD8 194 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 NEDD8-MDP1E9PL57 170 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 PYCARD-AS1I3L0S3 204 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 MDM4O15151 490 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 NDUFS2O75306 463 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 GCNT3O95395 438 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 CST3P01034 146 aaPredicted RBP9.53□□□□□ -0.88
USF1-210ENST00000531842 SYPP08247 313 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 WARSP23381 471 aaKnown RBP9.53□□□□□ -0.88
USF1-210ENST00000531842 NTSR1P30989 418 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 RDXP35241 583 aaKnown RBP9.53□□□□□ -0.88
USF1-210ENST00000531842 HOXD12P35452 270 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 EIF2DP41214 584 aaKnown RBP9.53□□□□□ -0.88
USF1-210ENST00000531842 GAD2Q05329 585 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 SPDYCQ5MJ68 293 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 L1TD1Q5T7N2 865 aaKnown RBP9.53□□□□□ -0.88
USF1-210ENST00000531842 VSTM1Q6UX27 236 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 SLC36A4Q6YBV0 504 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 CCDC26Q8TAB7 109 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 MYCBPAPQ8TBZ2 947 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 FBXO32Q969P5 355 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 DNAJC19Q96DA6 116 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 TOE1Q96GM8 510 aaKnown RBP9.53□□□□□ -0.88
USF1-210ENST00000531842 ZNF419Q96HQ0 510 aaPredicted RBP9.53□□□□□ -0.88
USF1-210ENST00000531842 GPR174Q9BXC1 333 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 ST6GALNAC4Q9H4F1 302 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 GAREM1Q9H706 876 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 INTS13Q9NVM9 706 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 GMIPQ9P107 970 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 NUDT5Q9UKK9 219 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.53□□□□□ -0.88
USF1-210ENST00000531842 MYO18BQ8IUG5 2567 aa9.53□□□□□ -0.88
USF1-210ENST00000531842 A0A1B0GVT2 93 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 EIF4E1BA6NMX2 242 aaKnown RBP9.52□□□□□ -0.89
USF1-210ENST00000531842 MEI4A8MW99 385 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 CBX4O00257 560 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 SLC9A3R1O14745 358 aaPredicted RBP9.52□□□□□ -0.89
USF1-210ENST00000531842 HOXC11O43248 304 aaPredicted RBP9.52□□□□□ -0.89
USF1-210ENST00000531842 GREM1O60565 184 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 CILPO75339 1184 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 BEST1O76090 585 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 PTPN1P18031 435 aaKnown RBP9.52□□□□□ -0.89
USF1-210ENST00000531842 CDH8P55286 799 aa9.52□□□□□ -0.89
USF1-210ENST00000531842 NOP14P78316 857 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms