RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 BICD2Q8TD16 824 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 BIRC7Q96CA5 298 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 SIPA1Q96FS4 1042 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 FAM20AQ96MK3 541 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 NACC1Q96RE7 527 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 ELF4Q99607 663 aaPredicted RBP3.5□□□□□ -1.85
CHD1-211ENST00000514344 OXCT2Q9BYC2 517 aaPredicted RBP3.5□□□□□ -1.85
CHD1-211ENST00000514344 CCDC113Q9H0I3 377 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 C2orf40Q9H1Z8 148 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 CNTN3Q9P232 1028 aa3.5□□□□□ -1.85
CHD1-211ENST00000514344 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.5□□□□□ -1.85
CHD1-211ENST00000514344 CKAP5Q14008 2032 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 LRRK1Q38SD2 2015 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 A0A0A0MRY4 1105 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.49□□□□□ -1.85
CHD1-211ENST00000514344 RTN2O75298 545 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 CSO75390 466 aaKnown RBP3.49□□□□□ -1.85
CHD1-211ENST00000514344 DXOO77932 396 aaKnown RBP3.49□□□□□ -1.85
CHD1-211ENST00000514344 ODC1P11926 461 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 KCNE1P15382 129 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 CKMT2P17540 419 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 CYP2F1P24903 491 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 RBMS1P29558 406 aaKnown RBP3.49□□□□□ -1.85
CHD1-211ENST00000514344 CTSKP43235 329 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 UQCRFS1P47985 274 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 LSSP48449 732 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 ST3GAL1Q11201 340 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 CLN3Q13286 438 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 EPHA7Q15375 998 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 SAFBQ15424 915 aaKnown RBP eCLIP3.49□□□□□ -1.85
CHD1-211ENST00000514344 CCDC142Q17RM4 750 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 KRTAP21-3Q3LHN1 58 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 NUDT18Q6ZVK8 323 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 SPPL2BQ8TCT7 592 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 SAP25Q8TEE9 199 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 KCTD12Q96CX2 325 aaKnown RBP3.49□□□□□ -1.85
CHD1-211ENST00000514344 SGF29Q96ES7 293 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 SENP8Q96LD8 212 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 NUP58Q9BVL2 599 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 ACE2Q9BYF1 805 aaPredicted RBP3.49□□□□□ -1.85
CHD1-211ENST00000514344 RNF38Q9H0F5 515 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 GZF1Q9H116 711 aaPredicted RBP3.49□□□□□ -1.85
CHD1-211ENST00000514344 ITM2CQ9NQX7 267 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 TMLHEQ9NVH6 421 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 DNAJC17Q9NVM6 304 aaKnown RBP3.49□□□□□ -1.85
CHD1-211ENST00000514344 GCNT4Q9P109 453 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 USP36Q9P275 1121 aaKnown RBP3.49□□□□□ -1.85
CHD1-211ENST00000514344 CFAP97Q9P2B7 532 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 HSFX1Q9UBD0 423 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 UXTQ9UBK9 157 aaPredicted RBP3.49□□□□□ -1.85
CHD1-211ENST00000514344 ARHGAP26Q9UNA1 814 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 CPQQ9Y646 472 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 KLF18A0A0U1RQI7 1052 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 K7ERI5 159 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 TULP1O00294 542 aaPredicted RBP3.49□□□□□ -1.85
CHD1-211ENST00000514344 MTSS1O43312 755 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 CXCL8P10145 99 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 SFTPCP11686 197 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 DCTP40126 519 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 INHBCP55103 352 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 LILRA4P59901 499 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 DAB2P98082 770 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 STARD3Q14849 445 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 CLCA4Q14CN2 919 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 SLC10A6Q3KNW5 377 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 TMEM25Q86YD3 366 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 SCN4BQ8IWT1 228 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 ETFBKMTQ8IXQ9 262 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 ZNF564Q8TBZ8 553 aaPredicted RBP3.49□□□□□ -1.85
CHD1-211ENST00000514344 SCFD1Q8WVM8 642 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 PRCCQ92733 491 aaPredicted RBP3.49□□□□□ -1.85
CHD1-211ENST00000514344 CCDC97Q96F63 343 aaPredicted RBP3.49□□□□□ -1.85
CHD1-211ENST00000514344 ZBTB45Q96K62 511 aaPredicted RBP3.49□□□□□ -1.85
CHD1-211ENST00000514344 SLC46A1Q96NT5 459 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 EIF2AK1Q9BQI3 630 aaKnown RBP3.49□□□□□ -1.85
CHD1-211ENST00000514344 TARS2Q9BW92 718 aaKnown RBP3.49□□□□□ -1.85
CHD1-211ENST00000514344 TRIM9Q9C026 710 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 ZCWPW1Q9H0M4 648 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 ABCG4Q9H172 646 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 TTC12Q9H892 705 aaPredicted RBP3.49□□□□□ -1.85
CHD1-211ENST00000514344 ZNF71Q9NQZ8 489 aaPredicted RBP3.49□□□□□ -1.85
CHD1-211ENST00000514344 STARD13Q9Y3M8 1113 aa3.49□□□□□ -1.85
CHD1-211ENST00000514344 RBM8AQ9Y5S9 174 aaKnown RBP3.49□□□□□ -1.85
CHD1-211ENST00000514344 MAP1AP78559 2803 aaPredicted RBP3.49□□□□□ -1.85
CHD1-211ENST00000514344 NBEAL1Q6ZS30 2694 aa3.48□□□□□ -1.85
CHD1-211ENST00000514344 CYP3A7-CYP3A51PA0A087WV96 503 aa3.48□□□□□ -1.85
CHD1-211ENST00000514344 A0A1W2PNU3 283 aaPredicted RBP3.48□□□□□ -1.85
CHD1-211ENST00000514344 NEDD8-MDP1E9PL57 170 aa3.48□□□□□ -1.85
CHD1-211ENST00000514344 AGRPO00253 132 aa3.48□□□□□ -1.85
CHD1-211ENST00000514344 SLC9A3R1O14745 358 aaPredicted RBP3.48□□□□□ -1.85
CHD1-211ENST00000514344 CYP26A1O43174 497 aa3.48□□□□□ -1.85
CHD1-211ENST00000514344 CCNT1O60563 726 aaKnown RBP3.48□□□□□ -1.85
CHD1-211ENST00000514344 GJB6O95452 261 aa3.48□□□□□ -1.85
CHD1-211ENST00000514344 CYP3A7P24462 503 aa3.48□□□□□ -1.85
CHD1-211ENST00000514344 CASRP41180 1078 aa3.48□□□□□ -1.85
CHD1-211ENST00000514344 AARSP49588 968 aaKnown RBP eCLIP3.48□□□□□ -1.85
CHD1-211ENST00000514344 MLLT10P55197 1068 aa3.48□□□□□ -1.85
CHD1-211ENST00000514344 AKAP17AQ02040 695 aaKnown RBP3.48□□□□□ -1.85
CHD1-211ENST00000514344 GAD2Q05329 585 aa3.48□□□□□ -1.85
CHD1-211ENST00000514344 IFRD2Q12894 506 aaPredicted RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms