RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 ADAMTS18Q8TE60 1221 aa5.14□□□□□ -1.59
CLK4-207ENST00000520909 FAM167AQ96KS9 214 aa5.14□□□□□ -1.59
CLK4-207ENST00000520909 LMBRD1Q9NUN5 540 aa5.14□□□□□ -1.59
CLK4-207ENST00000520909 PI4KBQ9UBF8 816 aa5.14□□□□□ -1.59
CLK4-207ENST00000520909 GABRQQ9UN88 632 aa5.14□□□□□ -1.59
CLK4-207ENST00000520909 C3P01024 1663 aa5.13□□□□□ -1.59
CLK4-207ENST00000520909 ADAMTSL3P82987 1691 aa5.13□□□□□ -1.59
CLK4-207ENST00000520909 RIMS1Q86UR5 1692 aaKnown RBP5.13□□□□□ -1.59
CLK4-207ENST00000520909 NEXMIFQ5QGS0 1516 aa5.13□□□□□ -1.59
CLK4-207ENST00000520909 NRXN1Q9ULB1 1477 aa5.13□□□□□ -1.59
CLK4-207ENST00000520909 PIK3C2GO75747 1445 aa5.13□□□□□ -1.59
CLK4-207ENST00000520909 CD8B2A6NJW9 211 aa5.13□□□□□ -1.59
CLK4-207ENST00000520909 ERC2O15083 957 aa5.13□□□□□ -1.59
CLK4-207ENST00000520909 FTLP02792 175 aaPredicted RBP5.13□□□□□ -1.59
CLK4-207ENST00000520909 TYRP14679 529 aa5.13□□□□□ -1.59
CLK4-207ENST00000520909 PDCP20941 246 aa5.13□□□□□ -1.59
CLK4-207ENST00000520909 EXOSC9Q06265 439 aaKnown RBP5.13□□□□□ -1.59
CLK4-207ENST00000520909 ITKQ08881 620 aa5.13□□□□□ -1.59
CLK4-207ENST00000520909 FAM187BQ17R55 369 aa5.13□□□□□ -1.59
CLK4-207ENST00000520909 SOCS4Q8WXH5 440 aa5.13□□□□□ -1.59
CLK4-207ENST00000520909 FYTTD1Q96QD9 318 aaKnown RBP5.13□□□□□ -1.59
CLK4-207ENST00000520909 EFHD1Q9BUP0 239 aa5.13□□□□□ -1.59
CLK4-207ENST00000520909 FOXP1Q9H334 677 aaPredicted RBP5.13□□□□□ -1.59
CLK4-207ENST00000520909 PNPOQ9NVS9 261 aa5.13□□□□□ -1.59
CLK4-207ENST00000520909 SHOC2Q9UQ13 582 aa5.13□□□□□ -1.59
CLK4-207ENST00000520909 PTPRMP28827 1452 aa5.12□□□□□ -1.59
CLK4-207ENST00000520909 CCDC7Q96M83 1385 aa5.12□□□□□ -1.59
CLK4-207ENST00000520909 TCRBV5S1A1TA0A578 114 aa5.12□□□□□ -1.59
CLK4-207ENST00000520909 TMEM232C9JQI7 657 aa5.12□□□□□ -1.59
CLK4-207ENST00000520909 GABRDO14764 452 aa5.12□□□□□ -1.59
CLK4-207ENST00000520909 DTNBO60941 627 aa5.12□□□□□ -1.59
CLK4-207ENST00000520909 ABLIM3O94929 683 aa5.12□□□□□ -1.59
CLK4-207ENST00000520909 ALPLP05186 524 aa5.12□□□□□ -1.59
CLK4-207ENST00000520909 TRIM71Q2Q1W2 868 aaKnown RBP5.12□□□□□ -1.59
CLK4-207ENST00000520909 CCDC17Q96LX7 622 aa5.12□□□□□ -1.59
CLK4-207ENST00000520909 TESK2Q96S53 571 aa5.12□□□□□ -1.59
CLK4-207ENST00000520909 CCDC8Q9H0W5 538 aaPredicted RBP5.12□□□□□ -1.59
CLK4-207ENST00000520909 POT1Q9NUX5 634 aa5.12□□□□□ -1.59
CLK4-207ENST00000520909 ATP8A1Q9Y2Q0 1164 aa5.12□□□□□ -1.59
CLK4-207ENST00000520909 PLEKHM1Q9Y4G2 1056 aa5.12□□□□□ -1.59
CLK4-207ENST00000520909 TRPM1Q7Z4N2 1603 aa5.12□□□□□ -1.59
CLK4-207ENST00000520909 SCAF11Q99590 1463 aaKnown RBP5.12□□□□□ -1.59
CLK4-207ENST00000520909 PPLO60437 1756 aa5.11□□□□□ -1.59
CLK4-207ENST00000520909 EIF3AQ14152 1382 aaKnown RBP5.11□□□□□ -1.59
CLK4-207ENST00000520909 KIF7Q2M1P5 1343 aa5.11□□□□□ -1.59
CLK4-207ENST00000520909 ADAM10O14672 748 aa5.11□□□□□ -1.59
CLK4-207ENST00000520909 GCATO75600 419 aa5.11□□□□□ -1.59
CLK4-207ENST00000520909 MYCLP12524 364 aaPredicted RBP5.11□□□□□ -1.59
CLK4-207ENST00000520909 CCND1P24385 295 aa5.11□□□□□ -1.59
CLK4-207ENST00000520909 THBS3P49746 956 aa5.11□□□□□ -1.59
CLK4-207ENST00000520909 PDE6CP51160 858 aa5.11□□□□□ -1.59
CLK4-207ENST00000520909 GUCY2FP51841 1108 aa5.11□□□□□ -1.59
CLK4-207ENST00000520909 TMF1P82094 1093 aa5.11□□□□□ -1.59
CLK4-207ENST00000520909 ODF1Q14990 250 aa5.11□□□□□ -1.59
CLK4-207ENST00000520909 DEPDC1Q5TB30 811 aa5.11□□□□□ -1.59
CLK4-207ENST00000520909 SLC15A3Q8IY34 581 aa5.11□□□□□ -1.59
CLK4-207ENST00000520909 BRIX1Q8TDN6 353 aaKnown RBP5.11□□□□□ -1.59
CLK4-207ENST00000520909 OSCP1Q8WVF1 389 aa5.11□□□□□ -1.59
CLK4-207ENST00000520909 LYZL4Q96KX0 146 aa5.11□□□□□ -1.59
CLK4-207ENST00000520909 MYO5BQ9ULV0 1848 aa5.11□□□□□ -1.59
CLK4-207ENST00000520909 IFT172Q9UG01 1749 aa5.11□□□□□ -1.59
CLK4-207ENST00000520909 PLEKHG1Q9ULL1 1385 aa5.1□□□□□ -1.59
CLK4-207ENST00000520909 CENPJQ9HC77 1338 aaPredicted RBP5.1□□□□□ -1.59
CLK4-207ENST00000520909 BTBD19C9JJ37 291 aa5.1□□□□□ -1.59
CLK4-207ENST00000520909 hCG_1984214I3L0E3 225 aa5.1□□□□□ -1.59
CLK4-207ENST00000520909 AP4M1O00189 453 aa5.1□□□□□ -1.59
CLK4-207ENST00000520909 UNC5CO95185 931 aa5.1□□□□□ -1.59
CLK4-207ENST00000520909 GRPP07492 148 aa5.1□□□□□ -1.59
CLK4-207ENST00000520909 HDCP19113 662 aa5.1□□□□□ -1.59
CLK4-207ENST00000520909 HOXD9P28356 352 aaPredicted RBP5.1□□□□□ -1.59
CLK4-207ENST00000520909 LRPAP1P30533 357 aa5.1□□□□□ -1.59
CLK4-207ENST00000520909 VIPR2P41587 438 aa5.1□□□□□ -1.59
CLK4-207ENST00000520909 MTMR1Q13613 665 aa5.1□□□□□ -1.59
CLK4-207ENST00000520909 RNASE12Q5GAN4 147 aaKnown RBP5.1□□□□□ -1.59
CLK4-207ENST00000520909 EMC10Q5UCC4 262 aa5.1□□□□□ -1.59
CLK4-207ENST00000520909 CAND1Q86VP6 1230 aaKnown RBP5.1□□□□□ -1.59
CLK4-207ENST00000520909 ACRBPQ8NEB7 543 aa5.1□□□□□ -1.59
CLK4-207ENST00000520909 MTMR8Q96EF0 704 aa5.1□□□□□ -1.59
CLK4-207ENST00000520909 PRAM1Q96QH2 718 aa5.1□□□□□ -1.59
CLK4-207ENST00000520909 MRPS17Q9Y2R5 130 aaKnown RBP5.1□□□□□ -1.59
CLK4-207ENST00000520909 METP08581 1390 aa5.09□□□□□ -1.59
CLK4-207ENST00000520909 UBR1Q8IWV7 1749 aa5.09□□□□□ -1.59
CLK4-207ENST00000520909 KIAA1210Q9ULL0 1709 aa5.09□□□□□ -1.59
CLK4-207ENST00000520909 ARHGAP23Q9P227 1491 aa5.09□□□□□ -1.59
CLK4-207ENST00000520909 H3BNX3 289 aa5.09□□□□□ -1.59
CLK4-207ENST00000520909 H3BUI4 141 aa5.09□□□□□ -1.59
CLK4-207ENST00000520909 FPR3P25089 353 aa5.09□□□□□ -1.59
CLK4-207ENST00000520909 MAP2K6P52564 334 aa5.09□□□□□ -1.59
CLK4-207ENST00000520909 SOX8P57073 446 aa5.09□□□□□ -1.59
CLK4-207ENST00000520909 E2F1Q01094 437 aa5.09□□□□□ -1.59
CLK4-207ENST00000520909 PTPN21Q16825 1174 aa5.09□□□□□ -1.59
CLK4-207ENST00000520909 LEXMQ3ZCV2 418 aa5.09□□□□□ -1.59
CLK4-207ENST00000520909 C4orf46Q504U0 113 aa5.09□□□□□ -1.59
CLK4-207ENST00000520909 CCDC157Q569K6 752 aa5.09□□□□□ -1.59
CLK4-207ENST00000520909 BCDIN3DQ7Z5W3 292 aaKnown RBP5.09□□□□□ -1.59
CLK4-207ENST00000520909 PRR18Q8N4B5 295 aa5.09□□□□□ -1.59
CLK4-207ENST00000520909 SIRT6Q8N6T7 355 aa5.09□□□□□ -1.59
CLK4-207ENST00000520909 ZNF398Q8TD17 642 aa5.09□□□□□ -1.59
CLK4-207ENST00000520909 SIGLEC11Q96RL6 698 aa5.09□□□□□ -1.59
CLK4-207ENST00000520909 SLC13A1Q9BZW2 595 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms