RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, human

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-223	ENST00000529986	ANKRD27	Q96NW4	1050 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	KCTD14	Q9BQ13	255 aa	Predicted RBP	7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	COA1	Q9GZY4	146 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	SYTL2	Q9HCH5	934 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	HEATR9	A2RTY3	570 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986		F8W810	466 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	KRT36	O76013	467 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	FAS	P25445	335 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	GCLC	P48506	637 aa	Predicted RBP	7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	ATP12A	P54707	1039 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	ITGA9	Q13797	1035 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	PGS1	Q32NB8	556 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	TYW3	Q6IPR3	259 aa	Known RBP	7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	STKLD1	Q8NE28	680 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	UTP15	Q8TED0	518 aa	Known RBP	7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	SCFD2	Q8WU76	684 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	TFB1M	Q8WVM0	346 aa	Known RBP	7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	ATXN2L	Q8WWM7	1075 aa	Known RBP	7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	KRT35	Q92764	455 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	MAML3	Q96JK9	1138 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	CDRT15	Q96T59	188 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	ARHGEF3	Q9NR81	526 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	COPG2	Q9UBF2	871 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	PNPLA7	Q6ZV29	1317 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	CNTNAP5	Q8WYK1	1306 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	MAP2K7	O14733	419 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	ADCY6	O43306	1168 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	CNOT3	O75175	753 aa	Known RBP	7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	ASMTL	O95671	621 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	PECAM1	P16284	738 aa	Predicted RBP	7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	SSTR1	P30872	391 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	SLC1A6	P48664	564 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	DGCR6	Q14129	220 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	POLD3	Q15054	466 aa	Predicted RBP	7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	GOLGA7B	Q2TAP0	167 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	EML3	Q32P44	896 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	ATP6AP1L	Q52LC2	224 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	DALRD3	Q5D0E6	543 aa	Known RBP	7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	ZNF57	Q68EA5	555 aa	Predicted RBP	7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	TTI2	Q6NXR4	508 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	STRA8	Q7Z7C7	330 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	SLC26A11	Q86WA9	606 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	WDR48	Q8TAF3	677 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	ZNF75CP	Q92670	426 aa	Predicted RBP	7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	ZNF333	Q96JL9	665 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	TNIP3	Q96KP6	325 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	DEPDC7	Q96QD5	511 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	KIAA1683	Q9H0B3	1180 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	KRT84	Q9NSB2	600 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	MAP2	P11137	1827 aa	Known RBP	7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	PSMD3	O43242	534 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	SLC37A4	O43826	429 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	FLT3	P36888	993 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	SLC20A2	Q08357	652 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	TRIM28	Q13263	835 aa	Known RBP	7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	BFSP2	Q13515	415 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	PDZK1	Q5T2W1	519 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	FAM81A	Q8TBF8	368 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	FIG4	Q92562	907 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	FAM84B	Q96KN1	310 aa	Predicted RBP	7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	FAM192A	Q9GZU8	254 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	TCF7L2	Q9NQB0	619 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	KLHL20	Q9Y2M5	609 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	TM9SF1	O15321	606 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	DCX	O43602	365 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	CSDE1	O75534	798 aa	Known RBP	7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	CPB1	P15086	417 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	RRM1	P23921	792 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	TOB1	P50616	345 aa	Predicted RBP	7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	PTEN	P60484	403 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	RPS7	P62081	194 aa	Known RBP	7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	SPP2	Q13103	211 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	INA	Q16352	499 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	AKIRIN2	Q53H80	203 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	LLGL2	Q6P1M3	1020 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	VN1R5	Q7Z5H4	357 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	APPL2	Q8NEU8	664 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	TRIM63	Q969Q1	353 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	RUSC1	Q9BVN2	902 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	CAPN10	Q9HC96	672 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	RNF112	Q9ULX5	631 aa		7.87	□□□□□ -1.15
CTNND1-223	ENST00000529986	PIK3CD	O00329	1044 aa		7.86	□□□□□ -1.15
CTNND1-223	ENST00000529986	TRIM13	O60858	407 aa		7.86	□□□□□ -1.15
CTNND1-223	ENST00000529986	CPSF4	O95639	269 aa	Known RBP	7.86	□□□□□ -1.15
CTNND1-223	ENST00000529986	SHBG	P04278	402 aa		7.86	□□□□□ -1.15
CTNND1-223	ENST00000529986	FAM86B2	P0C5J1	330 aa		7.86	□□□□□ -1.15
CTNND1-223	ENST00000529986	RARB	P10826	455 aa		7.86	□□□□□ -1.15
CTNND1-223	ENST00000529986	CCDC130	P13994	396 aa		7.86	□□□□□ -1.15
CTNND1-223	ENST00000529986	ADRA1D	P25100	572 aa		7.86	□□□□□ -1.15
CTNND1-223	ENST00000529986	NPEPPS	P55786	919 aa		7.86	□□□□□ -1.15
CTNND1-223	ENST00000529986	LSM3	P62310	102 aa	Known RBP	7.86	□□□□□ -1.15
CTNND1-223	ENST00000529986	TWF1	Q12792	350 aa		7.86	□□□□□ -1.15
CTNND1-223	ENST00000529986	GRB10	Q13322	594 aa		7.86	□□□□□ -1.15
CTNND1-223	ENST00000529986	ZSWIM7	Q19AV6	140 aa		7.86	□□□□□ -1.15
CTNND1-223	ENST00000529986	DDI2	Q5TDH0	399 aa		7.86	□□□□□ -1.15
CTNND1-223	ENST00000529986	AGAP9	Q5VTM2	703 aa		7.86	□□□□□ -1.15
CTNND1-223	ENST00000529986	C11orf88	Q6PI97	169 aa		7.86	□□□□□ -1.15
CTNND1-223	ENST00000529986	ANKS3	Q6ZW76	656 aa		7.86	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms