RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 VWA3BQ502W6 1294 aa17.26■□□□□ 0.35
PABPC1-221ENST00000522720 PKDCCQ504Y2 493 aa17.26■□□□□ 0.35
PABPC1-221ENST00000522720 SCD5Q86SK9 330 aa17.26■□□□□ 0.35
PABPC1-221ENST00000522720 DDX42Q86XP3 938 aaKnown RBP eCLIP17.26■□□□□ 0.35
PABPC1-221ENST00000522720 C1orf210Q8IVY1 113 aa17.26■□□□□ 0.35
PABPC1-221ENST00000522720 CPA6Q8N4T0 437 aa17.26■□□□□ 0.35
PABPC1-221ENST00000522720 UBA3Q8TBC4 463 aa17.26■□□□□ 0.35
PABPC1-221ENST00000522720 ATP2A3Q93084 1043 aa17.26■□□□□ 0.35
PABPC1-221ENST00000522720 ZFRQ96KR1 1074 aaKnown RBP17.26■□□□□ 0.35
PABPC1-221ENST00000522720 TUBGCP2Q9BSJ2 902 aa17.26■□□□□ 0.35
PABPC1-221ENST00000522720 NDST4Q9H3R1 872 aa17.26■□□□□ 0.35
PABPC1-221ENST00000522720 ECT2Q9H8V3 914 aa17.26■□□□□ 0.35
PABPC1-221ENST00000522720 LMAN1LQ9HAT1 526 aa17.26■□□□□ 0.35
PABPC1-221ENST00000522720 NMUR1Q9HB89 426 aa17.26■□□□□ 0.35
PABPC1-221ENST00000522720 ANO10Q9NW15 660 aa17.26■□□□□ 0.35
PABPC1-221ENST00000522720 OSER1Q9NX31 292 aa17.26■□□□□ 0.35
PABPC1-221ENST00000522720 CFAP97Q9P2B7 532 aa17.26■□□□□ 0.35
PABPC1-221ENST00000522720 NFE2L3Q9Y4A8 694 aa17.26■□□□□ 0.35
PABPC1-221ENST00000522720 A0A1W2PQH9 124 aa17.25■□□□□ 0.35
PABPC1-221ENST00000522720 KCNJ18B7U540 433 aa17.25■□□□□ 0.35
PABPC1-221ENST00000522720 TULP2O00295 520 aa17.25■□□□□ 0.35
PABPC1-221ENST00000522720 SLC9A3R1O14745 358 aaPredicted RBP17.25■□□□□ 0.35
PABPC1-221ENST00000522720 PRKCSHP14314 528 aaPredicted RBP17.25■□□□□ 0.35
PABPC1-221ENST00000522720 MFAP3P55082 362 aa17.25■□□□□ 0.35
PABPC1-221ENST00000522720 AMPD2Q01433 879 aa17.25■□□□□ 0.35
PABPC1-221ENST00000522720 KCNJ12Q14500 433 aa17.25■□□□□ 0.35
PABPC1-221ENST00000522720 HSP90AA4PQ58FG1 418 aa17.25■□□□□ 0.35
PABPC1-221ENST00000522720 MIIPQ5JXC2 388 aa17.25■□□□□ 0.35
PABPC1-221ENST00000522720 KLHDC10Q6PID8 442 aa17.25■□□□□ 0.35
PABPC1-221ENST00000522720 ZNF276Q8N554 614 aa17.25■□□□□ 0.35
PABPC1-221ENST00000522720 CHFRQ96EP1 664 aa17.25■□□□□ 0.35
PABPC1-221ENST00000522720 ZSWIM1Q9BR11 485 aa17.25■□□□□ 0.35
PABPC1-221ENST00000522720 NACA2Q9H009 215 aa17.25■□□□□ 0.35
PABPC1-221ENST00000522720 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.25■□□□□ 0.35
PABPC1-221ENST00000522720 APEX2Q9UBZ4 518 aa17.25■□□□□ 0.35
PABPC1-221ENST00000522720 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.25■□□□□ 0.35
PABPC1-221ENST00000522720 MYOFQ9NZM1 2061 aa17.24■□□□□ 0.35
PABPC1-221ENST00000522720 E2F8A0AVK6 867 aa17.24■□□□□ 0.35
PABPC1-221ENST00000522720 TBX18O95935 607 aa17.24■□□□□ 0.35
PABPC1-221ENST00000522720 SETSIPP0DME0 302 aa17.24■□□□□ 0.35
PABPC1-221ENST00000522720 RARGP13631 454 aa17.24■□□□□ 0.35
PABPC1-221ENST00000522720 BRD2P25440 801 aaKnown RBP17.24■□□□□ 0.35
PABPC1-221ENST00000522720 EEF1GP26641 437 aaKnown RBP17.24■□□□□ 0.35
PABPC1-221ENST00000522720 GJA4P35212 333 aa17.24■□□□□ 0.35
PABPC1-221ENST00000522720 ATP5C1P36542 298 aaKnown RBP17.24■□□□□ 0.35
PABPC1-221ENST00000522720 PLA2G4AP47712 749 aa17.24■□□□□ 0.35
PABPC1-221ENST00000522720 NR1H3Q13133 447 aa17.24■□□□□ 0.35
PABPC1-221ENST00000522720 PON2Q15165 354 aa17.24■□□□□ 0.35
PABPC1-221ENST00000522720 TCP11X2Q5H9J9 407 aa17.24■□□□□ 0.35
PABPC1-221ENST00000522720 SMYD5Q6GMV2 418 aa17.24■□□□□ 0.35
PABPC1-221ENST00000522720 PM20D1Q6GTS8 502 aa17.24■□□□□ 0.35
PABPC1-221ENST00000522720 GJB7Q6PEY0 223 aa17.24■□□□□ 0.35
PABPC1-221ENST00000522720 ADGRG2Q8IZP9 1017 aa17.24■□□□□ 0.35
PABPC1-221ENST00000522720 ATOH1Q92858 354 aaPredicted RBP17.24■□□□□ 0.35
PABPC1-221ENST00000522720 CHRDQ9H2X0 955 aa17.24■□□□□ 0.35
PABPC1-221ENST00000522720 SPATA6Q9NWH7 488 aaPredicted RBP17.24■□□□□ 0.35
PABPC1-221ENST00000522720 CLIC5Q9NZA1 410 aa17.24■□□□□ 0.35
PABPC1-221ENST00000522720 TMEM63CQ9P1W3 806 aa17.24■□□□□ 0.35
PABPC1-221ENST00000522720 NAGPAQ9UK23 515 aa17.24■□□□□ 0.35
PABPC1-221ENST00000522720 TRDMT1O14717 391 aaKnown RBP17.23■□□□□ 0.35
PABPC1-221ENST00000522720 NFATC1O95644 943 aa17.23■□□□□ 0.35
PABPC1-221ENST00000522720 ZBED1O96006 694 aa17.23■□□□□ 0.35
PABPC1-221ENST00000522720 CALCAP01258 141 aa17.23■□□□□ 0.35
PABPC1-221ENST00000522720 KRT5P13647 590 aa17.23■□□□□ 0.35
PABPC1-221ENST00000522720 TKTL1P51854 596 aa17.23■□□□□ 0.35
PABPC1-221ENST00000522720 APBA1Q02410 837 aa17.23■□□□□ 0.35
PABPC1-221ENST00000522720 LRRC32Q14392 662 aa17.23■□□□□ 0.35
PABPC1-221ENST00000522720 STX1AQ16623 288 aa17.23■□□□□ 0.35
PABPC1-221ENST00000522720 DGKKQ5KSL6 1271 aa17.23■□□□□ 0.35
PABPC1-221ENST00000522720 MAMSTRQ6ZN01 415 aa17.23■□□□□ 0.35
PABPC1-221ENST00000522720 MAML2Q8IZL2 1156 aaPredicted RBP17.23■□□□□ 0.35
PABPC1-221ENST00000522720 ARHGAP18Q8N392 663 aa17.23■□□□□ 0.35
PABPC1-221ENST00000522720 SLC35F5Q8WV83 523 aa17.23■□□□□ 0.35
PABPC1-221ENST00000522720 KCTD13Q8WZ19 329 aa17.23■□□□□ 0.35
PABPC1-221ENST00000522720 IER2Q9BTL4 223 aa17.23■□□□□ 0.35
PABPC1-221ENST00000522720 KLF16Q9BXK1 252 aaPredicted RBP17.23■□□□□ 0.35
PABPC1-221ENST00000522720 LRRC4Q9HBW1 653 aa17.23■□□□□ 0.35
PABPC1-221ENST00000522720 SIX2Q9NPC8 291 aa17.23■□□□□ 0.35
PABPC1-221ENST00000522720 TBC1D14Q9P2M4 693 aa17.23■□□□□ 0.35
PABPC1-221ENST00000522720 ATG2BQ96BY7 2078 aa17.22■□□□□ 0.35
PABPC1-221ENST00000522720 LAMTOR5O43504 91 aa17.22■□□□□ 0.35
PABPC1-221ENST00000522720 RALAP11233 206 aa17.22■□□□□ 0.35
PABPC1-221ENST00000522720 MTAPQ13126 283 aa17.22■□□□□ 0.35
PABPC1-221ENST00000522720 CCINQ13939 588 aa17.22■□□□□ 0.35
PABPC1-221ENST00000522720 ARHGAP44Q17R89 818 aa17.22■□□□□ 0.35
PABPC1-221ENST00000522720 TMEM196Q5HYL7 178 aa17.22■□□□□ 0.35
PABPC1-221ENST00000522720 CDKAL1Q5VV42 579 aa17.22■□□□□ 0.35
PABPC1-221ENST00000522720 C11orf57Q6ZUT1 292 aaPredicted RBP17.22■□□□□ 0.35
PABPC1-221ENST00000522720 TADA2BQ86TJ2 420 aa17.22■□□□□ 0.35
PABPC1-221ENST00000522720 SYNPOQ8N3V7 929 aa17.22■□□□□ 0.35
PABPC1-221ENST00000522720 OTUB2Q96DC9 234 aa17.22■□□□□ 0.35
PABPC1-221ENST00000522720 CDK5RAP1Q96SZ6 601 aaKnown RBP17.22■□□□□ 0.35
PABPC1-221ENST00000522720 ULBP1Q9BZM6 244 aa17.22■□□□□ 0.35
PABPC1-221ENST00000522720 DNMT3LQ9UJW3 386 aa17.22■□□□□ 0.35
PABPC1-221ENST00000522720 NUDT5Q9UKK9 219 aa17.22■□□□□ 0.35
PABPC1-221ENST00000522720 SH3BP1Q9Y3L3 701 aa17.22■□□□□ 0.35
PABPC1-221ENST00000522720 BECN2A8MW95 431 aa17.21■□□□□ 0.35
PABPC1-221ENST00000522720 M0QYV0 167 aa17.21■□□□□ 0.35
PABPC1-221ENST00000522720 SCAMP3O14828 347 aaKnown RBP17.21■□□□□ 0.35
PABPC1-221ENST00000522720 GABBR2O75899 941 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms