RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 HOXD8P13378 290 aaPredicted RBP9.62□□□□□ -0.87
CPNE4-210ENST00000512332 SDC4P31431 198 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 ZNF200P98182 395 aaPredicted RBP9.62□□□□□ -0.87
CPNE4-210ENST00000512332 CDC42EP1Q00587 391 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 KRT81Q14533 505 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 EFTUD2Q15029 972 aaKnown RBP eCLIP9.62□□□□□ -0.87
CPNE4-210ENST00000512332 PCBP1Q15365 356 aaKnown RBP eCLIP9.62□□□□□ -0.87
CPNE4-210ENST00000512332 SEPT7Q16181 437 aaKnown RBP9.62□□□□□ -0.87
CPNE4-210ENST00000512332 FYB2Q5VWT5 728 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 SESTD1Q86VW0 696 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 UNC93AQ86WB7 457 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 IGDCC3Q8IVU1 814 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 AGGF1Q8N302 714 aaeCLIP9.62□□□□□ -0.87
CPNE4-210ENST00000512332 PQLC3Q8N755 202 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 ZC3H15Q8WU90 426 aaKnown RBP9.62□□□□□ -0.87
CPNE4-210ENST00000512332 KHSRPQ92945 711 aaKnown RBP eCLIP9.62□□□□□ -0.87
CPNE4-210ENST00000512332 OPTNQ96CV9 577 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 ETNK1Q9HBU6 452 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 PCDH18Q9HCL0 1135 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 SAR1AQ9NR31 198 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 IKBKGQ9Y6K9 419 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 PLXNA1Q9UIW2 1896 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 H3BRB1 525 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 H7C0C1 242 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 ECM2O94769 699 aaPredicted RBP9.62□□□□□ -0.87
CPNE4-210ENST00000512332 C1QAP02745 245 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 VTNP04004 478 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 TROVE2P10155 538 aaKnown RBP eCLIP9.62□□□□□ -0.87
CPNE4-210ENST00000512332 ADRA1DP25100 572 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 ETV4P43268 484 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 PTPN9P43378 593 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 ATP5OP48047 213 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 RPL34P49207 117 aaKnown RBP9.62□□□□□ -0.87
CPNE4-210ENST00000512332 NEK3P51956 506 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 BCAR1P56945 870 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 CCNA1P78396 465 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 ZBTB6Q15916 424 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 C15orf59Q2T9L4 293 aaPredicted RBP9.62□□□□□ -0.87
CPNE4-210ENST00000512332 ARHGAP17Q68EM7 881 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 PMF1Q6P1K2 205 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 NPNTQ6UXI9 565 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 ZC3H18Q86VM9 953 aaKnown RBP9.62□□□□□ -0.87
CPNE4-210ENST00000512332 SLC26A11Q86WA9 606 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 LRRC52Q8N7C0 313 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 GPRC5AQ8NFJ5 357 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 NLRP7Q8WX94 980 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 CENPIQ92674 756 aaPredicted RBP9.62□□□□□ -0.87
CPNE4-210ENST00000512332 ERP27Q96DN0 273 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 MRRFQ96E11 262 aaKnown RBP9.62□□□□□ -0.87
CPNE4-210ENST00000512332 CDCA5Q96FF9 252 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 KIF12Q96FN5 646 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 L3MBTL3Q96JM7 780 aaPredicted RBP9.62□□□□□ -0.87
CPNE4-210ENST00000512332 KLC2Q9H0B6 622 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 TUT1Q9H6E5 874 aaKnown RBP9.62□□□□□ -0.87
CPNE4-210ENST00000512332 MANSC1Q9H8J5 431 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 MCM8Q9UJA3 840 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 RPL26L1Q9UNX3 145 aaKnown RBP9.62□□□□□ -0.87
CPNE4-210ENST00000512332 CHMP2BQ9UQN3 213 aa9.62□□□□□ -0.87
CPNE4-210ENST00000512332 KBTBD13C9JR72 458 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 KLF11O14901 512 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 STRNO43815 780 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 INHBAP08476 426 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 ZFXP17010 805 aaPredicted RBP9.61□□□□□ -0.87
CPNE4-210ENST00000512332 PRKCHP24723 683 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 MAP2K2P36507 400 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 NR2C2P49116 596 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 PTK7Q13308 1070 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 SNAPC2Q13487 334 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 GOLGA7BQ2TAP0 167 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 KBTBD12Q3ZCT8 623 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 MARCH8Q5T0T0 291 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 PPP1R26Q5T8A7 1209 aaPredicted RBP9.61□□□□□ -0.87
CPNE4-210ENST00000512332 LGSNQ5TDP6 509 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 CYS1Q717R9 158 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 TTC30AQ86WT1 665 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 TMEM130Q8N3G9 435 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 C12orf29Q8N999 325 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 PCDH19Q8TAB3 1148 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 FAM172AQ8WUF8 416 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 APOPT1Q96IL0 206 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 PIWIL1Q96J94 861 aaKnown RBP9.61□□□□□ -0.87
CPNE4-210ENST00000512332 C11orf84Q9BUA3 381 aaPredicted RBP9.61□□□□□ -0.87
CPNE4-210ENST00000512332 KATNBL1Q9H079 304 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 PRDM16Q9HAZ2 1276 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 RAB6BQ9NRW1 208 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 HESX1Q9UBX0 185 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 SBF1O95248 1867 aa9.61□□□□□ -0.87
CPNE4-210ENST00000512332 CITO14578 2027 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 KCNN4O15554 427 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 PAPSS1O43252 624 aaPredicted RBP9.6□□□□□ -0.87
CPNE4-210ENST00000512332 LPXNO60711 386 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 GCATO75600 419 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 ZBED1O96006 694 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 T-ENOLP0DO92 83 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 CYP2C8P10632 490 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 MAGEA3P43357 314 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 YWHAZP63104 245 aaKnown RBP9.6□□□□□ -0.87
CPNE4-210ENST00000512332 ATP11AP98196 1134 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 DPYSL2Q16555 572 aa9.6□□□□□ -0.87
CPNE4-210ENST00000512332 TTC39BQ5VTQ0 682 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms