RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 PABPC1LQ4VXU2 614 aaKnown RBP18.56■□□□□ 0.56
LTBP3-210ENST00000528516 CRLF3Q8IUI8 442 aa18.56■□□□□ 0.56
LTBP3-210ENST00000528516 ACTL9Q8TC94 416 aa18.56■□□□□ 0.56
LTBP3-210ENST00000528516 EPS8L1Q8TE68 723 aa18.56■□□□□ 0.56
LTBP3-210ENST00000528516 USP33Q8TEY7 942 aa18.56■□□□□ 0.56
LTBP3-210ENST00000528516 FAM163AQ96GL9 167 aaPredicted RBP18.56■□□□□ 0.56
LTBP3-210ENST00000528516 GMCL1Q96IK5 515 aa18.56■□□□□ 0.56
LTBP3-210ENST00000528516 KLHL4Q9C0H6 718 aa18.56■□□□□ 0.56
LTBP3-210ENST00000528516 HACL1Q9UJ83 578 aa18.56■□□□□ 0.56
LTBP3-210ENST00000528516 APPL1Q9UKG1 709 aa18.56■□□□□ 0.56
LTBP3-210ENST00000528516 PIK3CDO00329 1044 aa18.56■□□□□ 0.56
LTBP3-210ENST00000528516 PDE5AO76074 875 aa18.56■□□□□ 0.56
LTBP3-210ENST00000528516 ITGB3P05106 788 aa18.56■□□□□ 0.56
LTBP3-210ENST00000528516 CUL2Q13617 745 aa18.56■□□□□ 0.56
LTBP3-210ENST00000528516 TWF2Q6IBS0 349 aaKnown RBP18.56■□□□□ 0.56
LTBP3-210ENST00000528516 POTEAQ6S8J7 498 aa18.56■□□□□ 0.56
LTBP3-210ENST00000528516 PDGFDQ9GZP0 370 aaPredicted RBP18.56■□□□□ 0.56
LTBP3-210ENST00000528516 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.56■□□□□ 0.56
LTBP3-210ENST00000528516 ADCY3O60266 1144 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 MPP3Q13368 585 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 BMPR2Q13873 1038 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 DNAL1Q4LDG9 190 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 GRAMD4Q6IC98 578 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 ACAD11Q709F0 780 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 UNKQ9C0B0 810 aaKnown RBP18.55■□□□□ 0.56
LTBP3-210ENST00000528516 SMIM31A0A1B0GVY4 71 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 GJB1P08034 283 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 KRT7P08729 469 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 GEMIN4P57678 1058 aaKnown RBP18.55■□□□□ 0.56
LTBP3-210ENST00000528516 SIX1Q15475 284 aaPredicted RBP18.55■□□□□ 0.56
LTBP3-210ENST00000528516 MFSD7Q6UXD7 560 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 ZNF398Q8TD17 642 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 DGCR14Q96DF8 476 aaKnown RBP18.55■□□□□ 0.56
LTBP3-210ENST00000528516 ASNSD1Q9NWL6 643 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 UGCGQ16739 394 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 LRRC8BQ6P9F7 803 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 ETNPPLQ8TBG4 499 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 DENND1AQ8TEH3 1009 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 ZC3H7BQ9UGR2 993 aaKnown RBP18.55■□□□□ 0.56
LTBP3-210ENST00000528516 TLK1Q9UKI8 766 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 DNPEPQ9ULA0 475 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 PCDHGA4Q9Y5G9 962 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 MAGEB3O15480 346 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 RFX1P22670 979 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 AQP4P55087 323 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 HPCAP84074 193 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 OTUD4Q01804 1114 aaKnown RBP18.55■□□□□ 0.56
LTBP3-210ENST00000528516 TFDP2Q14188 446 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 ACAP1Q15027 740 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 LZICQ8WZA0 190 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 PTCD3Q96EY7 689 aaKnown RBP18.55■□□□□ 0.56
LTBP3-210ENST00000528516 APOL2Q9BQE5 337 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 Q9H521 79 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 NDUFA13Q9P0J0 144 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 SSX2IPQ9Y2D8 614 aa18.55■□□□□ 0.56
LTBP3-210ENST00000528516 CCDC166P0CW27 439 aa18.54■□□□□ 0.56
LTBP3-210ENST00000528516 FGFR1P11362 822 aa18.54■□□□□ 0.56
LTBP3-210ENST00000528516 TYK2P29597 1187 aa18.54■□□□□ 0.56
LTBP3-210ENST00000528516 TCF7P36402 384 aaPredicted RBP18.54■□□□□ 0.56
LTBP3-210ENST00000528516 NET1Q7Z628 596 aaPredicted RBP18.54■□□□□ 0.56
LTBP3-210ENST00000528516 ZCCHC9Q8N567 271 aaKnown RBP18.54■□□□□ 0.56
LTBP3-210ENST00000528516 POU5F2Q8N7G0 328 aa18.54■□□□□ 0.56
LTBP3-210ENST00000528516 CNBD2Q96M20 576 aa18.54■□□□□ 0.56
LTBP3-210ENST00000528516 PAFAH2Q99487 392 aa18.54■□□□□ 0.56
LTBP3-210ENST00000528516 NUMBLQ9Y6R0 609 aa18.54■□□□□ 0.56
LTBP3-210ENST00000528516 MYO9BQ13459 2157 aa18.54■□□□□ 0.56
LTBP3-210ENST00000528516 KNL1Q8NG31 2342 aa18.54■□□□□ 0.56
LTBP3-210ENST00000528516 COL4A1P02462 1669 aa18.54■□□□□ 0.56
LTBP3-210ENST00000528516 CCDC88AQ3V6T2 1871 aa18.54■□□□□ 0.56
LTBP3-210ENST00000528516 CHN2P52757 468 aa18.54■□□□□ 0.56
LTBP3-210ENST00000528516 DCTN2Q13561 401 aaKnown RBP18.54■□□□□ 0.56
LTBP3-210ENST00000528516 GPR162Q16538 588 aa18.54■□□□□ 0.56
LTBP3-210ENST00000528516 HEATR6Q6AI08 1181 aaKnown RBP18.54■□□□□ 0.56
LTBP3-210ENST00000528516 C12orf50Q8NA57 414 aaPredicted RBP18.54■□□□□ 0.56
LTBP3-210ENST00000528516 USP6NLQ92738 828 aa18.54■□□□□ 0.56
LTBP3-210ENST00000528516 PANX3Q96QZ0 392 aa18.54■□□□□ 0.56
LTBP3-210ENST00000528516 FHDC1Q9C0D6 1143 aaPredicted RBP18.54■□□□□ 0.56
LTBP3-210ENST00000528516 M0QZ92 97 aa18.54■□□□□ 0.56
LTBP3-210ENST00000528516 HSPA4LO95757 839 aa18.54■□□□□ 0.56
LTBP3-210ENST00000528516 VCLP18206 1134 aa18.54■□□□□ 0.56
LTBP3-210ENST00000528516 ZNF200P98182 395 aaPredicted RBP18.54■□□□□ 0.56
LTBP3-210ENST00000528516 DLG1Q12959 904 aa18.54■□□□□ 0.56
LTBP3-210ENST00000528516 DHDDSQ86SQ9 333 aa18.54■□□□□ 0.56
LTBP3-210ENST00000528516 RSPH3Q86UC2 560 aa18.54■□□□□ 0.56
LTBP3-210ENST00000528516 EFCAB3Q8N7B9 438 aa18.54■□□□□ 0.56
LTBP3-210ENST00000528516 FBXO27Q8NI29 283 aa18.54■□□□□ 0.56
LTBP3-210ENST00000528516 HDAC11Q96DB2 347 aa18.54■□□□□ 0.56
LTBP3-210ENST00000528516 ATP8B3O60423 1300 aa18.53■□□□□ 0.56
LTBP3-210ENST00000528516 ARHGAP10A1A4S6 786 aa18.53■□□□□ 0.56
LTBP3-210ENST00000528516 PDLIM1O00151 329 aa18.53■□□□□ 0.56
LTBP3-210ENST00000528516 WNT10BO00744 389 aa18.53■□□□□ 0.56
LTBP3-210ENST00000528516 GIPC1O14908 333 aa18.53■□□□□ 0.56
LTBP3-210ENST00000528516 BNIP3LO60238 219 aa18.53■□□□□ 0.56
LTBP3-210ENST00000528516 RPL7AP62424 266 aaKnown RBP18.53■□□□□ 0.56
LTBP3-210ENST00000528516 PTK7Q13308 1070 aa18.53■□□□□ 0.56
LTBP3-210ENST00000528516 ZNF554Q86TJ5 538 aa18.53■□□□□ 0.56
LTBP3-210ENST00000528516 HSD17B14Q9BPX1 270 aa18.53■□□□□ 0.56
LTBP3-210ENST00000528516 CCDC28BQ9BUN5 200 aa18.53■□□□□ 0.56
LTBP3-210ENST00000528516 AGO4Q9HCK5 861 aaKnown RBP18.53■□□□□ 0.56
LTBP3-210ENST00000528516 SLC7A8Q9UHI5 535 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms