RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 PAWRQ96IZ0 340 aaKnown RBP24.42■■□□□ 1.5
SLIT3-204ENST00000518140 TBCBQ99426 244 aa24.42■■□□□ 1.5
SLIT3-204ENST00000518140 RAB17Q9H0T7 212 aa24.42■■□□□ 1.5
SLIT3-204ENST00000518140 CSNK1G1Q9HCP0 422 aa24.42■■□□□ 1.5
SLIT3-204ENST00000518140 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.42■■□□□ 1.5
SLIT3-204ENST00000518140 KIAA0100Q14667 2235 aaKnown RBP24.42■■□□□ 1.5
SLIT3-204ENST00000518140 NT5C1B-RDH14C9J2C7 533 aa24.41■■□□□ 1.5
SLIT3-204ENST00000518140 USP17L7P0C7H9 530 aa24.41■■□□□ 1.5
SLIT3-204ENST00000518140 HSPA8P11142 646 aaKnown RBP24.41■■□□□ 1.5
SLIT3-204ENST00000518140 RPL21P46778 160 aaKnown RBP24.41■■□□□ 1.5
SLIT3-204ENST00000518140 SLC11A1P49279 550 aa24.41■■□□□ 1.5
SLIT3-204ENST00000518140 CA9Q16790 459 aa24.41■■□□□ 1.5
SLIT3-204ENST00000518140 RAB41Q5JT25 222 aa24.41■■□□□ 1.5
SLIT3-204ENST00000518140 C1orf53Q5VUE5 145 aa24.41■■□□□ 1.5
SLIT3-204ENST00000518140 ARCQ7LC44 396 aa24.41■■□□□ 1.5
SLIT3-204ENST00000518140 CAVIN3Q969G5 261 aa24.41■■□□□ 1.5
SLIT3-204ENST00000518140 GPR62Q9BZJ7 368 aa24.41■■□□□ 1.5
SLIT3-204ENST00000518140 ACBD3Q9H3P7 528 aa24.41■■□□□ 1.5
SLIT3-204ENST00000518140 TMEM39AQ9NV64 488 aa24.41■■□□□ 1.5
SLIT3-204ENST00000518140 VPS18Q9P253 973 aa24.41■■□□□ 1.5
SLIT3-204ENST00000518140 YJEFN3A6XGL0 299 aa24.41■■□□□ 1.5
SLIT3-204ENST00000518140 TBKBP1A7MCY6 615 aa24.41■■□□□ 1.5
SLIT3-204ENST00000518140 E7ENQ6 273 aa24.41■■□□□ 1.5
SLIT3-204ENST00000518140 UPP2O95045 317 aa24.41■■□□□ 1.5
SLIT3-204ENST00000518140 ARSEP51690 589 aa24.41■■□□□ 1.5
SLIT3-204ENST00000518140 YWHAZP63104 245 aaKnown RBP24.41■■□□□ 1.5
SLIT3-204ENST00000518140 SYPL2Q5VXT5 272 aa24.41■■□□□ 1.5
SLIT3-204ENST00000518140 ARMC5Q96C12 935 aa24.41■■□□□ 1.5
SLIT3-204ENST00000518140 CALN1Q9BXU9 219 aa24.41■■□□□ 1.5
SLIT3-204ENST00000518140 DNPEPQ9ULA0 475 aa24.41■■□□□ 1.5
SLIT3-204ENST00000518140 ECEL1O95672 775 aa24.4■■□□□ 1.5
SLIT3-204ENST00000518140 FYNP06241 537 aa24.4■■□□□ 1.5
SLIT3-204ENST00000518140 MATKP42679 507 aa24.4■■□□□ 1.5
SLIT3-204ENST00000518140 GJA8P48165 433 aa24.4■■□□□ 1.5
SLIT3-204ENST00000518140 CDH6P55285 790 aa24.4■■□□□ 1.5
SLIT3-204ENST00000518140 C1QTNF8P60827 252 aa24.4■■□□□ 1.5
SLIT3-204ENST00000518140 TRIP13Q15645 432 aaPredicted RBP24.4■■□□□ 1.5
SLIT3-204ENST00000518140 LRRC26Q2I0M4 334 aa24.4■■□□□ 1.5
SLIT3-204ENST00000518140 DCAF6Q58WW2 860 aa24.4■■□□□ 1.5
SLIT3-204ENST00000518140 PRUNE1Q86TP1 453 aa24.4■■□□□ 1.5
SLIT3-204ENST00000518140 NPAS4Q8IUM7 802 aa24.4■■□□□ 1.5
SLIT3-204ENST00000518140 MARCH5Q9NX47 278 aa24.4■■□□□ 1.5
SLIT3-204ENST00000518140 GRHL1Q9NZI5 618 aa24.4■■□□□ 1.5
SLIT3-204ENST00000518140 HPCAL4Q9UM19 191 aa24.4■■□□□ 1.5
SLIT3-204ENST00000518140 CST8O60676 142 aa24.39■■□□□ 1.5
SLIT3-204ENST00000518140 HSF2BPO75031 334 aa24.39■■□□□ 1.5
SLIT3-204ENST00000518140 ENDOD1O94919 500 aa24.39■■□□□ 1.5
SLIT3-204ENST00000518140 OAZ2O95190 189 aa24.39■■□□□ 1.5
SLIT3-204ENST00000518140 ALDH2P05091 517 aa24.39■■□□□ 1.5
SLIT3-204ENST00000518140 ITGB8P26012 769 aa24.39■■□□□ 1.5
SLIT3-204ENST00000518140 TSPY1Q01534 308 aa24.39■■□□□ 1.5
SLIT3-204ENST00000518140 OTUD1Q5VV17 481 aaPredicted RBP24.39■■□□□ 1.5
SLIT3-204ENST00000518140 TMEM173Q86WV6 379 aaPredicted RBP24.39■■□□□ 1.5
SLIT3-204ENST00000518140 CEP57Q86XR8 500 aa24.39■■□□□ 1.5
SLIT3-204ENST00000518140 ATL2Q8NHH9 583 aa24.39■■□□□ 1.5
SLIT3-204ENST00000518140 FAM71BQ8TC56 605 aa24.39■■□□□ 1.5
SLIT3-204ENST00000518140 SLCO2A1Q92959 643 aa24.39■■□□□ 1.5
SLIT3-204ENST00000518140 VIPAS39Q9H9C1 493 aa24.39■■□□□ 1.5
SLIT3-204ENST00000518140 FAM114A2Q9NRY5 505 aa24.39■■□□□ 1.5
SLIT3-204ENST00000518140 RASAL2Q9UJF2 1139 aa24.39■■□□□ 1.5
SLIT3-204ENST00000518140 ADAM28Q9UKQ2 775 aa24.39■■□□□ 1.5
SLIT3-204ENST00000518140 LIASO43766 372 aa24.39■■□□□ 1.49
SLIT3-204ENST00000518140 CYP2F1P24903 491 aa24.39■■□□□ 1.49
SLIT3-204ENST00000518140 LMAN1P49257 510 aa24.39■■□□□ 1.49
SLIT3-204ENST00000518140 LBX1P52954 281 aa24.39■■□□□ 1.49
SLIT3-204ENST00000518140 DAOAP59103 153 aa24.39■■□□□ 1.49
SLIT3-204ENST00000518140 KRT17Q04695 432 aa24.39■■□□□ 1.49
SLIT3-204ENST00000518140 ZDHHC24Q6UX98 284 aa24.39■■□□□ 1.49
SLIT3-204ENST00000518140 EIF1ADQ8N9N8 165 aaKnown RBP24.39■■□□□ 1.49
SLIT3-204ENST00000518140 CCDC114Q96M63 670 aa24.39■■□□□ 1.49
SLIT3-204ENST00000518140 SNRNP25Q9BV90 132 aaKnown RBP24.39■■□□□ 1.49
SLIT3-204ENST00000518140 ZDHHC18Q9NUE0 388 aa24.39■■□□□ 1.49
SLIT3-204ENST00000518140 NAALADL1Q9UQQ1 740 aa24.39■■□□□ 1.49
SLIT3-204ENST00000518140 CAPN15O75808 1086 aa24.38■■□□□ 1.49
SLIT3-204ENST00000518140 IL4RP24394 825 aa24.38■■□□□ 1.49
SLIT3-204ENST00000518140 DPYSL3Q14195 570 aa24.38■■□□□ 1.49
SLIT3-204ENST00000518140 PPP1R7Q15435 360 aa24.38■■□□□ 1.49
SLIT3-204ENST00000518140 SLC39A12Q504Y0 691 aa24.38■■□□□ 1.49
SLIT3-204ENST00000518140 BOLA3Q53S33 107 aa24.38■■□□□ 1.49
SLIT3-204ENST00000518140 VARS2Q5ST30 1063 aaKnown RBP24.38■■□□□ 1.49
SLIT3-204ENST00000518140 FAM171A1Q5VUB5 890 aa24.38■■□□□ 1.49
SLIT3-204ENST00000518140 BHLHA9Q7RTU4 235 aa24.38■■□□□ 1.49
SLIT3-204ENST00000518140 RUNDC3BQ96NL0 473 aa24.38■■□□□ 1.49
SLIT3-204ENST00000518140 HOMER3Q9NSC5 361 aa24.38■■□□□ 1.49
SLIT3-204ENST00000518140 FAN1Q9Y2M0 1017 aa24.38■■□□□ 1.49
SLIT3-204ENST00000518140 NEU2Q9Y3R4 380 aa24.38■■□□□ 1.49
SLIT3-204ENST00000518140 ARHGEF37A1IGU5 675 aa24.38■■□□□ 1.49
SLIT3-204ENST00000518140 DRG2P55039 364 aaKnown RBP24.38■■□□□ 1.49
SLIT3-204ENST00000518140 ZSCAN26Q16670 478 aa24.38■■□□□ 1.49
SLIT3-204ENST00000518140 SLC25A52Q3SY17 297 aa24.38■■□□□ 1.49
SLIT3-204ENST00000518140 HSP90B2PQ58FF3 399 aa24.38■■□□□ 1.49
SLIT3-204ENST00000518140 MED4Q9NPJ6 270 aa24.38■■□□□ 1.49
SLIT3-204ENST00000518140 TANC1Q9C0D5 1861 aa24.37■■□□□ 1.49
SLIT3-204ENST00000518140 TRAPPC3O43617 180 aa24.37■■□□□ 1.49
SLIT3-204ENST00000518140 DAB1O75553 588 aa24.37■■□□□ 1.49
SLIT3-204ENST00000518140 GALTP07902 379 aa24.37■■□□□ 1.49
SLIT3-204ENST00000518140 PLTPP55058 493 aa24.37■■□□□ 1.49
SLIT3-204ENST00000518140 BBS12Q6ZW61 710 aa24.37■■□□□ 1.49
SLIT3-204ENST00000518140 RFX6Q8HWS3 928 aa24.37■■□□□ 1.49
SLIT3-204ENST00000518140 CCDC185Q8N715 623 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms