RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 PROSER3Q2NL68 480 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 LSM12Q3MHD2 195 aaKnown RBP8.29□□□□□ -1.08
C11orf88-203ENST00000529167 EFHC1Q5JVL4 640 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 DPY19L2P1Q6NXN4 242 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 PAOXQ6QHF9 649 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 C4orf22Q6V702 233 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 EEPD1Q7L9B9 569 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 ATG9AQ7Z3C6 839 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 TICAM1Q8IUC6 712 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 SLC38A6Q8IZM9 456 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 C12orf50Q8NA57 414 aaPredicted RBP8.29□□□□□ -1.08
C11orf88-203ENST00000529167 FANCBQ8NB91 859 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 GCNAQ96QF7 691 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 CCDC77Q9BR77 488 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 MROQ9BYG7 248 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 ZNF341Q9BYN7 854 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 HIPK3Q9H422 1215 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 ZFYVE28Q9HCC9 887 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 THAP1Q9NVV9 213 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 RBMX2Q9Y388 322 aaKnown RBP8.29□□□□□ -1.08
C11orf88-203ENST00000529167 CUL9Q8IWT3 2517 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 SCO2O43819 266 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 TSPAN1O60635 241 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 H2AFZP0C0S5 128 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 PCP11498 1178 aaKnown RBP8.29□□□□□ -1.08
C11orf88-203ENST00000529167 FCER1AP12319 257 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 RPA3P35244 121 aaPredicted RBP8.29□□□□□ -1.08
C11orf88-203ENST00000529167 CALCOCO2Q13137 446 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 CRHR2Q13324 411 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 LAPTM5Q13571 262 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 DOK7Q18PE1 504 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 AGAP7PQ5VUJ5 663 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 H2AFVQ71UI9 128 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 ZDHHC14Q8IZN3 488 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 PPM1KQ8N3J5 372 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 MINDY2Q8NBR6 621 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 PDZD8Q8NEN9 1154 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 FBXO27Q8NI29 283 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 SDCCAG3Q96C92 435 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 DCUN1D1Q96GG9 259 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 OXNAD1Q96HP4 312 aaPredicted RBP8.29□□□□□ -1.08
C11orf88-203ENST00000529167 WNK4Q96J92 1243 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 CDK5RAP3Q96JB5 506 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 TBCBQ99426 244 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 MTMR12Q9C0I1 747 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 FBXO6Q9NRD1 293 aaPredicted RBP8.29□□□□□ -1.08
C11orf88-203ENST00000529167 NINJ2Q9NZG7 142 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 ANKMY1Q9P2S6 941 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 VPS51Q9UID3 782 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 SCINQ9Y6U3 715 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 EMSYQ7Z589 1322 aa8.29□□□□□ -1.08
C11orf88-203ENST00000529167 A0A1W2PRG0 241 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 PABPN1LA6NDY0 278 aaKnown RBP8.28□□□□□ -1.08
C11orf88-203ENST00000529167 H3BRJ5 948 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 RIMBP2O15034 1052 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 SEC24DO94855 1032 aaPredicted RBP8.28□□□□□ -1.08
C11orf88-203ENST00000529167 S100BP04271 92 aaPredicted RBP8.28□□□□□ -1.08
C11orf88-203ENST00000529167 CTRB1P17538 263 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 GCAP28676 217 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 ADSLP30566 484 aaPredicted RBP8.28□□□□□ -1.08
C11orf88-203ENST00000529167 CPOXP36551 454 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 COILP38432 576 aaPredicted RBP8.28□□□□□ -1.08
C11orf88-203ENST00000529167 KRT76Q01546 638 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 CAV1Q03135 178 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 FUT2Q10981 343 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 CCNIQ14094 377 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 TRIP10Q15642 601 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 ALX1Q15699 326 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 TBCCQ15814 346 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 C15orf59Q2T9L4 293 aaPredicted RBP8.28□□□□□ -1.08
C11orf88-203ENST00000529167 ITPRIPL1Q6GPH6 555 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 CTRB2Q6GPI1 263 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 PGM2L1Q6PCE3 622 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 HEATR4Q86WZ0 1026 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 CADM3Q8N126 398 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 GUF1Q8N442 669 aaKnown RBP8.28□□□□□ -1.08
C11orf88-203ENST00000529167 ADAMTS16Q8TE57 1224 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 LRRC15Q8TF66 581 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 PYDC1Q8WXC3 89 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 CLPTM1LQ96KA5 538 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 RBM15Q96T37 977 aaKnown RBP eCLIP8.28□□□□□ -1.08
C11orf88-203ENST00000529167 SENP7Q9BQF6 1050 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 THTPAQ9BU02 230 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 VPS11Q9H270 941 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 POU2F3Q9UKI9 436 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 DTNAQ9Y4J8 743 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 PTCH2Q9Y6C5 1203 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 MKI67P46013 3256 aaKnown RBP8.28□□□□□ -1.08
C11orf88-203ENST00000529167 CAPN8A6NHC0 703 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 GOLGA8MH3BSY2 632 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 KPNA4O00629 521 aaPredicted RBP8.28□□□□□ -1.08
C11orf88-203ENST00000529167 FCHO1O14526 889 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 CHRNB2P17787 502 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 ALDH1A3P47895 512 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 HSPA13P48723 471 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 RALGDSQ12967 914 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 TUBA3CQ13748 450 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 GRIK5Q16478 980 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 PTPROQ16827 1216 aa8.28□□□□□ -1.08
C11orf88-203ENST00000529167 UNC5DQ6UXZ4 953 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms