RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 TRDMT1O14717 391 aaKnown RBP11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 XPO1O14980 1071 aaKnown RBP11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 RALAP11233 206 aa11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 GJA4P35212 333 aa11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 BCAT1P54687 386 aa11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 MFAP3P55082 362 aa11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 GOLGA8FQ08AF8 430 aa11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 GOLGA8DPQ0D2H9 430 aa11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 BST2Q10589 180 aaKnown RBP11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 MTAPQ13126 283 aa11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 PPP2R5DQ14738 602 aa11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 CNGA2Q16280 664 aa11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 EXOC3L4Q17RC7 722 aa11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 ZNF528Q3MIS6 628 aa11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 RAB41Q5JT25 222 aa11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 KLHDC10Q6PID8 442 aa11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 LCLAT1Q6UWP7 414 aa11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 RBM43Q6ZSC3 357 aaKnown RBP11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 GPRIN1Q7Z2K8 1008 aa11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 OTUB2Q96DC9 234 aa11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 CRACR2AQ9BSW2 395 aa11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 UBE2TQ9NPD8 197 aaPredicted RBP11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 TSPAN16Q9UKR8 245 aa11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 CNTN6Q9UQ52 1028 aa11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 MIA3Q5JRA6 1907 aa11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 FAM186AA6NE01 2351 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 VPS13AQ96RL7 3174 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 PROB1E7EW31 1015 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 RNF225M0QZC1 329 aaPredicted RBP11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 CYP26A1O43174 497 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 ZBED1O96006 694 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 SP9P0CG40 484 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 SETSIPP0DME0 302 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 RARGP13631 454 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 NBL1P41271 181 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 PLA2G4AP47712 749 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 PGFP49763 221 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 GALK1P51570 392 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 TKTL1P51854 596 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 PDE4CQ08493 712 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 CCINQ13939 588 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 PON2Q15165 354 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 MAN2A1Q16706 1144 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 GOLGA7BQ2TAP0 167 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 TMEM196Q5HYL7 178 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 PM20D1Q6GTS8 502 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 TRIM65Q6PJ69 517 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 ZC3H14Q6PJT7 736 aaKnown RBP11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 SASS6Q6UVJ0 657 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 TTC30AQ86WT1 665 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 ARHGEF19Q8IW93 802 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 MAML2Q8IZL2 1156 aaPredicted RBP11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 SPEM1Q8N4L4 309 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 RBBP8NLQ8NC74 664 aaPredicted RBP11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 CCDC26Q8TAB7 109 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 ENOX1Q8TC92 643 aaKnown RBP11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 KCTD13Q8WZ19 329 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 KAT5Q92993 513 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 ZFRQ96KR1 1074 aaKnown RBP11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 KREMEN1Q96MU8 473 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 P2RY13Q9BPV8 354 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 TUBGCP2Q9BSJ2 902 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 FAM126AQ9BYI3 521 aaPredicted RBP11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 SEMA4AQ9H3S1 761 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 NMUR1Q9HB89 426 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 LRRC4Q9HBW1 653 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 FAM86C1Q9NVL1 165 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 DNMT3LQ9UJW3 386 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 NAGPAQ9UK23 515 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 SH3BP1Q9Y3L3 701 aa11.79□□□□□ -0.52
SCARNA16.1-201ENST00000516133 A0A1W2PQH9 124 aa11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 ATG13O75143 517 aa11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 TBX18O95935 607 aa11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 ADH1CP00326 375 aa11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 KRT5P13647 590 aa11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 DRD1P21728 446 aa11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 EEF1GP26641 437 aaKnown RBP11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 HOXD11P31277 338 aaPredicted RBP11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 CXCL12P48061 93 aa11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 CCR3P51677 355 aa11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 ZNF132P52740 706 aa11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 NRLP54845 237 aa11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 CSTF1Q05048 431 aaKnown RBP11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 FBXO43Q4G163 708 aa11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 VWA3BQ502W6 1294 aa11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 C10orf120Q5SQS8 335 aa11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 HTR3DQ70Z44 454 aa11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 SCD5Q86SK9 330 aa11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 UBA3Q8TBC4 463 aa11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 TFAP2BQ92481 460 aa11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 KLF16Q9BXK1 252 aaPredicted RBP11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 NDST4Q9H3R1 872 aa11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 ANO10Q9NW15 660 aa11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 OSER1Q9NX31 292 aa11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 APEX2Q9UBZ4 518 aa11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.78□□□□□ -0.52
SCARNA16.1-201ENST00000516133 COL4A2P08572 1712 aa11.77□□□□□ -0.52
SCARNA16.1-201ENST00000516133 KCNJ18B7U540 433 aa11.77□□□□□ -0.53
SCARNA16.1-201ENST00000516133 MED7O43513 233 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms