RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 AIFM3Q96NN9 605 aa5.02□□□□□ -1.61
CSDE1-210ENST00000525878 ZNF518BQ9C0D4 1074 aa5.02□□□□□ -1.61
CSDE1-210ENST00000525878 A1CFQ9NQ94 594 aaKnown RBP5.02□□□□□ -1.61
CSDE1-210ENST00000525878 AASDHPPTQ9NRN7 309 aa5.02□□□□□ -1.61
CSDE1-210ENST00000525878 MGAT4CQ9UBM8 478 aa5.02□□□□□ -1.61
CSDE1-210ENST00000525878 PAXBP1Q9Y5B6 917 aa5.02□□□□□ -1.61
CSDE1-210ENST00000525878 CD3EAPO15446 510 aaKnown RBP5.01□□□□□ -1.61
CSDE1-210ENST00000525878 PHGDHO43175 533 aaKnown RBP5.01□□□□□ -1.61
CSDE1-210ENST00000525878 ME1P48163 572 aa5.01□□□□□ -1.61
CSDE1-210ENST00000525878 RPS13P62277 151 aaKnown RBP5.01□□□□□ -1.61
CSDE1-210ENST00000525878 ERV3-1Q14264 604 aa5.01□□□□□ -1.61
CSDE1-210ENST00000525878 MICU3Q86XE3 530 aa5.01□□□□□ -1.61
CSDE1-210ENST00000525878 COL23A1Q86Y22 540 aaPredicted RBP5.01□□□□□ -1.61
CSDE1-210ENST00000525878 ANKRD13BQ86YJ7 626 aa5.01□□□□□ -1.61
CSDE1-210ENST00000525878 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.01□□□□□ -1.61
CSDE1-210ENST00000525878 MPP5Q8N3R9 675 aa5.01□□□□□ -1.61
CSDE1-210ENST00000525878 OR56A3Q8NH54 315 aa5.01□□□□□ -1.61
CSDE1-210ENST00000525878 IL31RAQ8NI17 732 aa5.01□□□□□ -1.61
CSDE1-210ENST00000525878 SLC35G2Q8TBE7 412 aa5.01□□□□□ -1.61
CSDE1-210ENST00000525878 EDC3Q96F86 508 aaKnown RBP5.01□□□□□ -1.61
CSDE1-210ENST00000525878 CAMK1GQ96NX5 476 aa5.01□□□□□ -1.61
CSDE1-210ENST00000525878 TAAR9Q96RI9 348 aa5.01□□□□□ -1.61
CSDE1-210ENST00000525878 ACO2Q99798 780 aaKnown RBP5.01□□□□□ -1.61
CSDE1-210ENST00000525878 BRINP2Q9C0B6 783 aa5.01□□□□□ -1.61
CSDE1-210ENST00000525878 WWOXQ9NZC7 414 aa5.01□□□□□ -1.61
CSDE1-210ENST00000525878 TTC3P53804 2025 aa5.01□□□□□ -1.61
CSDE1-210ENST00000525878 CCP110O43303 1012 aa5□□□□□ -1.61
CSDE1-210ENST00000525878 SMAD6O43541 496 aaKnown RBP5□□□□□ -1.61
CSDE1-210ENST00000525878 SRGAP2O75044 1071 aa5□□□□□ -1.61
CSDE1-210ENST00000525878 HTR6P50406 440 aa5□□□□□ -1.61
CSDE1-210ENST00000525878 KCNB1Q14721 858 aa5□□□□□ -1.61
CSDE1-210ENST00000525878 INSCQ1MX18 579 aa5□□□□□ -1.61
CSDE1-210ENST00000525878 ANO6Q4KMQ2 910 aa5□□□□□ -1.61
CSDE1-210ENST00000525878 VSTM1Q6UX27 236 aa5□□□□□ -1.61
CSDE1-210ENST00000525878 CHPFQ8IZ52 775 aa5□□□□□ -1.61
CSDE1-210ENST00000525878 SPSB4Q96A44 273 aa5□□□□□ -1.61
CSDE1-210ENST00000525878 PPP1R9BQ96SB3 815 aa5□□□□□ -1.61
CSDE1-210ENST00000525878 TRMOQ9BU70 441 aa5□□□□□ -1.61
CSDE1-210ENST00000525878 NMRK2Q9NPI5 230 aa5□□□□□ -1.61
CSDE1-210ENST00000525878 RGS17Q9UGC6 210 aaPredicted RBP5□□□□□ -1.61
CSDE1-210ENST00000525878 MAFFQ9ULX9 164 aa5□□□□□ -1.61
CSDE1-210ENST00000525878 ZSCAN21Q9Y5A6 473 aaPredicted RBP5□□□□□ -1.61
CSDE1-210ENST00000525878 HS3ST3B1Q9Y662 390 aa5□□□□□ -1.61
CSDE1-210ENST00000525878 MBD3L4A6NDZ8 208 aaPredicted RBP4.99□□□□□ -1.61
CSDE1-210ENST00000525878 MBD3L3A6NE82 208 aaPredicted RBP4.99□□□□□ -1.61
CSDE1-210ENST00000525878 TBX3O15119 743 aa4.99□□□□□ -1.61
CSDE1-210ENST00000525878 CRYABP02511 175 aaKnown RBP4.99□□□□□ -1.61
CSDE1-210ENST00000525878 FGF2P09038 288 aa4.99□□□□□ -1.61
CSDE1-210ENST00000525878 HSPA6P17066 643 aa4.99□□□□□ -1.61
CSDE1-210ENST00000525878 MCM5P33992 734 aa4.99□□□□□ -1.61
CSDE1-210ENST00000525878 HSF1Q00613 529 aa4.99□□□□□ -1.61
CSDE1-210ENST00000525878 NPY5RQ15761 445 aa4.99□□□□□ -1.61
CSDE1-210ENST00000525878 KCTD20Q7Z5Y7 419 aa4.99□□□□□ -1.61
CSDE1-210ENST00000525878 PIM3Q86V86 326 aa4.99□□□□□ -1.61
CSDE1-210ENST00000525878 C12orf76Q8N812 135 aaPredicted RBP4.99□□□□□ -1.61
CSDE1-210ENST00000525878 MPLKIPQ8TAP9 179 aa4.99□□□□□ -1.61
CSDE1-210ENST00000525878 ZCRB1Q8TBF4 217 aaKnown RBP4.99□□□□□ -1.61
CSDE1-210ENST00000525878 ZBTB45Q96K62 511 aaPredicted RBP4.99□□□□□ -1.61
CSDE1-210ENST00000525878 ZBTB40Q9NUA8 1239 aa4.99□□□□□ -1.61
CSDE1-210ENST00000525878 LOC102723971A0A1B0GUV8 181 aa4.98□□□□□ -1.61
CSDE1-210ENST00000525878 TRIM43BA6NCK2 446 aa4.98□□□□□ -1.61
CSDE1-210ENST00000525878 B4DGG1 531 aa4.98□□□□□ -1.61
CSDE1-210ENST00000525878 H3BNX3 289 aa4.98□□□□□ -1.61
CSDE1-210ENST00000525878 AGPSO00116 658 aa4.98□□□□□ -1.61
CSDE1-210ENST00000525878 CLIC1O00299 241 aa4.98□□□□□ -1.61
CSDE1-210ENST00000525878 EXOC5O00471 708 aa4.98□□□□□ -1.61
CSDE1-210ENST00000525878 RRP9O43818 475 aaKnown RBP4.98□□□□□ -1.61
CSDE1-210ENST00000525878 TULP3O75386 442 aa4.98□□□□□ -1.61
CSDE1-210ENST00000525878 TUSC2O75896 110 aa4.98□□□□□ -1.61
CSDE1-210ENST00000525878 TNFRSF1BP20333 461 aa4.98□□□□□ -1.61
CSDE1-210ENST00000525878 MCL1Q07820 350 aa4.98□□□□□ -1.61
CSDE1-210ENST00000525878 SLC14A1Q13336 389 aa4.98□□□□□ -1.61
CSDE1-210ENST00000525878 SEMA3AQ14563 771 aa4.98□□□□□ -1.61
CSDE1-210ENST00000525878 MFSD13AQ14CX5 517 aa4.98□□□□□ -1.61
CSDE1-210ENST00000525878 NPNTQ6UXI9 565 aa4.98□□□□□ -1.61
CSDE1-210ENST00000525878 PELI3Q8N2H9 469 aa4.98□□□□□ -1.61
CSDE1-210ENST00000525878 ACRBPQ8NEB7 543 aa4.98□□□□□ -1.61
CSDE1-210ENST00000525878 TRIM43Q96BQ3 446 aaPredicted RBP4.98□□□□□ -1.61
CSDE1-210ENST00000525878 FAM234AQ9H0X4 552 aa4.98□□□□□ -1.61
CSDE1-210ENST00000525878 DHX36Q9H2U1 1008 aaKnown RBP4.98□□□□□ -1.61
CSDE1-210ENST00000525878 STK32BQ9NY57 414 aa4.98□□□□□ -1.61
CSDE1-210ENST00000525878 SEMA5BQ9P283 1151 aa4.98□□□□□ -1.61
CSDE1-210ENST00000525878 SQORQ9Y6N5 450 aa4.98□□□□□ -1.61
CSDE1-210ENST00000525878 A8MVJ9 347 aa4.97□□□□□ -1.61
CSDE1-210ENST00000525878 RASAL1O95294 804 aa4.97□□□□□ -1.61
CSDE1-210ENST00000525878 MTHFSP49914 203 aa4.97□□□□□ -1.61
CSDE1-210ENST00000525878 YPEL5P62699 121 aa4.97□□□□□ -1.61
CSDE1-210ENST00000525878 DEUP1Q05D60 604 aa4.97□□□□□ -1.61
CSDE1-210ENST00000525878 MTX1Q13505 466 aa4.97□□□□□ -1.61
CSDE1-210ENST00000525878 PIN1Q13526 163 aaPredicted RBP4.97□□□□□ -1.61
CSDE1-210ENST00000525878 ZNF750Q32MQ0 723 aa4.97□□□□□ -1.61
CSDE1-210ENST00000525878 SLC9C1Q4G0N8 1177 aa4.97□□□□□ -1.61
CSDE1-210ENST00000525878 CACHD1Q5VU97 1274 aa4.97□□□□□ -1.61
CSDE1-210ENST00000525878 SWSAP1Q6NVH7 229 aa4.97□□□□□ -1.61
CSDE1-210ENST00000525878 DLK2Q6UY11 383 aa4.97□□□□□ -1.61
CSDE1-210ENST00000525878 MAEAQ7L5Y9 396 aa4.97□□□□□ -1.61
CSDE1-210ENST00000525878 OVCH2Q7RTZ1 564 aa4.97□□□□□ -1.61
CSDE1-210ENST00000525878 SMRP1Q8NCR6 262 aa4.97□□□□□ -1.61
CSDE1-210ENST00000525878 SUCLG2Q96I99 432 aa4.97□□□□□ -1.61
CSDE1-210ENST00000525878 HIC2Q96JB3 615 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms