RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 DDX42Q86XP3 938 aaKnown RBP eCLIP27.3■■□□□ 1.96
DDR1-279ENST00000515529 SIX5Q8N196 739 aa27.3■■□□□ 1.96
DDR1-279ENST00000515529 CSGALNACT1Q8TDX6 532 aa27.3■■□□□ 1.96
DDR1-279ENST00000515529 SH3RF2Q8TEC5 729 aa27.3■■□□□ 1.96
DDR1-279ENST00000515529 DNASE1L2Q92874 299 aa27.3■■□□□ 1.96
DDR1-279ENST00000515529 CDK5RAP1Q96SZ6 601 aaKnown RBP27.3■■□□□ 1.96
DDR1-279ENST00000515529 RNF38Q9H0F5 515 aa27.3■■□□□ 1.96
DDR1-279ENST00000515529 SMPD4Q9NXE4 827 aa27.3■■□□□ 1.96
DDR1-279ENST00000515529 CPQQ9Y646 472 aa27.3■■□□□ 1.96
DDR1-279ENST00000515529 MYO16Q9Y6X6 1858 aa27.3■■□□□ 1.96
DDR1-279ENST00000515529 EPHB6O15197 1021 aa27.29■■□□□ 1.96
DDR1-279ENST00000515529 GPR37L1O60883 481 aa27.29■■□□□ 1.96
DDR1-279ENST00000515529 OLFM2O95897 454 aa27.29■■□□□ 1.96
DDR1-279ENST00000515529 RARGP13631 454 aa27.29■■□□□ 1.96
DDR1-279ENST00000515529 STAT1P42224 750 aa27.29■■□□□ 1.96
DDR1-279ENST00000515529 ACADSBP45954 432 aa27.29■■□□□ 1.96
DDR1-279ENST00000515529 PBXIP1Q96AQ6 731 aa27.29■■□□□ 1.96
DDR1-279ENST00000515529 ASIC4Q96FT7 647 aa27.29■■□□□ 1.96
DDR1-279ENST00000515529 NOX5Q96PH1 765 aa27.29■■□□□ 1.96
DDR1-279ENST00000515529 CNGB3Q9NQW8 809 aa27.29■■□□□ 1.96
DDR1-279ENST00000515529 ARHGEF3Q9NR81 526 aa27.29■■□□□ 1.96
DDR1-279ENST00000515529 PCDHGC3Q9UN70 934 aa27.29■■□□□ 1.96
DDR1-279ENST00000515529 ANAPC1Q9H1A4 1944 aa27.29■■□□□ 1.96
DDR1-279ENST00000515529 GFPT2O94808 682 aa27.28■■□□□ 1.96
DDR1-279ENST00000515529 FBXO21O94952 628 aa27.28■■□□□ 1.96
DDR1-279ENST00000515529 SOX5P35711 763 aa27.28■■□□□ 1.96
DDR1-279ENST00000515529 ATP5C1P36542 298 aaKnown RBP27.28■■□□□ 1.96
DDR1-279ENST00000515529 GPD2P43304 727 aa27.28■■□□□ 1.96
DDR1-279ENST00000515529 MTF1Q14872 753 aa27.28■■□□□ 1.96
DDR1-279ENST00000515529 C10orf120Q5SQS8 335 aa27.28■■□□□ 1.96
DDR1-279ENST00000515529 RSRC2Q7L4I2 434 aaKnown RBP27.28■■□□□ 1.96
DDR1-279ENST00000515529 GOLGA1Q92805 767 aa27.28■■□□□ 1.96
DDR1-279ENST00000515529 NAP1L5Q96NT1 182 aaPredicted RBP27.28■■□□□ 1.96
DDR1-279ENST00000515529 LRRC3BQ96PB8 259 aa27.28■■□□□ 1.96
DDR1-279ENST00000515529 NMUR1Q9HB89 426 aa27.28■■□□□ 1.96
DDR1-279ENST00000515529 CYLDQ9NQC7 956 aa27.28■■□□□ 1.96
DDR1-279ENST00000515529 CLIC5Q9NZA1 410 aa27.28■■□□□ 1.96
DDR1-279ENST00000515529 LEFTY2O00292 366 aa27.27■■□□□ 1.96
DDR1-279ENST00000515529 PIK3R2O00459 728 aa27.27■■□□□ 1.96
DDR1-279ENST00000515529 STK25O00506 426 aa27.27■■□□□ 1.96
DDR1-279ENST00000515529 CYP11B1P15538 503 aa27.27■■□□□ 1.96
DDR1-279ENST00000515529 PGFP49763 221 aa27.27■■□□□ 1.96
DDR1-279ENST00000515529 UBASH3AP57075 661 aa27.27■■□□□ 1.96
DDR1-279ENST00000515529 YWHAGP61981 247 aaKnown RBP eCLIP27.27■■□□□ 1.96
DDR1-279ENST00000515529 GOLGA8FQ08AF8 430 aa27.27■■□□□ 1.96
DDR1-279ENST00000515529 GOLGA8DPQ0D2H9 430 aa27.27■■□□□ 1.96
DDR1-279ENST00000515529 USP4Q13107 963 aa27.27■■□□□ 1.96
DDR1-279ENST00000515529 ZNF77Q15935 545 aa27.27■■□□□ 1.96
DDR1-279ENST00000515529 SLC44A4Q53GD3 710 aa27.27■■□□□ 1.96
DDR1-279ENST00000515529 BTBD8Q5XKL5 378 aa27.27■■□□□ 1.96
DDR1-279ENST00000515529 PM20D1Q6GTS8 502 aa27.27■■□□□ 1.96
DDR1-279ENST00000515529 PASD1Q8IV76 773 aa27.27■■□□□ 1.96
DDR1-279ENST00000515529 STK32AQ8WU08 396 aa27.27■■□□□ 1.96
DDR1-279ENST00000515529 SHDQ96IW2 340 aa27.27■■□□□ 1.96
DDR1-279ENST00000515529 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.27■■□□□ 1.96
DDR1-279ENST00000515529 MUC3AQ02505 3323 aa27.27■■□□□ 1.96
DDR1-279ENST00000515529 A0A1W2PQC6 194 aa27.26■■□□□ 1.95
DDR1-279ENST00000515529 PRR33A8MZF0 331 aa27.26■■□□□ 1.95
DDR1-279ENST00000515529 TPM3P06753 285 aa27.26■■□□□ 1.95
DDR1-279ENST00000515529 TCF3P15923 654 aa27.26■■□□□ 1.95
DDR1-279ENST00000515529 IFNAR2P48551 515 aa27.26■■□□□ 1.95
DDR1-279ENST00000515529 JAM2P57087 298 aa27.26■■□□□ 1.95
DDR1-279ENST00000515529 SNX16P57768 344 aa27.26■■□□□ 1.95
DDR1-279ENST00000515529 MLF2Q15773 248 aaPredicted RBP27.26■■□□□ 1.95
DDR1-279ENST00000515529 SCD5Q86SK9 330 aa27.26■■□□□ 1.95
DDR1-279ENST00000515529 RNF214Q8ND24 703 aa27.26■■□□□ 1.95
DDR1-279ENST00000515529 ZFYVE19Q96K21 471 aa27.26■■□□□ 1.95
DDR1-279ENST00000515529 LHX5Q9H2C1 402 aa27.26■■□□□ 1.95
DDR1-279ENST00000515529 TRPV5Q9NQA5 729 aa27.26■■□□□ 1.95
DDR1-279ENST00000515529 GKN1Q9NS71 199 aa27.26■■□□□ 1.95
DDR1-279ENST00000515529 OSER1Q9NX31 292 aa27.26■■□□□ 1.95
DDR1-279ENST00000515529 DNMT3LQ9UJW3 386 aa27.26■■□□□ 1.95
DDR1-279ENST00000515529 ZNF445P59923 1031 aa27.25■■□□□ 1.95
DDR1-279ENST00000515529 NR1I3Q14994 352 aa27.25■■□□□ 1.95
DDR1-279ENST00000515529 TAF3Q5VWG9 929 aa27.25■■□□□ 1.95
DDR1-279ENST00000515529 SCML4Q8N228 414 aa27.25■■□□□ 1.95
DDR1-279ENST00000515529 IRGQQ8WZA9 623 aa27.25■■□□□ 1.95
DDR1-279ENST00000515529 MIS12Q9H081 205 aa27.25■■□□□ 1.95
DDR1-279ENST00000515529 DUS2Q9NX74 493 aaKnown RBP27.25■■□□□ 1.95
DDR1-279ENST00000515529 CFAP97Q9P2B7 532 aa27.25■■□□□ 1.95
DDR1-279ENST00000515529 SH3BP1Q9Y3L3 701 aa27.25■■□□□ 1.95
DDR1-279ENST00000515529 SART1O43290 800 aaKnown RBP27.24■■□□□ 1.95
DDR1-279ENST00000515529 TBX18O95935 607 aa27.24■■□□□ 1.95
DDR1-279ENST00000515529 KPNA1P52294 538 aaPredicted RBP27.24■■□□□ 1.95
DDR1-279ENST00000515529 DAOAP59103 153 aa27.24■■□□□ 1.95
DDR1-279ENST00000515529 PRKCQQ04759 706 aa27.24■■□□□ 1.95
DDR1-279ENST00000515529 PDCLQ13371 301 aa27.24■■□□□ 1.95
DDR1-279ENST00000515529 PDGFRLQ15198 375 aa27.24■■□□□ 1.95
DDR1-279ENST00000515529 KLHDC10Q6PID8 442 aa27.24■■□□□ 1.95
DDR1-279ENST00000515529 FMNL3Q8IVF7 1028 aa27.24■■□□□ 1.95
DDR1-279ENST00000515529 SUGP1Q8IWZ8 645 aaKnown RBP27.24■■□□□ 1.95
DDR1-279ENST00000515529 RNF139Q8WU17 664 aa27.24■■□□□ 1.95
DDR1-279ENST00000515529 NDRG1Q92597 394 aaKnown RBP27.24■■□□□ 1.95
DDR1-279ENST00000515529 C11orf16Q9NQ32 467 aa27.24■■□□□ 1.95
DDR1-279ENST00000515529 HEBP1Q9NRV9 189 aa27.24■■□□□ 1.95
DDR1-279ENST00000515529 NUDT5Q9UKK9 219 aa27.24■■□□□ 1.95
DDR1-279ENST00000515529 TECTAO75443 2155 aa27.24■■□□□ 1.95
DDR1-279ENST00000515529 CCDC172P0C7W6 258 aa27.23■■□□□ 1.95
DDR1-279ENST00000515529 HFE2Q6ZVN8 426 aa27.23■■□□□ 1.95
DDR1-279ENST00000515529 BMP8AQ7Z5Y6 402 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms