RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 LRPAP1P30533 357 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 POLR2BP30876 1174 aaKnown RBP7.35□□□□□ -1.23
CPS1-210ENST00000518043 ADMP35318 185 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 PRKCIP41743 596 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 PIK3CAP42336 1068 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 GATMP50440 423 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 SCNN1GP51170 649 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 ZNF132P52740 706 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 YARSP54577 528 aaKnown RBP7.35□□□□□ -1.23
CPS1-210ENST00000518043 GCNT1Q02742 428 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 NCBP1Q09161 790 aaKnown RBP7.35□□□□□ -1.23
CPS1-210ENST00000518043 BIRC3Q13489 604 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 DRAP1Q14919 205 aaPredicted RBP7.35□□□□□ -1.23
CPS1-210ENST00000518043 CCDC81Q6ZN84 652 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 APBB1IPQ7Z5R6 666 aaPredicted RBP7.35□□□□□ -1.23
CPS1-210ENST00000518043 USP37Q86T82 979 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 FAM71AQ8IYT1 594 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 OR8K1Q8NGG5 319 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 KIAA1524Q8TCG1 905 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 ATRIPQ8WXE1 791 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 SYN2Q92777 582 aaPredicted RBP7.35□□□□□ -1.23
CPS1-210ENST00000518043 GATA6Q92908 595 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 NT5C1BQ96P26 610 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 DPH2Q9BQC3 489 aaPredicted RBP7.35□□□□□ -1.23
CPS1-210ENST00000518043 ZSWIM1Q9BR11 485 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 STK33Q9BYT3 514 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 RC3H2Q9HBD1 1191 aaKnown RBP7.35□□□□□ -1.23
CPS1-210ENST00000518043 DPP3Q9NY33 737 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 GMIPQ9P107 970 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 NOCTQ9UK39 431 aaKnown RBP7.35□□□□□ -1.23
CPS1-210ENST00000518043 ITGA11Q9UKX5 1188 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 MYO6Q9UM54 1294 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 CNTN6Q9UQ52 1028 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 GIT1Q9Y2X7 761 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 DAAM1Q9Y4D1 1078 aa7.35□□□□□ -1.23
CPS1-210ENST00000518043 MKI67P46013 3256 aaKnown RBP7.34□□□□□ -1.23
CPS1-210ENST00000518043 SLC22A31A6NKX4 558 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 USP27XA6NNY8 438 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 OFD1O75665 1012 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 TIMP1P01033 207 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 FGFR1P11362 822 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 IMPDH2P12268 514 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 CHRNB2P17787 502 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 CYP3A5P20815 502 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 DNAJA1P31689 397 aaKnown RBP7.34□□□□□ -1.23
CPS1-210ENST00000518043 SOX5P35711 763 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 KCNJ6P48051 423 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 EPHB4P54760 987 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 ARID5AQ03989 594 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 DSC1Q08554 894 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 CUL2Q13617 745 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 RAPGEF1Q13905 1077 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 SFMBT2Q5VUG0 894 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 C9orf57Q5W0N0 161 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 FBXW10Q5XX13 1052 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.34□□□□□ -1.23
CPS1-210ENST00000518043 TOGARAM2Q6ZUX3 1019 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 SLC24A5Q71RS6 500 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 C16orf59Q7L2K0 433 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 ZNF571Q7Z3V5 609 aaPredicted RBP7.34□□□□□ -1.23
CPS1-210ENST00000518043 ZAR1Q86SH2 424 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 PALB2Q86YC2 1186 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 SHISA5Q8N114 240 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 FBXL6Q8N531 539 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 MFSD2AQ8NA29 543 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 GIMAP7Q8NHV1 300 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 LNX1Q8TBB1 728 aaPredicted RBP7.34□□□□□ -1.23
CPS1-210ENST00000518043 SLC20A1Q8WUM9 679 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 DDX1Q92499 740 aaKnown RBP7.34□□□□□ -1.23
CPS1-210ENST00000518043 SEPT8Q92599 483 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 ANKRD36BP1Q96IX9 119 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 TWNKQ96RR1 684 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 TSPAN18Q96SJ8 248 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 BAG1Q99933 345 aaPredicted RBP7.34□□□□□ -1.23
CPS1-210ENST00000518043 PAAF1Q9BRP4 392 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 DESI2Q9BSY9 194 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 TRIM6Q9C030 488 aaPredicted RBP7.34□□□□□ -1.23
CPS1-210ENST00000518043 SMYD3Q9H7B4 428 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 RSAD1Q9HA92 442 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 UBE2TQ9NPD8 197 aaPredicted RBP7.34□□□□□ -1.23
CPS1-210ENST00000518043 ACP6Q9NPH0 428 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 C1orf112Q9NSG2 853 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 TMEM161AQ9NX61 479 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 HMGXB4Q9UGU5 601 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 UBQLN1Q9UMX0 589 aaKnown RBP7.34□□□□□ -1.23
CPS1-210ENST00000518043 PTPRDP23468 1912 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 NLRC5Q86WI3 1866 aa7.34□□□□□ -1.23
CPS1-210ENST00000518043 F8W810 466 aa7.33□□□□□ -1.24
CPS1-210ENST00000518043 ARHGAP6O43182 974 aa7.33□□□□□ -1.24
CPS1-210ENST00000518043 HCRTO43612 131 aa7.33□□□□□ -1.24
CPS1-210ENST00000518043 GFPT2O94808 682 aa7.33□□□□□ -1.24
CPS1-210ENST00000518043 LCA5LO95447 670 aa7.33□□□□□ -1.24
CPS1-210ENST00000518043 PARNO95453 639 aaKnown RBP7.33□□□□□ -1.24
CPS1-210ENST00000518043 CSF2RAP15509 400 aa7.33□□□□□ -1.24
CPS1-210ENST00000518043 ZSCAN20P17040 1043 aaPredicted RBP7.33□□□□□ -1.24
CPS1-210ENST00000518043 RFC2P35250 354 aa7.33□□□□□ -1.24
CPS1-210ENST00000518043 RAP1GAPP47736 663 aa7.33□□□□□ -1.24
CPS1-210ENST00000518043 AARSP49588 968 aaKnown RBP eCLIP7.33□□□□□ -1.24
CPS1-210ENST00000518043 RBP5P82980 135 aa7.33□□□□□ -1.24
CPS1-210ENST00000518043 CETN1Q12798 172 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms