RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 COL9A1P20849 921 aa17.07■□□□□ 0.32
SSSCA1-202ENST00000526433 GNA15P30679 374 aa17.07■□□□□ 0.32
SSSCA1-202ENST00000526433 PLA2G4AP47712 749 aa17.07■□□□□ 0.32
SSSCA1-202ENST00000526433 PSEN1P49768 467 aa17.07■□□□□ 0.32
SSSCA1-202ENST00000526433 KPNA1P52294 538 aaPredicted RBP17.07■□□□□ 0.32
SSSCA1-202ENST00000526433 MLLT6P55198 1093 aaPredicted RBP17.07■□□□□ 0.32
SSSCA1-202ENST00000526433 TNK2Q07912 1038 aa17.07■□□□□ 0.32
SSSCA1-202ENST00000526433 USP4Q13107 963 aa17.07■□□□□ 0.32
SSSCA1-202ENST00000526433 FKBP15Q5T1M5 1219 aa17.07■□□□□ 0.32
SSSCA1-202ENST00000526433 PM20D1Q6GTS8 502 aa17.07■□□□□ 0.32
SSSCA1-202ENST00000526433 TMEM105Q8N8V8 129 aa17.07■□□□□ 0.32
SSSCA1-202ENST00000526433 SECISBP2LQ93073 1101 aaKnown RBP17.07■□□□□ 0.32
SSSCA1-202ENST00000526433 ULBP1Q9BZM6 244 aa17.07■□□□□ 0.32
SSSCA1-202ENST00000526433 FOXQ1Q9C009 403 aa17.07■□□□□ 0.32
SSSCA1-202ENST00000526433 DUS2Q9NX74 493 aaKnown RBP17.07■□□□□ 0.32
SSSCA1-202ENST00000526433 NAGPAQ9UK23 515 aa17.07■□□□□ 0.32
SSSCA1-202ENST00000526433 PIAS3Q9Y6X2 628 aa17.07■□□□□ 0.32
SSSCA1-202ENST00000526433 KIF26AQ9ULI4 1882 aaPredicted RBP17.07■□□□□ 0.32
SSSCA1-202ENST00000526433 SHISA7A6NL88 538 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 MAN2B1O00754 1011 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 THAP12O43422 761 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 MED7O43513 233 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 GABBR2O75899 941 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 ZBED1O96006 694 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 ATP1A3P13637 1013 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 CLCN1P35523 988 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 ATP5C1P36542 298 aaKnown RBP17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 RGS7P49802 495 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 RUNX3Q13761 415 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 DRAP1Q14919 205 aaPredicted RBP17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 PDGFRLQ15198 375 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 ITPRIPL2Q3MIP1 535 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 TRIM68Q6AZZ1 485 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 PMF1Q6P1K2 205 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 ZNF852Q6ZMS4 543 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 APTXQ7Z2E3 356 aaKnown RBP17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 ZNF276Q8N554 614 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 OSCP1Q8WVF1 389 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 NDRG1Q92597 394 aaKnown RBP17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 NELL2Q99435 816 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 NAA15Q9BXJ9 866 aaKnown RBP17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 NACA2Q9H009 215 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 LINC00597Q9H2U6 94 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 EBF3Q9H4W6 596 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 C8orf33Q9H7E9 229 aaPredicted RBP17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 PLCB1Q9NQ66 1216 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 CYLDQ9NQC7 956 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 HPS4Q9NQG7 708 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 CFAP97Q9P2B7 532 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 NUDT5Q9UKK9 219 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 SIT1Q9Y3P8 196 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 MTF2Q9Y483 593 aaPredicted RBP17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 FHOD1Q9Y613 1164 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 COL4A3Q01955 1670 aa17.06■□□□□ 0.32
SSSCA1-202ENST00000526433 FAM170BA6NMN3 283 aa17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 LGALS16A8MUM7 142 aa17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 RALAP11233 206 aa17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 LCP1P13796 627 aa17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 ARSAP15289 507 aa17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 UCHL3P15374 230 aa17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 GPD2P43304 727 aa17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 SOX9P48436 509 aa17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 IFNAR2P48551 515 aa17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 KLK7P49862 253 aa17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 UBXN1Q04323 297 aa17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 PTK2Q05397 1052 aa17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 ADIGQ0VDE8 80 aa17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 RAPGEF1Q13905 1077 aa17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 UBXN2BQ14CS0 331 aa17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 IQCB1Q15051 598 aa17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 ZSCAN23Q3MJ62 389 aa17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 DENND1BQ6P3S1 775 aa17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 DDX42Q86XP3 938 aaKnown RBP eCLIP17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 FAM71AQ8IYT1 594 aa17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 ARHGAP18Q8N392 663 aa17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 ZFRQ96KR1 1074 aaKnown RBP17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 HSFY1Q96LI6 401 aa17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 CLIC5Q9NZA1 410 aa17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 RAPGEFL1Q9UHV5 662 aa17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 WNT6Q9Y6F9 365 aa17.05■□□□□ 0.32
SSSCA1-202ENST00000526433 COL4A2P08572 1712 aa17.04■□□□□ 0.32
SSSCA1-202ENST00000526433 PIK3R2O00459 728 aa17.04■□□□□ 0.32
SSSCA1-202ENST00000526433 PNMA6AP0CW24 399 aaPredicted RBP17.04■□□□□ 0.32
SSSCA1-202ENST00000526433 YWHAGP61981 247 aaKnown RBP eCLIP17.04■□□□□ 0.32
SSSCA1-202ENST00000526433 SYCP1Q15431 976 aa17.04■□□□□ 0.32
SSSCA1-202ENST00000526433 EML3Q32P44 896 aa17.04■□□□□ 0.32
SSSCA1-202ENST00000526433 C10orf120Q5SQS8 335 aa17.04■□□□□ 0.32
SSSCA1-202ENST00000526433 RALGPS2Q86X27 583 aaPredicted RBP17.04■□□□□ 0.32
SSSCA1-202ENST00000526433 SIX6OS1Q8N1H7 587 aa17.04■□□□□ 0.32
SSSCA1-202ENST00000526433 KIAA1958Q8N8K9 716 aa17.04■□□□□ 0.32
SSSCA1-202ENST00000526433 PJA1Q8NG27 643 aa17.04■□□□□ 0.32
SSSCA1-202ENST00000526433 FAM3CQ92520 227 aa17.04■□□□□ 0.32
SSSCA1-202ENST00000526433 KLF16Q9BXK1 252 aaPredicted RBP17.04■□□□□ 0.32
SSSCA1-202ENST00000526433 STK33Q9BYT3 514 aa17.04■□□□□ 0.32
SSSCA1-202ENST00000526433 OSBPL6Q9BZF3 934 aa17.04■□□□□ 0.32
SSSCA1-202ENST00000526433 GANQ9H2C0 597 aa17.04■□□□□ 0.32
SSSCA1-202ENST00000526433 LTB4R2Q9NPC1 389 aa17.04■□□□□ 0.32
SSSCA1-202ENST00000526433 CNGB3Q9NQW8 809 aa17.04■□□□□ 0.32
SSSCA1-202ENST00000526433 DNMT3LQ9UJW3 386 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms