RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 PPEF2O14830 753 aa8.15□□□□□ -1.1
HMBOX1-208ENST00000521516 TRIM24O15164 1050 aa8.15□□□□□ -1.1
HMBOX1-208ENST00000521516 PRPF40AO75400 957 aaKnown RBP8.15□□□□□ -1.1
HMBOX1-208ENST00000521516 ABCB4P21439 1286 aa8.15□□□□□ -1.1
HMBOX1-208ENST00000521516 CD27P26842 260 aa8.15□□□□□ -1.1
HMBOX1-208ENST00000521516 ZNF132P52740 706 aa8.15□□□□□ -1.1
HMBOX1-208ENST00000521516 RPL10AP62906 217 aaKnown RBP8.15□□□□□ -1.1
HMBOX1-208ENST00000521516 HDAC1Q13547 482 aaPredicted RBP8.15□□□□□ -1.1
HMBOX1-208ENST00000521516 SKIDA1Q1XH10 827 aa8.15□□□□□ -1.1
HMBOX1-208ENST00000521516 PROX2Q3B8N5 592 aa8.15□□□□□ -1.1
HMBOX1-208ENST00000521516 BTBD8Q5XKL5 378 aa8.15□□□□□ -1.1
HMBOX1-208ENST00000521516 DCP1BQ8IZD4 617 aaKnown RBP8.15□□□□□ -1.1
HMBOX1-208ENST00000521516 NAT16Q8N8M0 369 aa8.15□□□□□ -1.1
HMBOX1-208ENST00000521516 LEO1Q8WVC0 666 aaPredicted RBP8.15□□□□□ -1.1
HMBOX1-208ENST00000521516 SNX19Q92543 992 aa8.15□□□□□ -1.1
HMBOX1-208ENST00000521516 OTUB2Q96DC9 234 aa8.15□□□□□ -1.1
HMBOX1-208ENST00000521516 SLC46A1Q96NT5 459 aa8.15□□□□□ -1.1
HMBOX1-208ENST00000521516 DUSP9Q99956 384 aaKnown RBP8.15□□□□□ -1.1
HMBOX1-208ENST00000521516 PLEKHA5Q9HAU0 1116 aa8.15□□□□□ -1.1
HMBOX1-208ENST00000521516 ABCB6Q9NP58 842 aa8.15□□□□□ -1.1
HMBOX1-208ENST00000521516 TBC1D14Q9P2M4 693 aa8.15□□□□□ -1.1
HMBOX1-208ENST00000521516 UBQLN1Q9UMX0 589 aaKnown RBP8.15□□□□□ -1.1
HMBOX1-208ENST00000521516 ABCA2Q9BZC7 2435 aa8.15□□□□□ -1.11
HMBOX1-208ENST00000521516 A0A087WWV3 80 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 CCDC196A0A1B0GTZ2 297 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 CDRT15L2A8MXV6 281 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 PRRT4C9JH25 899 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 SGSM2O43147 1006 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 TSPAN3O60637 253 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 C7P10643 843 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 GCFC2P16383 781 aaKnown RBP8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 EPHA8P29322 1005 aaPredicted RBP8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 EXOSC10Q01780 885 aaKnown RBP8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 NCAPHQ15003 741 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 DDR2Q16832 855 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 ZNF787Q6DD87 383 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 USP53Q70EK8 1073 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 KRI1Q8N9T8 703 aaKnown RBP8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 DEPDC7Q96QD5 511 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 RPF1Q9H9Y2 349 aaKnown RBP8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 TMPRSS4Q9NRS4 437 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 RCAN3Q9UKA8 241 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 AKAP9Q99996 3911 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 KLF18A0A0U1RQI7 1052 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 A0A1B0GTL3 188 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 A0A1W2PNU3 283 aaPredicted RBP8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 TTC26A0AVF1 554 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 WASH3PC4AMC7 463 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 K7ERI5 159 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 SCAMP3O14828 347 aaKnown RBP8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 CYP11B2P19099 503 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 GRNP28799 593 aaKnown RBP8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 GRIK1P39086 918 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 CD97P48960 835 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 DUSP3P51452 185 aaPredicted RBP8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 FOSBP53539 338 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 NLRP5P59047 1200 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 NPY5RQ15761 445 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 NFE2Q16621 373 aaPredicted RBP8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 TBR1Q16650 682 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 ZSCAN23Q3MJ62 389 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 PRAMEF14Q5SWL7 426 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 GRAMD4Q6IC98 578 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 MPZL3Q6UWV2 235 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 CLEC14AQ86T13 490 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 TMPRSS6Q8IU80 811 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 THEM5Q8N1Q8 247 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 SIPA1Q96FS4 1042 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 PRR11Q96HE9 360 aaPredicted RBP8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 MRPL4Q9BYD3 311 aaKnown RBP8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 RNF38Q9H0F5 515 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 CFAP97Q9P2B7 532 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 CPQQ9Y646 472 aa8.14□□□□□ -1.11
HMBOX1-208ENST00000521516 CHMLP26374 656 aa8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 GUCY2FP51841 1108 aa8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 ENPP2Q13822 863 aa8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 STARD3Q14849 445 aa8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 DDX42Q86XP3 938 aaKnown RBP eCLIP8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 SLFN12Q8IYM2 578 aa8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 BLIDQ8IZY5 108 aa8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 BIRC7Q96CA5 298 aa8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 TARS2Q9BW92 718 aaKnown RBP8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 ACE2Q9BYF1 805 aaPredicted RBP8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 PCDHGA8Q9Y5G5 932 aa8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 STON1Q9Y6Q2 735 aa8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 SLC27A2O14975 620 aa8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 CSO75390 466 aaKnown RBP8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 GJB6O95452 261 aa8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 RBMS1P29558 406 aaKnown RBP8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 DCTP40126 519 aa8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 C21orf59P57076 290 aa8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 HNRNPUQ00839 825 aaKnown RBP eCLIP8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 SPAG1Q07617 926 aa8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 TAS1R3Q7RTX0 852 aa8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 ADAT2Q7Z6V5 191 aaKnown RBP8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 METTL23Q86XA0 190 aa8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 SCFD1Q8WVM8 642 aa8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 PRCCQ92733 491 aaPredicted RBP8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 MIB2Q96AX9 1013 aa8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 POM121Q96HA1 1249 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms