RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 DCAF1Q9Y4B6 1507 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 ADGRA2Q96PE1 1338 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 FANCIQ9NVI1 1328 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 PNMA6EA0A0J9YXQ4 647 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 A1L4Q6 167 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 HMX3A6NHT5 357 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 VWC2LB2RUY7 222 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 EXOC5O00471 708 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 SLC16A3O15427 465 aaKnown RBP5.04□□□□□ -1.6
NIPBL-207ENST00000513819 ACTL6BO94805 426 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 FESP07332 822 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 CHRM2P08172 466 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 LIPAP38571 399 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 MMP14P50281 582 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 ARL4CP56559 192 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 CALD1Q05682 793 aaKnown RBP5.04□□□□□ -1.6
NIPBL-207ENST00000513819 ITIH3Q06033 890 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 TBCCQ15814 346 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 BTBD16Q32M84 506 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 TREML2Q5T2D2 321 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 VWA1Q6PCB0 445 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 KCNV1Q6PIU1 500 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 CAND1Q86VP6 1230 aaKnown RBP5.04□□□□□ -1.6
NIPBL-207ENST00000513819 SUN3Q8TAQ9 357 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 HAS1Q92839 578 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 FKBP10Q96AY3 582 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 GPR20Q99678 358 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 RTKNQ9BST9 563 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 C1QTNF3Q9BXJ4 246 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 PABPC3Q9H361 631 aaKnown RBP5.04□□□□□ -1.6
NIPBL-207ENST00000513819 C9orf78Q9NZ63 289 aaPredicted RBP5.04□□□□□ -1.6
NIPBL-207ENST00000513819 DKK3Q9UBP4 350 aa5.04□□□□□ -1.6
NIPBL-207ENST00000513819 CLGNO14967 610 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 IRAK2O43187 625 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 DHHO43323 396 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 PPFIA4O75335 1185 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 TAF5LO75529 589 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 EGR2P11161 476 aaPredicted RBP5.03□□□□□ -1.6
NIPBL-207ENST00000513819 NXPH1P58417 271 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 AP2B1P63010 937 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 RINT1Q6NUQ1 792 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 DPY19L3Q6ZPD9 716 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 RFX8Q6ZV50 586 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 RHOUQ7L0Q8 258 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 MOGAT3Q86VF5 341 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 ANKRD18AQ8IVF6 992 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 SLC44A2Q8IWA5 706 aaPredicted RBP5.03□□□□□ -1.6
NIPBL-207ENST00000513819 LNX2Q8N448 690 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 SUPT20HQ8NEM7 779 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 PROKR1Q8TCW9 393 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 XAGE5Q8WWM1 108 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 SOCS4Q8WXH5 440 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 LENG9Q96B70 501 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 FBXL20Q96IG2 436 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 Q96MF0 132 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 WDR24Q96S15 920 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 AIFM2Q9BRQ8 373 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 MLST8Q9BVC4 326 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 WDR11Q9BZH6 1224 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 ZCWPW1Q9H0M4 648 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 PRDM8Q9NQV8 689 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 KCTD5Q9NXV2 234 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 COL15A1P39059 1388 aa5.03□□□□□ -1.6
NIPBL-207ENST00000513819 B9A039 149 aa5.02□□□□□ -1.61
NIPBL-207ENST00000513819 EIF3FO00303 357 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-207ENST00000513819 YY2O15391 372 aa5.02□□□□□ -1.61
NIPBL-207ENST00000513819 PROM1O43490 865 aa5.02□□□□□ -1.61
NIPBL-207ENST00000513819 CBFA2T3O75081 653 aa5.02□□□□□ -1.61
NIPBL-207ENST00000513819 PEX11BO96011 259 aa5.02□□□□□ -1.61
NIPBL-207ENST00000513819 IL6RP08887 468 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-207ENST00000513819 PTGS2P35354 604 aa5.02□□□□□ -1.61
NIPBL-207ENST00000513819 PBX1P40424 430 aa5.02□□□□□ -1.61
NIPBL-207ENST00000513819 PRKAA2P54646 552 aa5.02□□□□□ -1.61
NIPBL-207ENST00000513819 POLE2P56282 527 aa5.02□□□□□ -1.61
NIPBL-207ENST00000513819 EFEMP1Q12805 493 aa5.02□□□□□ -1.61
NIPBL-207ENST00000513819 TUBA3CQ13748 450 aa5.02□□□□□ -1.61
NIPBL-207ENST00000513819 P3H1Q32P28 736 aa5.02□□□□□ -1.61
NIPBL-207ENST00000513819 ALFQ53S48 1182 aa5.02□□□□□ -1.61
NIPBL-207ENST00000513819 ATPAF1Q5TC12 328 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-207ENST00000513819 TUBA3EQ6PEY2 450 aa5.02□□□□□ -1.61
NIPBL-207ENST00000513819 RRAGAQ7L523 313 aa5.02□□□□□ -1.61
NIPBL-207ENST00000513819 MRGPREQ86SM8 312 aa5.02□□□□□ -1.61
NIPBL-207ENST00000513819 NRSN1Q8IZ57 195 aa5.02□□□□□ -1.61
NIPBL-207ENST00000513819 GPATCH11Q8N954 259 aa5.02□□□□□ -1.61
NIPBL-207ENST00000513819 ZNF622Q969S3 477 aaKnown RBP eCLIP5.02□□□□□ -1.613e-6■□□□□ 10.4
NIPBL-207ENST00000513819 PGBD1Q96JS3 809 aa5.02□□□□□ -1.61
NIPBL-207ENST00000513819 UBXN10Q96LJ8 280 aa5.02□□□□□ -1.61
NIPBL-207ENST00000513819 ZSCAN31Q96LW9 406 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-207ENST00000513819 KIF17Q9P2E2 1029 aa5.02□□□□□ -1.61
NIPBL-207ENST00000513819 STEAP1Q9UHE8 339 aa5.02□□□□□ -1.61
NIPBL-207ENST00000513819 REXO2Q9Y3B8 237 aaKnown RBP5.02□□□□□ -1.61
NIPBL-207ENST00000513819 PIPSLA2A3N6 862 aa5.01□□□□□ -1.61
NIPBL-207ENST00000513819 PSMD9O00233 223 aa5.01□□□□□ -1.61
NIPBL-207ENST00000513819 PEX1O43933 1283 aa5.01□□□□□ -1.61
NIPBL-207ENST00000513819 SH3BP5O60239 455 aa5.01□□□□□ -1.61
NIPBL-207ENST00000513819 PPP6R2O75170 966 aa5.01□□□□□ -1.61
NIPBL-207ENST00000513819 RPP40O75818 363 aaKnown RBP5.01□□□□□ -1.61
NIPBL-207ENST00000513819 WDR47O94967 919 aa5.01□□□□□ -1.61
NIPBL-207ENST00000513819 DRD1P21728 446 aa5.01□□□□□ -1.61
NIPBL-207ENST00000513819 POU5F1BQ06416 359 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms