RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 DNAAF2Q9NVR5 837 aaKnown RBP17.07■□□□□ 0.32
COL16A1-216ENST00000529928 HSPBP1Q9NZL4 362 aa17.07■□□□□ 0.32
COL16A1-216ENST00000529928 NME7Q9Y5B8 376 aa17.07■□□□□ 0.32
COL16A1-216ENST00000529928 PCDH15Q96QU1 1955 aa17.06■□□□□ 0.32
COL16A1-216ENST00000529928 IGHV1OR15-9A0A0B4J2B8 117 aa17.06■□□□□ 0.32
COL16A1-216ENST00000529928 A0A1W2PQD8 194 aa17.06■□□□□ 0.32
COL16A1-216ENST00000529928 TUBP50607 506 aa17.06■□□□□ 0.32
COL16A1-216ENST00000529928 FAM193AP78312 1265 aa17.06■□□□□ 0.32
COL16A1-216ENST00000529928 SLC14A1Q13336 389 aa17.06■□□□□ 0.32
COL16A1-216ENST00000529928 ANO4Q32M45 955 aa17.06■□□□□ 0.32
COL16A1-216ENST00000529928 WDR72Q3MJ13 1102 aa17.06■□□□□ 0.32
COL16A1-216ENST00000529928 SNX30Q5VWJ9 437 aa17.06■□□□□ 0.32
COL16A1-216ENST00000529928 SDE2Q6IQ49 451 aa17.06■□□□□ 0.32
COL16A1-216ENST00000529928 RAB44Q7Z6P3 723 aaPredicted RBP17.06■□□□□ 0.32
COL16A1-216ENST00000529928 PROSER1Q86XN7 944 aa17.06■□□□□ 0.32
COL16A1-216ENST00000529928 BBS7Q8IWZ6 715 aa17.06■□□□□ 0.32
COL16A1-216ENST00000529928 CHCHD4Q8N4Q1 142 aa17.06■□□□□ 0.32
COL16A1-216ENST00000529928 DEFB119Q8N690 84 aa17.06■□□□□ 0.32
COL16A1-216ENST00000529928 B3GALNT2Q8NCR0 500 aa17.06■□□□□ 0.32
COL16A1-216ENST00000529928 CLIC6Q96NY7 704 aa17.06■□□□□ 0.32
COL16A1-216ENST00000529928 B3GNT5Q9BYG0 378 aa17.06■□□□□ 0.32
COL16A1-216ENST00000529928 DPEP3Q9H4B8 488 aa17.06■□□□□ 0.32
COL16A1-216ENST00000529928 STARD13Q9Y3M8 1113 aa17.06■□□□□ 0.32
COL16A1-216ENST00000529928 MYOFQ9NZM1 2061 aa17.06■□□□□ 0.32
COL16A1-216ENST00000529928 CACNA1EQ15878 2313 aa17.05■□□□□ 0.32
COL16A1-216ENST00000529928 ATP8B3O60423 1300 aa17.05■□□□□ 0.32
COL16A1-216ENST00000529928 VPS37CA5D8V6 355 aaPredicted RBP17.05■□□□□ 0.32
COL16A1-216ENST00000529928 A8MXQ7 604 aa17.05■□□□□ 0.32
COL16A1-216ENST00000529928 CLDN5O00501 218 aa17.05■□□□□ 0.32
COL16A1-216ENST00000529928 CST3P01034 146 aaPredicted RBP17.05■□□□□ 0.32
COL16A1-216ENST00000529928 DLATP10515 647 aaKnown RBP17.05■□□□□ 0.32
COL16A1-216ENST00000529928 CD59P13987 128 aa17.05■□□□□ 0.32
COL16A1-216ENST00000529928 TNNI1P19237 187 aa17.05■□□□□ 0.32
COL16A1-216ENST00000529928 SNRNP35Q16560 246 aaKnown RBP17.05■□□□□ 0.32
COL16A1-216ENST00000529928 SLC41A1Q8IVJ1 513 aa17.05■□□□□ 0.32
COL16A1-216ENST00000529928 HSPA12BQ96MM6 686 aa17.05■□□□□ 0.32
COL16A1-216ENST00000529928 FAM124BQ9H5Z6 455 aaPredicted RBP17.05■□□□□ 0.32
COL16A1-216ENST00000529928 CHORDC1Q9UHD1 332 aaPredicted RBP17.05■□□□□ 0.32
COL16A1-216ENST00000529928 CEP192Q8TEP8 1941 aa17.05■□□□□ 0.32
COL16A1-216ENST00000529928 ADAMTS9Q9P2N4 1935 aa17.05■□□□□ 0.32
COL16A1-216ENST00000529928 GON4LQ3T8J9 2241 aa17.05■□□□□ 0.32
COL16A1-216ENST00000529928 A0A1W2PQF6 199 aa17.04■□□□□ 0.32
COL16A1-216ENST00000529928 CUL4AQ13619 759 aa17.04■□□□□ 0.32
COL16A1-216ENST00000529928 SYCP2LQ5T4T6 812 aa17.04■□□□□ 0.32
COL16A1-216ENST00000529928 GRAMD4Q6IC98 578 aa17.04■□□□□ 0.32
COL16A1-216ENST00000529928 TMEM25Q86YD3 366 aa17.04■□□□□ 0.32
COL16A1-216ENST00000529928 CHPFQ8IZ52 775 aa17.04■□□□□ 0.32
COL16A1-216ENST00000529928 TRIML1Q8N9V2 468 aa17.04■□□□□ 0.32
COL16A1-216ENST00000529928 OR2I1PQ8NGU4 316 aa17.04■□□□□ 0.32
COL16A1-216ENST00000529928 CGRRF1Q99675 332 aa17.04■□□□□ 0.32
COL16A1-216ENST00000529928 NACA2Q9H009 215 aa17.04■□□□□ 0.32
COL16A1-216ENST00000529928 CCSER2Q9H7U1 834 aa17.04■□□□□ 0.32
COL16A1-216ENST00000529928 SUSD2Q9UGT4 822 aa17.04■□□□□ 0.32
COL16A1-216ENST00000529928 CYP8B1Q9UNU6 501 aa17.04■□□□□ 0.32
COL16A1-216ENST00000529928 PCDHB9Q9Y5E1 797 aa17.04■□□□□ 0.32
COL16A1-216ENST00000529928 TAF4O00268 1085 aa17.03■□□□□ 0.32
COL16A1-216ENST00000529928 STAU1O95793 577 aaKnown RBP17.03■□□□□ 0.32
COL16A1-216ENST00000529928 CAPNS1P04632 268 aa17.03■□□□□ 0.32
COL16A1-216ENST00000529928 NDUFV2P19404 249 aa17.03■□□□□ 0.32
COL16A1-216ENST00000529928 WASP42768 502 aa17.03■□□□□ 0.32
COL16A1-216ENST00000529928 SLC5A3P53794 718 aa17.03■□□□□ 0.32
COL16A1-216ENST00000529928 TRPC3Q13507 836 aa17.03■□□□□ 0.32
COL16A1-216ENST00000529928 PSMD6Q15008 389 aa17.03■□□□□ 0.32
COL16A1-216ENST00000529928 TRIP6Q15654 476 aaKnown RBP17.03■□□□□ 0.32
COL16A1-216ENST00000529928 EGFLAMQ63HQ2 1017 aa17.03■□□□□ 0.32
COL16A1-216ENST00000529928 MIB1Q86YT6 1006 aa17.03■□□□□ 0.32
COL16A1-216ENST00000529928 RGL4Q8IZJ4 473 aa17.03■□□□□ 0.32
COL16A1-216ENST00000529928 RDH13Q8NBN7 331 aa17.03■□□□□ 0.32
COL16A1-216ENST00000529928 GLIS3Q8NEA6 775 aa17.03■□□□□ 0.32
COL16A1-216ENST00000529928 SCAMP5Q8TAC9 235 aa17.03■□□□□ 0.32
COL16A1-216ENST00000529928 IPO4Q8TEX9 1081 aaKnown RBP17.03■□□□□ 0.32
COL16A1-216ENST00000529928 XPO6Q96QU8 1125 aaKnown RBP17.03■□□□□ 0.32
COL16A1-216ENST00000529928 KCNK16Q96T55 309 aa17.03■□□□□ 0.32
COL16A1-216ENST00000529928 PANK2Q9BZ23 570 aa17.03■□□□□ 0.32
COL16A1-216ENST00000529928 LRRC27Q9C0I9 530 aa17.03■□□□□ 0.32
COL16A1-216ENST00000529928 CD248Q9HCU0 757 aa17.03■□□□□ 0.32
COL16A1-216ENST00000529928 DMAP1Q9NPF5 467 aaPredicted RBP17.03■□□□□ 0.32
COL16A1-216ENST00000529928 DNAJC17Q9NVM6 304 aaKnown RBP17.03■□□□□ 0.32
COL16A1-216ENST00000529928 COMMD8Q9NX08 183 aa17.03■□□□□ 0.32
COL16A1-216ENST00000529928 IL37Q9NZH6 218 aa17.03■□□□□ 0.32
COL16A1-216ENST00000529928 NXF1Q9UBU9 619 aaKnown RBP17.03■□□□□ 0.32
COL16A1-216ENST00000529928 HCN2Q9UL51 889 aa17.03■□□□□ 0.32
COL16A1-216ENST00000529928 GTF3C3Q9Y5Q9 886 aa17.03■□□□□ 0.32
COL16A1-216ENST00000529928 MYO18AQ92614 2054 aaKnown RBP17.03■□□□□ 0.32
COL16A1-216ENST00000529928 DMXL2Q8TDJ6 3036 aa17.02■□□□□ 0.32
COL16A1-216ENST00000529928 A0A087X0B3 334 aa17.02■□□□□ 0.32
COL16A1-216ENST00000529928 FAM92AA1XBS5 289 aa17.02■□□□□ 0.32
COL16A1-216ENST00000529928 EIF3DO15371 548 aaKnown RBP eCLIP17.02■□□□□ 0.32
COL16A1-216ENST00000529928 SH3BP5O60239 455 aa17.02■□□□□ 0.32
COL16A1-216ENST00000529928 CACNG3O60359 315 aa17.02■□□□□ 0.32
COL16A1-216ENST00000529928 NDUFS2O75306 463 aa17.02■□□□□ 0.32
COL16A1-216ENST00000529928 GJB3O75712 270 aa17.02■□□□□ 0.32
COL16A1-216ENST00000529928 ZDHHC11BP0C7U3 371 aa17.02■□□□□ 0.32
COL16A1-216ENST00000529928 IRF1P10914 325 aa17.02■□□□□ 0.32
COL16A1-216ENST00000529928 GNSP15586 552 aa17.02■□□□□ 0.32
COL16A1-216ENST00000529928 PDCP20941 246 aa17.02■□□□□ 0.32
COL16A1-216ENST00000529928 ATICP31939 592 aa17.02■□□□□ 0.32
COL16A1-216ENST00000529928 HOXD13P35453 343 aa17.02■□□□□ 0.32
COL16A1-216ENST00000529928 PLEKHG6Q3KR16 790 aa17.02■□□□□ 0.32
COL16A1-216ENST00000529928 FAM35AQ86V20 835 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms