RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 KRT31Q15323 416 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 PKDCCQ504Y2 493 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 RAB41Q5JT25 222 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 HECTD3Q5T447 861 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 STXBP5Q5T5C0 1151 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 RRAGAQ7L523 313 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 ARHGEF19Q8IW93 802 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 SUGP1Q8IWZ8 645 aaKnown RBP8.63□□□□□ -1.03
NEDD4-210ENST00000513957 FBXL6Q8N531 539 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 MAB21L3Q8N8X9 362 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 LRRN4Q8WUT4 740 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 RSAD2Q8WXG1 361 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 ZDHHC16Q969W1 377 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 EXOC4Q96A65 974 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 HSFY1Q96LI6 401 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 ZSWIM3Q96MP5 696 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 KREMEN1Q96MU8 473 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 KXD1Q9BQD3 176 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 TRIM62Q9BVG3 475 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 OSBPL6Q9BZF3 934 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 BRD9Q9H8M2 597 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 UBE2TQ9NPD8 197 aaPredicted RBP8.63□□□□□ -1.03
NEDD4-210ENST00000513957 C11orf16Q9NQ32 467 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 CYLDQ9NQC7 956 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 ARHGEF3Q9NR81 526 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 FANCLQ9NW38 375 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 CLIC5Q9NZA1 410 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.63□□□□□ -1.03
NEDD4-210ENST00000513957 MRPS17Q9Y2R5 130 aaKnown RBP8.63□□□□□ -1.03
NEDD4-210ENST00000513957 TRIOO75962 3097 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 KIAA1549LQ6ZVL6 1849 aa8.63□□□□□ -1.03
NEDD4-210ENST00000513957 LGALS16A8MUM7 142 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 BECN2A8MW95 431 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 ARNTLO00327 626 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 PES1O00541 588 aaKnown RBP8.62□□□□□ -1.03
NEDD4-210ENST00000513957 MAN2B1O00754 1011 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 NRG2O14511 850 aaPredicted RBP8.62□□□□□ -1.03
NEDD4-210ENST00000513957 SLC9A3R1O14745 358 aaPredicted RBP8.62□□□□□ -1.03
NEDD4-210ENST00000513957 SART1O43290 800 aaKnown RBP8.62□□□□□ -1.03
NEDD4-210ENST00000513957 BEST1O76090 585 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 FBXO21O94952 628 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 PRAMEF12O95522 483 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 KRT5P13647 590 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 HDCP19113 662 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 SLC9A1P19634 815 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 GNA15P30679 374 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 ACADSBP45954 432 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 CLCN5P51795 746 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 COPB1P53618 953 aaKnown RBP8.62□□□□□ -1.03
NEDD4-210ENST00000513957 SNX16P57768 344 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 STARD6P59095 220 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 GPC5P78333 572 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 AMPD2Q01433 879 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 PTK2Q05397 1052 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 PDGFRLQ15198 375 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 MLF2Q15773 248 aaPredicted RBP8.62□□□□□ -1.03
NEDD4-210ENST00000513957 ZNF77Q15935 545 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 GOLGA7BQ2TAP0 167 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 TXNDC8Q6A555 127 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 CC2D1AQ6P1N0 951 aaPredicted RBP8.62□□□□□ -1.03
NEDD4-210ENST00000513957 PIGZQ86VD9 579 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 TTC30AQ86WT1 665 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 AOPEPQ8N6M6 819 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 CSGALNACT1Q8TDX6 532 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 USP13Q92995 863 aaPredicted RBP8.62□□□□□ -1.03
NEDD4-210ENST00000513957 OTUB2Q96DC9 234 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 ERGIC2Q96RQ1 377 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 NELL2Q99435 816 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 CRACR2AQ9BSW2 395 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 IER2Q9BTL4 223 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 LRFN3Q9BTN0 628 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 RPP25Q9BUL9 199 aaKnown RBP8.62□□□□□ -1.03
NEDD4-210ENST00000513957 DDX23Q9BUQ8 820 aaKnown RBP8.62□□□□□ -1.03
NEDD4-210ENST00000513957 MFSD1Q9H3U5 465 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 C8orf33Q9H7E9 229 aaPredicted RBP8.62□□□□□ -1.03
NEDD4-210ENST00000513957 LRRC4Q9HBW1 653 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 TRPC7Q9HCX4 862 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 SIX2Q9NPC8 291 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 CNGB3Q9NQW8 809 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 OLA1Q9NTK5 396 aaKnown RBP8.62□□□□□ -1.03
NEDD4-210ENST00000513957 PCDHGC3Q9UN70 934 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 COL4A3Q01955 1670 aa8.62□□□□□ -1.03
NEDD4-210ENST00000513957 SYCE3A1L190 88 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 C2orf78A6NCI8 922 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 NCAM2O15394 837 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 NARSO43776 548 aaKnown RBP8.61□□□□□ -1.03
NEDD4-210ENST00000513957 TLR5O60602 858 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 CFHP08603 1231 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 RALAP11233 206 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 UCHL3P15374 230 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 GDI1P31150 447 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 ATP5C1P36542 298 aaKnown RBP8.61□□□□□ -1.03
NEDD4-210ENST00000513957 VIPR2P41587 438 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 RPL34P49207 117 aaKnown RBP8.61□□□□□ -1.03
NEDD4-210ENST00000513957 CDR1P51861 262 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 KCNMA1Q12791 1236 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 IFRD2Q12894 506 aaPredicted RBP8.61□□□□□ -1.03
NEDD4-210ENST00000513957 MTF1Q14872 753 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 FILIP1LQ4L180 1135 aa8.61□□□□□ -1.03
NEDD4-210ENST00000513957 KLHDC7AQ5VTJ3 777 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms