RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 TTC38Q5R3I4 469 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 GKAP1Q5VSY0 366 aaPredicted RBP3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 IL23RQ5VWK5 629 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 TWF2Q6IBS0 349 aaKnown RBP3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 KRTAP5-11Q6L8G4 156 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 KLC3Q6P597 504 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 LVRNQ6Q4G3 990 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 FIP1L1Q6UN15 594 aaKnown RBP3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 BEND5Q7L4P6 421 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 FAM83AQ86UY5 434 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 ITPRIPQ8IWB1 547 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 FAM186BQ8IYM0 893 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 ZGPATQ8N5A5 531 aaKnown RBP3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 C2orf69Q8N8R5 385 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 CNBD1Q8NA66 436 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 NGDNQ8NEJ9 315 aaKnown RBP3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 CFAP61Q8NHU2 1237 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 SCARB1Q8WTV0 552 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 ZNF75CPQ92670 426 aaPredicted RBP3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 CDKL2Q92772 493 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 CASP10Q92851 521 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 C1orf74Q96LT6 269 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 TUBGCP5Q96RT8 1024 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 HAPLN3Q96S86 360 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 UQCC2Q9BRT2 126 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 SPATA5L1Q9BVQ7 753 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 BOCQ9BWV1 1114 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 NAA15Q9BXJ9 866 aaKnown RBP3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 OSBPL6Q9BZF3 934 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 MIS12Q9H081 205 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 VPS33BQ9H267 617 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 ANKZF1Q9H8Y5 726 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 GPR108Q9NPR9 543 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 ATAD3AQ9NVI7 634 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 GABBR1Q9UBS5 961 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 CFDP1Q9UEE9 299 aaPredicted RBP3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 STAP2Q9UGK3 403 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 MRPS23Q9Y3D9 190 aaKnown RBP3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 FAM32AQ9Y421 112 aaKnown RBP3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 PCDHGB3Q9Y5G1 929 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 ATP6V1DQ9Y5K8 247 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 NR2E3Q9Y5X4 410 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 COMMD3-BMI1R4GMX3 469 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 USP47Q96K76 1375 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 AQRO60306 1485 aaKnown RBP eCLIP3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 DENND4BO75064 1496 aaPredicted RBP3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 CCDC141Q6ZP82 1450 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 NRXN1Q9ULB1 1477 aa3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 ARHGEF17Q96PE2 2063 aaPredicted RBP3.96□□□□□ -1.78
CLNS1A-209ENST00000527299 GAKO14976 1311 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 FGD5Q6ZNL6 1462 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 RALGAPBQ86X10 1494 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 CARMIL1Q5VZK9 1371 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 LOC105371267A0A1B0GV96 52 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 KANSL1LA0AUZ9 987 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 SPECC1L-ADORA2AF8WAN1 911 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 H0Y3Z8 333 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 M0QX08 132 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 NRP1O14786 923 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 KMOO15229 486 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 PDPK1O15530 556 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 ASAP2O43150 1006 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 KCNJ13O60928 360 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 DNAJC6O75061 913 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 BCAR3O75815 825 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 NDUFA10O95299 355 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 STAMBPO95630 424 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 LDHCP07864 332 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 GNAI3P08754 354 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 GSTT2P0CG29 244 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 GSTT2BP0CG30 244 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 EPB41P11171 864 aaKnown RBP3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 CD53P19397 219 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 IBSPP21815 317 aaPredicted RBP3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 SP100P23497 879 aaPredicted RBP3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 PSMA3P25788 255 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 ATP5DP30049 168 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 HALP42357 657 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 PDE6CP51160 858 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 POLE2P56282 527 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 B2MP61769 119 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 NHLH1Q02575 133 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 ZNF268Q14587 947 aaPredicted RBP3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 WDR43Q15061 677 aaKnown RBP eCLIP3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 LONRF1Q17RB8 773 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 TMEM177Q53S58 311 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 ANKRD20A8PQ5CZ79 823 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 C10orf76Q5T2E6 689 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 RNF187Q5TA31 235 aaPredicted RBP3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 DEPDC1Q5TB30 811 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 DAB2IPQ5VWQ8 1189 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 NAA35Q5VZE5 725 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 ALS2CLQ60I27 953 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 SP5Q6BEB4 398 aaPredicted RBP3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 ANO7Q6IWH7 933 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 IRGCQ6NXR0 463 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 ZCCHC8Q6NZY4 707 aaKnown RBP3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 ABHD17CQ6PCB6 329 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 DGLUCYQ7Z3D6 616 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 HOMER1Q86YM7 354 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms