RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 HVCN1Q96D96 273 aa11.36□□□□□ -0.59
TM9SF1-210ENST00000530563 OTUB2Q96DC9 234 aa11.36□□□□□ -0.59
TM9SF1-210ENST00000530563 MRGPRX1Q96LB2 322 aa11.36□□□□□ -0.59
TM9SF1-210ENST00000530563 MTMR12Q9C0I1 747 aa11.36□□□□□ -0.59
TM9SF1-210ENST00000530563 SPHK2Q9NRA0 654 aa11.36□□□□□ -0.59
TM9SF1-210ENST00000530563 RBAKQ9NYW8 714 aaPredicted RBP11.36□□□□□ -0.59
TM9SF1-210ENST00000530563 DEC1Q9P2X7 70 aa11.36□□□□□ -0.59
TM9SF1-210ENST00000530563 APOBEC2Q9Y235 224 aaKnown RBP11.36□□□□□ -0.59
TM9SF1-210ENST00000530563 HECTD1Q9ULT8 2610 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 GOLGA8IPA6NC78 632 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 TRABD2BA6NFA1 517 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 GOLGA8JA6NMD2 632 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 TRIM66O15016 1216 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 TBCAO75347 108 aaKnown RBP11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 PRB1P04280 392 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 KRT19P08727 400 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 ATXN1LP0C7T5 689 aaKnown RBP11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 ZNF883P0CG24 379 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 MBL2P11226 248 aaPredicted RBP11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 DDIT3P35638 169 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 UBA7P41226 1012 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 CASP5P51878 434 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 CYP27A1Q02318 531 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 CYP4F3Q08477 520 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 MAPRE1Q15691 268 aaKnown RBP11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 DDX42Q86XP3 938 aaKnown RBP eCLIP11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 SCUBE3Q8IX30 993 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 DNAJC19Q96DA6 116 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 ERLEC1Q96DZ1 483 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 P2RY11Q96G91 374 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 CALML4Q96GE6 196 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 HPDLQ96IR7 371 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 ZSCAN31Q96LW9 406 aaPredicted RBP11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 CBWD1Q9BRT8 395 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 TRIM9Q9C026 710 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 ZDHHC5Q9C0B5 715 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 INTS13Q9NVM9 706 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 IL37Q9NZH6 218 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 EHD2Q9NZN4 543 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 SUSD2Q9UGT4 822 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 NFE2L3Q9Y4A8 694 aa11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 GOLGA4Q13439 2230 aaKnown RBP11.35□□□□□ -0.59
TM9SF1-210ENST00000530563 WASH3PC4AMC7 463 aa11.34□□□□□ -0.59
TM9SF1-210ENST00000530563 ABL1P00519 1130 aa11.34□□□□□ -0.59
TM9SF1-210ENST00000530563 KRT18P05783 430 aaKnown RBP11.34□□□□□ -0.59
TM9SF1-210ENST00000530563 CISD3P0C7P0 127 aa11.34□□□□□ -0.59
TM9SF1-210ENST00000530563 ZDHHC11BP0C7U3 371 aa11.34□□□□□ -0.59
TM9SF1-210ENST00000530563 GARTP22102 1010 aa11.34□□□□□ -0.59
TM9SF1-210ENST00000530563 PGFP49763 221 aa11.34□□□□□ -0.59
TM9SF1-210ENST00000530563 MDH1BQ5I0G3 518 aa11.34□□□□□ -0.59
TM9SF1-210ENST00000530563 L1TD1Q5T7N2 865 aaKnown RBP11.34□□□□□ -0.59
TM9SF1-210ENST00000530563 TDRD10Q5VZ19 366 aaKnown RBP11.34□□□□□ -0.59
TM9SF1-210ENST00000530563 METTL3Q86U44 580 aaKnown RBP11.34□□□□□ -0.59
TM9SF1-210ENST00000530563 RGL4Q8IZJ4 473 aa11.34□□□□□ -0.59
TM9SF1-210ENST00000530563 LARP4BQ92615 738 aaKnown RBP11.34□□□□□ -0.59
TM9SF1-210ENST00000530563 FOXJ1Q92949 421 aa11.34□□□□□ -0.59
TM9SF1-210ENST00000530563 ACCSQ96QU6 501 aa11.34□□□□□ -0.59
TM9SF1-210ENST00000530563 MRPL45Q9BRJ2 306 aaKnown RBP11.34□□□□□ -0.59
TM9SF1-210ENST00000530563 B3GNT5Q9BYG0 378 aa11.34□□□□□ -0.59
TM9SF1-210ENST00000530563 FGFBP2Q9BYJ0 223 aa11.34□□□□□ -0.59
TM9SF1-210ENST00000530563 ZNF518BQ9C0D4 1074 aa11.34□□□□□ -0.59
TM9SF1-210ENST00000530563 CCSER2Q9H7U1 834 aa11.34□□□□□ -0.59
TM9SF1-210ENST00000530563 WSB2Q9NYS7 404 aaPredicted RBP11.34□□□□□ -0.59
TM9SF1-210ENST00000530563 CHORDC1Q9UHD1 332 aaPredicted RBP11.34□□□□□ -0.59
TM9SF1-210ENST00000530563 FNDC3AQ9Y2H6 1198 aaKnown RBP11.34□□□□□ -0.59
TM9SF1-210ENST00000530563 RAD54BQ9Y620 910 aa11.34□□□□□ -0.59
TM9SF1-210ENST00000530563 MYO18BQ8IUG5 2567 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 COL12A1Q99715 3063 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 A0A1B0GTW7 788 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 FAM92AA1XBS5 289 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 CYSRT1A8MQ03 144 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 KCNJ18B7U540 433 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 CACNG3O60359 315 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 TACC1O75410 805 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 LDHAP00338 332 aaKnown RBP11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 GNSP15586 552 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 PTPN1P18031 435 aaKnown RBP11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 ANXA13P27216 316 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 YWHAQP27348 245 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 PREPLQ4J6C6 727 aaPredicted RBP11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 WDR45BQ5MNZ6 344 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 SYCP2LQ5T4T6 812 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 BTBD8Q5XKL5 378 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 PAQR9Q6ZVX9 377 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 USP49Q70CQ1 688 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 DYMQ7RTS9 669 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 CHPFQ8IZ52 775 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 SCAMP5Q8TAC9 235 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 OVCA2Q8WZ82 227 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 SLITRK1Q96PX8 696 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 KIF2CQ99661 725 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 DPEP3Q9H4B8 488 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 PCIF1Q9H4Z3 704 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 GAREM1Q9H706 876 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 USP36Q9P275 1121 aaKnown RBP11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 CABIN1Q9Y6J0 2220 aa11.33□□□□□ -0.6
TM9SF1-210ENST00000530563 PTPRQQ9UMZ3 2332 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 GFRA2O00451 464 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 CLDN5O00501 218 aa11.32□□□□□ -0.6
TM9SF1-210ENST00000530563 NDUFS2O75306 463 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms