RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 ASNSD1Q9NWL6 643 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.04□□□□□ -1.28
PVT1-217ENST00000523190 SPG21Q9NZD8 308 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 MTRRQ9UBK8 725 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 RNF14Q9UBS8 474 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 PCSK1NQ9UHG2 260 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.04□□□□□ -1.28
PVT1-217ENST00000523190 CDY1Q9Y6F8 540 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 SLC4A7Q9Y6M7 1214 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 DNAH12Q6ZR08 3092 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 PATJQ8NI35 1801 aa7.04□□□□□ -1.28
PVT1-217ENST00000523190 PCNTO95613 3336 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 WDR27A2RRH5 827 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 LCHNA4D1U4 455 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 YJEFN3A6XGL0 299 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 E7ENQ6 273 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 SART1O43290 800 aaKnown RBP7.03□□□□□ -1.28
PVT1-217ENST00000523190 SOAT2O75908 522 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 TRUB2O95900 331 aaKnown RBP7.03□□□□□ -1.28
PVT1-217ENST00000523190 ZBED1O96006 694 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 FGGP02679 453 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 LTFP02788 710 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 URODP06132 367 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 LINC00271P0C7V0 271 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 ATP2A2P16615 1042 aaKnown RBP7.03□□□□□ -1.28
PVT1-217ENST00000523190 DESP17661 470 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 DNAJB2P25686 324 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 IL1R2P27930 398 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 MIPP30301 263 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 OR1D2P34982 312 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 PPM1AP35813 382 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 MAGEA11P43364 429 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 PTPN9P43378 593 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 ATXN1P54253 815 aaKnown RBP7.03□□□□□ -1.28
PVT1-217ENST00000523190 DSG1Q02413 1049 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 GPR17Q13304 367 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 SMC1AQ14683 1233 aaKnown RBP7.03□□□□□ -1.28
PVT1-217ENST00000523190 ACAP1Q15027 740 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 DDR2Q16832 855 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 HADHQ16836 314 aaKnown RBP7.03□□□□□ -1.28
PVT1-217ENST00000523190 SMTNL2Q2TAL5 461 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 MGAT5BQ3V5L5 792 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 LRRC38Q5VT99 294 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 OTUD1Q5VV17 481 aaPredicted RBP7.03□□□□□ -1.28
PVT1-217ENST00000523190 SCYL2Q6P3W7 929 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 VSTM1Q6UX27 236 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 BHLHA9Q7RTU4 235 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 DDX53Q86TM3 631 aaKnown RBP7.03□□□□□ -1.28
PVT1-217ENST00000523190 CCDC50Q8IVM0 306 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 KATNAL2Q8IYT4 538 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 SCAMP5Q8TAC9 235 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 SPPL2BQ8TCT7 592 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 AUTS2Q8WXX7 1259 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 UBXN4Q92575 508 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 RPGRIP1Q96KN7 1286 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 SLC2A13Q96QE2 648 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 RAD9AQ99638 391 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 SEPT5Q99719 369 aaPredicted RBP7.03□□□□□ -1.28
PVT1-217ENST00000523190 HERPUD2Q9BSE4 406 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 DDX23Q9BUQ8 820 aaKnown RBP7.03□□□□□ -1.28
PVT1-217ENST00000523190 AP1M1Q9BXS5 423 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 OXCT2Q9BYC2 517 aaPredicted RBP7.03□□□□□ -1.28
PVT1-217ENST00000523190 ADAM33Q9BZ11 813 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 POPDC2Q9HBU9 364 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 PNPLA8Q9NP80 782 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 AAASQ9NRG9 546 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 RBM12Q9NTZ6 932 aaKnown RBP7.03□□□□□ -1.28
PVT1-217ENST00000523190 GPATCH2LQ9NWQ4 482 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 DDX56Q9NY93 547 aaKnown RBP7.03□□□□□ -1.28
PVT1-217ENST00000523190 TTC7AQ9ULT0 858 aaPredicted RBP7.03□□□□□ -1.28
PVT1-217ENST00000523190 USP18Q9UMW8 372 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 SLC27A5Q9Y2P5 690 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 INSL6Q9Y581 213 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 PCDHB12Q9Y5F1 795 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 BACE2Q9Y5Z0 518 aa7.03□□□□□ -1.28
PVT1-217ENST00000523190 CEP350Q5VT06 3117 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 SYNJ2BP-COX16A0A087WUM0 186 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 TCRBV7S2A1N4TA0A589 114 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 LRRD1A4D1F6 860 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 CARNS1A5YM72 827 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 KRIT1O00522 736 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 TNFRSF10BO14763 440 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 CAPN9O14815 690 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 TLL1O43897 1013 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 PRPSAP2O60256 369 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 FGF18O76093 207 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 CSPG5O95196 566 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 ZRANB2O95218 330 aaKnown RBP eCLIP7.02□□□□□ -1.29
PVT1-217ENST00000523190 FYNP06241 537 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 GLI1P08151 1106 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 KRT7P08729 469 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 RHOXF2BP0C7M4 288 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 RARAP10276 462 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 HAPLN1P10915 354 aaPredicted RBP7.02□□□□□ -1.29
PVT1-217ENST00000523190 RALAP11233 206 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 CA8P35219 290 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 CTNNB1P35222 781 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 NOS2P35228 1153 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 PCK1P35558 622 aa7.02□□□□□ -1.29
PVT1-217ENST00000523190 MATKP42679 507 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms