RNA–Protein interactions for RNA: ENST00000520802.5

EFCAB13-209, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 568 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-209ENST00000520802 FAM35AQ86V20 835 aa18.63■□□□□ 0.57
EFCAB13-209ENST00000520802 BBS7Q8IWZ6 715 aa18.63■□□□□ 0.57
EFCAB13-209ENST00000520802 DEFB119Q8N690 84 aa18.63■□□□□ 0.57
EFCAB13-209ENST00000520802 LINC00301Q8NCQ3 95 aa18.63■□□□□ 0.57
EFCAB13-209ENST00000520802 SCAMP5Q8TAC9 235 aa18.63■□□□□ 0.57
EFCAB13-209ENST00000520802 CEP76Q8TAP6 659 aa18.63■□□□□ 0.57
EFCAB13-209ENST00000520802 ZNF516Q92618 1163 aa18.63■□□□□ 0.57
EFCAB13-209ENST00000520802 SMARCD1Q96GM5 515 aa18.63■□□□□ 0.57
EFCAB13-209ENST00000520802 ZNF396Q96N95 335 aaPredicted RBP18.63■□□□□ 0.57
EFCAB13-209ENST00000520802 SMYD3Q9H7B4 428 aa18.63■□□□□ 0.57
EFCAB13-209ENST00000520802 CCSER2Q9H7U1 834 aa18.63■□□□□ 0.57
EFCAB13-209ENST00000520802 GMIPQ9P107 970 aa18.63■□□□□ 0.57
EFCAB13-209ENST00000520802 CGNQ9P2M7 1197 aaKnown RBP18.63■□□□□ 0.57
EFCAB13-209ENST00000520802 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.62■□□□□ 0.57
EFCAB13-209ENST00000520802 HOXC11O43248 304 aaPredicted RBP18.62■□□□□ 0.57
EFCAB13-209ENST00000520802 STX6O43752 255 aa18.62■□□□□ 0.57
EFCAB13-209ENST00000520802 AP1G2O75843 785 aa18.62■□□□□ 0.57
EFCAB13-209ENST00000520802 TOP3BO95985 862 aaKnown RBP18.62■□□□□ 0.57
EFCAB13-209ENST00000520802 HOXB2P14652 356 aa18.62■□□□□ 0.57
EFCAB13-209ENST00000520802 ITPKAP23677 461 aa18.62■□□□□ 0.57
EFCAB13-209ENST00000520802 HOXD12P35452 270 aa18.62■□□□□ 0.57
EFCAB13-209ENST00000520802 WASP42768 502 aa18.62■□□□□ 0.57
EFCAB13-209ENST00000520802 TUBP50607 506 aa18.62■□□□□ 0.57
EFCAB13-209ENST00000520802 GFPT1Q06210 699 aaPredicted RBP18.62■□□□□ 0.57
EFCAB13-209ENST00000520802 E2F4Q16254 413 aa18.62■□□□□ 0.57
EFCAB13-209ENST00000520802 DUOXA1Q1HG43 343 aa18.62■□□□□ 0.57
EFCAB13-209ENST00000520802 SLC23A3Q6PIS1 610 aa18.62■□□□□ 0.57
EFCAB13-209ENST00000520802 SCARA5Q6ZMJ2 495 aa18.62■□□□□ 0.57
EFCAB13-209ENST00000520802 KDF1Q8NAX2 398 aaPredicted RBP18.62■□□□□ 0.57
EFCAB13-209ENST00000520802 SCFD1Q8WVM8 642 aa18.62■□□□□ 0.57
EFCAB13-209ENST00000520802 C7orf25Q9BPX7 421 aa18.62■□□□□ 0.57
EFCAB13-209ENST00000520802 COMMD8Q9NX08 183 aa18.62■□□□□ 0.57
EFCAB13-209ENST00000520802 TFIP11Q9UBB9 837 aaKnown RBP18.62■□□□□ 0.57
EFCAB13-209ENST00000520802 PILRBQ9UKJ0 227 aa18.62■□□□□ 0.57
EFCAB13-209ENST00000520802 SLC6A14Q9UN76 642 aa18.62■□□□□ 0.57
EFCAB13-209ENST00000520802 PPP6R2O75170 966 aa18.61■□□□□ 0.57
EFCAB13-209ENST00000520802 P4HA1P13674 534 aa18.61■□□□□ 0.57
EFCAB13-209ENST00000520802 TRIM21P19474 475 aaKnown RBP18.61■□□□□ 0.57
EFCAB13-209ENST00000520802 NTSR1P30989 418 aa18.61■□□□□ 0.57
EFCAB13-209ENST00000520802 AP3M2P53677 418 aa18.61■□□□□ 0.57
EFCAB13-209ENST00000520802 GOLGA8FQ08AF8 430 aa18.61■□□□□ 0.57
EFCAB13-209ENST00000520802 GOLGA8DPQ0D2H9 430 aa18.61■□□□□ 0.57
EFCAB13-209ENST00000520802 SNX30Q5VWJ9 437 aa18.61■□□□□ 0.57
EFCAB13-209ENST00000520802 GRAMD4Q6IC98 578 aa18.61■□□□□ 0.57
EFCAB13-209ENST00000520802 UNC13DQ70J99 1090 aa18.61■□□□□ 0.57
EFCAB13-209ENST00000520802 RABEPKQ7Z6M1 372 aa18.61■□□□□ 0.57
EFCAB13-209ENST00000520802 TMEM25Q86YD3 366 aa18.61■□□□□ 0.57
EFCAB13-209ENST00000520802 ETFBKMTQ8IXQ9 262 aa18.61■□□□□ 0.57
EFCAB13-209ENST00000520802 PHTF2Q8N3S3 785 aa18.61■□□□□ 0.57
EFCAB13-209ENST00000520802 TERB1Q8NA31 727 aa18.61■□□□□ 0.57
EFCAB13-209ENST00000520802 INTS4Q96HW7 963 aaKnown RBP18.61■□□□□ 0.57
EFCAB13-209ENST00000520802 ZFRQ96KR1 1074 aaKnown RBP18.61■□□□□ 0.57
EFCAB13-209ENST00000520802 XPO6Q96QU8 1125 aaKnown RBP18.61■□□□□ 0.57
EFCAB13-209ENST00000520802 XYLT2Q9H1B5 865 aa18.61■□□□□ 0.57
EFCAB13-209ENST00000520802 FBXO44Q9H4M3 255 aa18.61■□□□□ 0.57
EFCAB13-209ENST00000520802 MAGEF1Q9HAY2 307 aa18.61■□□□□ 0.57
EFCAB13-209ENST00000520802 SLC39A2Q9NP94 309 aa18.61■□□□□ 0.57
EFCAB13-209ENST00000520802 KRT82Q9NSB4 513 aa18.61■□□□□ 0.57
EFCAB13-209ENST00000520802 DNAJC17Q9NVM6 304 aaKnown RBP18.61■□□□□ 0.57
EFCAB13-209ENST00000520802 USP24Q9UPU5 2620 aa18.6■□□□□ 0.57
EFCAB13-209ENST00000520802 CUTAO60888 179 aa18.6■□□□□ 0.57
EFCAB13-209ENST00000520802 GABRG2P18507 467 aa18.6■□□□□ 0.57
EFCAB13-209ENST00000520802 CASP4P49662 377 aa18.6■□□□□ 0.57
EFCAB13-209ENST00000520802 SIM1P81133 766 aaPredicted RBP18.6■□□□□ 0.57
EFCAB13-209ENST00000520802 NCOA4Q13772 614 aa18.6■□□□□ 0.57
EFCAB13-209ENST00000520802 KNOP1Q1ED39 458 aaKnown RBP18.6■□□□□ 0.57
EFCAB13-209ENST00000520802 CNNM4Q6P4Q7 775 aa18.6■□□□□ 0.57
EFCAB13-209ENST00000520802 ACOT1Q86TX2 421 aa18.6■□□□□ 0.57
EFCAB13-209ENST00000520802 CHPFQ8IZ52 775 aa18.6■□□□□ 0.57
EFCAB13-209ENST00000520802 GOLGA5Q8TBA6 731 aa18.6■□□□□ 0.57
EFCAB13-209ENST00000520802 BLZF1Q9H2G9 400 aa18.6■□□□□ 0.57
EFCAB13-209ENST00000520802 TLR8Q9NR97 1041 aaKnown RBP18.6■□□□□ 0.57
EFCAB13-209ENST00000520802 CALCOCO1Q9P1Z2 691 aa18.6■□□□□ 0.57
EFCAB13-209ENST00000520802 LSM7Q9UK45 103 aaKnown RBP18.6■□□□□ 0.57
EFCAB13-209ENST00000520802 WASF3Q9UPY6 502 aa18.6■□□□□ 0.57
EFCAB13-209ENST00000520802 ZFHX4Q86UP3 3567 aa18.6■□□□□ 0.57
EFCAB13-209ENST00000520802 MYOFQ9NZM1 2061 aa18.59■□□□□ 0.57
EFCAB13-209ENST00000520802 LAMA1P25391 3075 aa18.59■□□□□ 0.57
EFCAB13-209ENST00000520802 SPAARA0A1B0GVQ0 90 aa18.59■□□□□ 0.57
EFCAB13-209ENST00000520802 NEDD8-MDP1E9PL57 170 aa18.59■□□□□ 0.57
EFCAB13-209ENST00000520802 POLR2DO15514 142 aaKnown RBP18.59■□□□□ 0.57
EFCAB13-209ENST00000520802 HYAL3O43820 417 aaPredicted RBP18.59■□□□□ 0.57
EFCAB13-209ENST00000520802 TLR5O60602 858 aa18.59■□□□□ 0.57
EFCAB13-209ENST00000520802 OPHN1O60890 802 aa18.59■□□□□ 0.57
EFCAB13-209ENST00000520802 ZNF217O75362 1048 aa18.59■□□□□ 0.57
EFCAB13-209ENST00000520802 CHRM1P11229 460 aaPredicted RBP18.59■□□□□ 0.57
EFCAB13-209ENST00000520802 ZNF33AQ06730 810 aa18.59■□□□□ 0.57
EFCAB13-209ENST00000520802 C12orf56Q8IXR9 622 aa18.59■□□□□ 0.57
EFCAB13-209ENST00000520802 ZCCHC14Q8WYQ9 949 aaKnown RBP18.59■□□□□ 0.57
EFCAB13-209ENST00000520802 ERLEC1Q96DZ1 483 aa18.59■□□□□ 0.57
EFCAB13-209ENST00000520802 BBS2Q9BXC9 721 aa18.59■□□□□ 0.57
EFCAB13-209ENST00000520802 VRTNQ9H8Y1 702 aa18.59■□□□□ 0.57
EFCAB13-209ENST00000520802 FSCN3Q9NQT6 498 aa18.59■□□□□ 0.57
EFCAB13-209ENST00000520802 WDR35Q9P2L0 1181 aa18.59■□□□□ 0.57
EFCAB13-209ENST00000520802 NDUFS2O75306 463 aa18.58■□□□□ 0.56
EFCAB13-209ENST00000520802 CENPBP07199 599 aaPredicted RBP18.58■□□□□ 0.56
EFCAB13-209ENST00000520802 SERPINF2P08697 491 aa18.58■□□□□ 0.56
EFCAB13-209ENST00000520802 CASP1P29466 404 aa18.58■□□□□ 0.56
EFCAB13-209ENST00000520802 ATP5C1P36542 298 aaKnown RBP18.58■□□□□ 0.56
EFCAB13-209ENST00000520802 MAP3K7CLP57077 242 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms