RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 LRP12Q9Y561 859 aa4.78□□□□□ -1.64
LINC01088-211ENST00000515597 CCDC187A0A096LP49 1063 aa4.77□□□□□ -1.65
LINC01088-211ENST00000515597 TMEM232C9JQI7 657 aa4.77□□□□□ -1.65
LINC01088-211ENST00000515597 TSPAN6O43657 245 aa4.77□□□□□ -1.65
LINC01088-211ENST00000515597 PMPCBO75439 489 aa4.77□□□□□ -1.65
LINC01088-211ENST00000515597 GCATO75600 419 aa4.77□□□□□ -1.65
LINC01088-211ENST00000515597 HRGP04196 525 aa4.77□□□□□ -1.65
LINC01088-211ENST00000515597 BRAFP15056 766 aa4.77□□□□□ -1.65
LINC01088-211ENST00000515597 CNGA2Q16280 664 aa4.77□□□□□ -1.65
LINC01088-211ENST00000515597 MEX3CQ5U5Q3 659 aaKnown RBP4.77□□□□□ -1.65
LINC01088-211ENST00000515597 CHST15Q7LFX5 561 aaPredicted RBP4.77□□□□□ -1.65
LINC01088-211ENST00000515597 SRGAP1Q7Z6B7 1085 aa4.77□□□□□ -1.65
LINC01088-211ENST00000515597 SFTPA1Q8IWL2 248 aa4.77□□□□□ -1.65
LINC01088-211ENST00000515597 SIRT6Q8N6T7 355 aa4.77□□□□□ -1.65
LINC01088-211ENST00000515597 DNAJB14Q8TBM8 379 aa4.77□□□□□ -1.65
LINC01088-211ENST00000515597 CUL5Q93034 780 aa4.77□□□□□ -1.65
LINC01088-211ENST00000515597 DHX36Q9H2U1 1008 aaKnown RBP4.77□□□□□ -1.65
LINC01088-211ENST00000515597 SACM1LQ9NTJ5 587 aa4.77□□□□□ -1.65
LINC01088-211ENST00000515597 TFCP2L1Q9NZI6 479 aa4.77□□□□□ -1.65
LINC01088-211ENST00000515597 LPAR3Q9UBY5 353 aa4.77□□□□□ -1.65
LINC01088-211ENST00000515597 DDX20Q9UHI6 824 aaKnown RBP4.77□□□□□ -1.65
LINC01088-211ENST00000515597 AMFRQ9UKV5 643 aa4.77□□□□□ -1.65
LINC01088-211ENST00000515597 DRG1Q9Y295 367 aaKnown RBP4.77□□□□□ -1.65
LINC01088-211ENST00000515597 IGKV2D-30A0A075B6S6 120 aa4.76□□□□□ -1.65
LINC01088-211ENST00000515597 LY6G6EA0A0G2JKS1 128 aa4.76□□□□□ -1.65
LINC01088-211ENST00000515597 LOC102723971A0A1B0GUV8 181 aa4.76□□□□□ -1.65
LINC01088-211ENST00000515597 PSMD9O00233 223 aa4.76□□□□□ -1.65
LINC01088-211ENST00000515597 CD3EAPO15446 510 aaKnown RBP4.76□□□□□ -1.65
LINC01088-211ENST00000515597 SRGAP2O75044 1071 aa4.76□□□□□ -1.65
LINC01088-211ENST00000515597 ZBED1O96006 694 aa4.76□□□□□ -1.65
LINC01088-211ENST00000515597 FGAP02671 866 aa4.76□□□□□ -1.65
LINC01088-211ENST00000515597 CYP19A1P11511 503 aaPredicted RBP4.76□□□□□ -1.65
LINC01088-211ENST00000515597 MYF5P13349 255 aa4.76□□□□□ -1.65
LINC01088-211ENST00000515597 EPHA3P29320 983 aa4.76□□□□□ -1.65
LINC01088-211ENST00000515597 PRKAR1BP31321 381 aa4.76□□□□□ -1.65
LINC01088-211ENST00000515597 SUMO2P61956 95 aaKnown RBP4.76□□□□□ -1.65
LINC01088-211ENST00000515597 TIAL1Q01085 375 aaKnown RBP eCLIP4.76□□□□□ -1.65
LINC01088-211ENST00000515597 GHRHRQ02643 423 aa4.76□□□□□ -1.65
LINC01088-211ENST00000515597 POLD3Q15054 466 aaPredicted RBP4.76□□□□□ -1.65
LINC01088-211ENST00000515597 RAB11FIP4Q86YS3 637 aa4.76□□□□□ -1.65
LINC01088-211ENST00000515597 FAM156AQ8NDB6 213 aa4.76□□□□□ -1.65
LINC01088-211ENST00000515597 LRTOMTQ8WZ04 291 aa4.76□□□□□ -1.65
LINC01088-211ENST00000515597 CTHRC1Q96CG8 243 aa4.76□□□□□ -1.65
LINC01088-211ENST00000515597 APIPQ96GX9 242 aa4.76□□□□□ -1.65
LINC01088-211ENST00000515597 VN1R3Q9BXE9 311 aa4.76□□□□□ -1.65
LINC01088-211ENST00000515597 LRRC27Q9C0I9 530 aa4.76□□□□□ -1.65
LINC01088-211ENST00000515597 COL20A1Q9P218 1284 aa4.76□□□□□ -1.65
LINC01088-211ENST00000515597 TCEAL9Q9UHQ7 104 aa4.76□□□□□ -1.65
LINC01088-211ENST00000515597 CES2O00748 559 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 TPP1O14773 563 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 RRP9O43818 475 aaKnown RBP4.75□□□□□ -1.65
LINC01088-211ENST00000515597 A1BGP04217 495 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 SCP2P22307 547 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 UQCRC1P31930 480 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 TIRAPP58753 221 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 FMO1Q01740 532 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 ZNF91Q05481 1191 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 ARHGEF7Q14155 803 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 GBX1Q14549 363 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 NPY5RQ15761 445 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 ZNF750Q32MQ0 723 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 C3orf38Q5JPI3 329 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 C10orf25Q5T742 122 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 RNF220Q5VTB9 566 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 CACHD1Q5VU97 1274 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 PTCHD4Q6ZW05 846 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 KCTD20Q7Z5Y7 419 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 MYO1HQ8N1T3 1032 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 OSR1Q8TAX0 266 aaPredicted RBP4.75□□□□□ -1.65
LINC01088-211ENST00000515597 ADAMTS18Q8TE60 1221 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 NSMCE1Q8WV22 266 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 VCPIP1Q96JH7 1222 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 FYTTD1Q96QD9 318 aaKnown RBP4.75□□□□□ -1.65
LINC01088-211ENST00000515597 FOXP1Q9H334 677 aaPredicted RBP4.75□□□□□ -1.65
LINC01088-211ENST00000515597 TRIM36Q9NQ86 728 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 USP22Q9UPT9 525 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 NOTCH4Q99466 2003 aa4.75□□□□□ -1.65
LINC01088-211ENST00000515597 BTBD19C9JJ37 291 aa4.74□□□□□ -1.65
LINC01088-211ENST00000515597 H7C4K7 107 aa4.74□□□□□ -1.65
LINC01088-211ENST00000515597 RASSF9O75901 435 aa4.74□□□□□ -1.65
LINC01088-211ENST00000515597 IL1R1P14778 569 aa4.74□□□□□ -1.65
LINC01088-211ENST00000515597 CCKARP32238 428 aa4.74□□□□□ -1.65
LINC01088-211ENST00000515597 PTDSS1P48651 473 aaKnown RBP4.74□□□□□ -1.65
LINC01088-211ENST00000515597 RPS16P62249 146 aaKnown RBP4.74□□□□□ -1.65
LINC01088-211ENST00000515597 FAM193AP78312 1265 aa4.74□□□□□ -1.65
LINC01088-211ENST00000515597 DARS2Q6PI48 645 aaKnown RBP4.74□□□□□ -1.65
LINC01088-211ENST00000515597 CCDC149Q6ZUS6 474 aa4.74□□□□□ -1.65
LINC01088-211ENST00000515597 SESTD1Q86VW0 696 aa4.74□□□□□ -1.65
LINC01088-211ENST00000515597 ZNF398Q8TD17 642 aa4.74□□□□□ -1.65
LINC01088-211ENST00000515597 PNISRQ8TF01 805 aaKnown RBP4.74□□□□□ -1.65
LINC01088-211ENST00000515597 MSLNLQ96KJ4 702 aa4.74□□□□□ -1.65
LINC01088-211ENST00000515597 CCDC17Q96LX7 622 aa4.74□□□□□ -1.65
LINC01088-211ENST00000515597 GOLGA6CA6NDK9 693 aa4.73□□□□□ -1.65
LINC01088-211ENST00000515597 GOLGA6BA6NDN3 693 aa4.73□□□□□ -1.65
LINC01088-211ENST00000515597 GOLIM4O00461 696 aa4.73□□□□□ -1.65
LINC01088-211ENST00000515597 PPM1GO15355 546 aaPredicted RBP4.73□□□□□ -1.65
LINC01088-211ENST00000515597 RASAL1O95294 804 aa4.73□□□□□ -1.65
LINC01088-211ENST00000515597 TMEM191BP0C7N4 346 aa4.73□□□□□ -1.65
LINC01088-211ENST00000515597 GOLGA6DP0CG33 693 aa4.73□□□□□ -1.65
LINC01088-211ENST00000515597 TXNP10599 105 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms