RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 CLCN1P35523 988 aa12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 STAT1P42224 750 aa12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 USP46P62068 366 aa12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 GPC5P78333 572 aa12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 ARID5AQ03989 594 aa12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 GOLGA8FQ08AF8 430 aa12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 GOLGA8DPQ0D2H9 430 aa12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 TEAD2Q15562 447 aa12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 MLF2Q15773 248 aaPredicted RBP12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 PABPC1LQ4VXU2 614 aaKnown RBP12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 SPECC1LQ69YQ0 1117 aa12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 LAIR1Q6GTX8 287 aa12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 PARM1Q6UWI2 310 aa12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 PAQR9Q6ZVX9 377 aa12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 SLC47A2Q86VL8 602 aa12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 SCN4BQ8IWT1 228 aa12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 SHKBP1Q8TBC3 707 aa12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 C2orf15Q8WU43 125 aaKnown RBP12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 FGF13Q92913 245 aa12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 CYFIP2Q96F07 1278 aa12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 SMARCD1Q96GM5 515 aa12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 MRFAP1L1Q96HT8 127 aa12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 KXD1Q9BQD3 176 aa12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 DNAI2Q9GZS0 605 aa12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 SMG9Q9H0W8 520 aaKnown RBP12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 ABCB6Q9NP58 842 aa12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 SEMA4GQ9NTN9 838 aa12.21□□□□□ -0.45
CCDC90B-210ENST00000528149 COL4A2P08572 1712 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 NBEAQ8NFP9 2946 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 A0A1W2PQJ5 194 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 A0A1W2PRU2 124 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 M0QYV0 167 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 AP1G2O75843 785 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 MICAL2O94851 1124 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 FAM200BP0CF97 657 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 VDRP11473 427 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 LAMP2P13473 410 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 CD72P21854 359 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 FCARP24071 287 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 CASP14P31944 242 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 PDE6CP51160 858 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 SMARCB1Q12824 385 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 CFAP221Q4G0U5 840 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 FIGNQ5HY92 759 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 TAF3Q5VWG9 929 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 ARHGAP17Q68EM7 881 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 UNQ6494/PRO21346Q6UXR6 183 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 GAREM2Q75VX8 874 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 TMEM150AQ86TG1 271 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 NOP9Q86U38 636 aaKnown RBP12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 TTC30AQ86WT1 665 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 RIN3Q8TB24 985 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 SLC20A1Q8WUM9 679 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 DDX1Q92499 740 aaKnown RBP12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 FUBP3Q96I24 572 aaKnown RBP eCLIP12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 HNRNPABQ99729 332 aaKnown RBP12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 NUP58Q9BVL2 599 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 IL21Q9HBE4 155 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 LTB4R2Q9NPC1 389 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 TSPAN16Q9UKR8 245 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 RAB23Q9ULC3 237 aa12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.2□□□□□ -0.46
CCDC90B-210ENST00000528149 NUP210Q8TEM1 1887 aaPredicted RBP12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 FAM170AA1A519 330 aa12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 F8VP50 259 aa12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 LRP3O75074 770 aa12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 BEST1O76090 585 aa12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 RETP07949 1114 aa12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 CYP11B1P15538 503 aa12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 HMGA1P17096 107 aaKnown RBP12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 GRIK1P39086 918 aa12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 MAGEA9P43362 315 aa12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 MAGEA11P43364 429 aa12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 PGFP49763 221 aa12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 MAP3K7CLP57077 242 aa12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 PTK2Q05397 1052 aa12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 TRIM14Q14142 442 aa12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 ASIC2Q16515 512 aa12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 SFMBT2Q5VUG0 894 aa12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 ELMSAN1Q6PJG2 1045 aa12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 CLEC20AQ6ZU45 233 aa12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 PASD1Q8IV76 773 aa12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 EPS8L1Q8TE68 723 aa12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 SMOQ99835 787 aa12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 OSBPL6Q9BZF3 934 aa12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 DMAP1Q9NPF5 467 aaPredicted RBP12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 MYO6Q9UM54 1294 aa12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 CAPN11Q9UMQ6 739 aa12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 MRPS23Q9Y3D9 190 aaKnown RBP12.19□□□□□ -0.46
CCDC90B-210ENST00000528149 TULP2O00295 520 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 MFAP3LO75121 409 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 XYLBO75191 536 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 PRAMEF12O95522 483 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 C1RP00736 705 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 TDGF1P13385 188 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 TARSP26639 723 aaKnown RBP12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 ANXA13P27216 316 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 VIPR2P41587 438 aa12.18□□□□□ -0.46
CCDC90B-210ENST00000528149 ALDH1A3P47895 512 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms