RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 SOBPA7XYQ1 873 aa14.29□□□□□ -0.12
SNF8-206ENST00000509989 EPHB6O15197 1021 aa14.29□□□□□ -0.12
SNF8-206ENST00000509989 GREM1O60565 184 aa14.29□□□□□ -0.12
SNF8-206ENST00000509989 PAEPP09466 180 aa14.29□□□□□ -0.12
SNF8-206ENST00000509989 ATP1A3P13637 1013 aa14.29□□□□□ -0.12
SNF8-206ENST00000509989 CTHP32929 405 aa14.29□□□□□ -0.12
SNF8-206ENST00000509989 TKTL1P51854 596 aa14.29□□□□□ -0.12
SNF8-206ENST00000509989 KPNA1P52294 538 aaPredicted RBP14.29□□□□□ -0.12
SNF8-206ENST00000509989 YWHAEP62258 255 aaKnown RBP14.29□□□□□ -0.12
SNF8-206ENST00000509989 MESP2Q0VG99 397 aa14.29□□□□□ -0.12
SNF8-206ENST00000509989 CETN1Q12798 172 aa14.29□□□□□ -0.12
SNF8-206ENST00000509989 RUNX3Q13761 415 aa14.29□□□□□ -0.12
SNF8-206ENST00000509989 GAS6Q14393 721 aa14.29□□□□□ -0.12
SNF8-206ENST00000509989 PON2Q15165 354 aa14.29□□□□□ -0.12
SNF8-206ENST00000509989 HECTD3Q5T447 861 aa14.29□□□□□ -0.12
SNF8-206ENST00000509989 LCLAT1Q6UWP7 414 aa14.29□□□□□ -0.12
SNF8-206ENST00000509989 DTWD2Q8NBA8 298 aa14.29□□□□□ -0.12
SNF8-206ENST00000509989 CSGALNACT1Q8TDX6 532 aa14.29□□□□□ -0.12
SNF8-206ENST00000509989 SLC35F5Q8WV83 523 aa14.29□□□□□ -0.12
SNF8-206ENST00000509989 FAM3CQ92520 227 aa14.29□□□□□ -0.12
SNF8-206ENST00000509989 EZH1Q92800 747 aaPredicted RBP14.29□□□□□ -0.12
SNF8-206ENST00000509989 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.29□□□□□ -0.12
SNF8-206ENST00000509989 POLR3BQ9NW08 1133 aaPredicted RBP14.29□□□□□ -0.12
SNF8-206ENST00000509989 ANO10Q9NW15 660 aa14.29□□□□□ -0.12
SNF8-206ENST00000509989 COMMD8Q9NX08 183 aa14.29□□□□□ -0.12
SNF8-206ENST00000509989 DUS2Q9NX74 493 aaKnown RBP14.29□□□□□ -0.12
SNF8-206ENST00000509989 APEX2Q9UBZ4 518 aa14.29□□□□□ -0.12
SNF8-206ENST00000509989 DNAJC12Q9UKB3 198 aa14.29□□□□□ -0.12
SNF8-206ENST00000509989 GTPBP10A4D1E9 387 aaKnown RBP14.28□□□□□ -0.12
SNF8-206ENST00000509989 M0QYV0 167 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 FOXN3O00409 490 aaPredicted RBP14.28□□□□□ -0.12
SNF8-206ENST00000509989 PES1O00541 588 aaKnown RBP14.28□□□□□ -0.12
SNF8-206ENST00000509989 XPO1O14980 1071 aaKnown RBP14.28□□□□□ -0.12
SNF8-206ENST00000509989 TLR5O60602 858 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 LETM1O95202 739 aaPredicted RBP14.28□□□□□ -0.12
SNF8-206ENST00000509989 RARGP13631 454 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 LCP1P13796 627 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 TCF3P15923 654 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 ZNF18P17022 549 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 CLCN1P35523 988 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 USP8P40818 1118 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 BCAT1P54687 386 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 ADIGQ0VDE8 80 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 BST2Q10589 180 aaKnown RBP14.28□□□□□ -0.12
SNF8-206ENST00000509989 CNGA2Q16280 664 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 PKN3Q6P5Z2 889 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 Q6ZS52 159 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 CCDC186Q7Z3E2 898 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 FAM114A1Q8IWE2 563 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 SFTPA1Q8IWL2 248 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 DHX40Q8IX18 779 aaKnown RBP14.28□□□□□ -0.12
SNF8-206ENST00000509989 MAML2Q8IZL2 1156 aaPredicted RBP14.28□□□□□ -0.12
SNF8-206ENST00000509989 PDZD8Q8NEN9 1154 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 OSCP1Q8WVF1 389 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 OVCA2Q8WZ82 227 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 SHC3Q92529 594 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 LSM14BQ9BX40 385 aaKnown RBP14.28□□□□□ -0.12
SNF8-206ENST00000509989 KLF16Q9BXK1 252 aaPredicted RBP14.28□□□□□ -0.12
SNF8-206ENST00000509989 FBXO44Q9H4M3 255 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 FAM124BQ9H5Z6 455 aaPredicted RBP14.28□□□□□ -0.12
SNF8-206ENST00000509989 KIF9Q9HAQ2 790 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 PNPLA8Q9NP80 782 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 NAGPAQ9UK23 515 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 HCN4Q9Y3Q4 1203 aa14.28□□□□□ -0.12
SNF8-206ENST00000509989 MYO18AQ92614 2054 aaKnown RBP14.27□□□□□ -0.12
SNF8-206ENST00000509989 SYCE3A1L190 88 aa14.27□□□□□ -0.13
SNF8-206ENST00000509989 YJEFN3A6XGL0 299 aa14.27□□□□□ -0.13
SNF8-206ENST00000509989 E7ENQ6 273 aa14.27□□□□□ -0.13
SNF8-206ENST00000509989 GALR2O43603 387 aaPredicted RBP14.27□□□□□ -0.13
SNF8-206ENST00000509989 CHRNB1P11230 501 aa14.27□□□□□ -0.13
SNF8-206ENST00000509989 RFX1P22670 979 aa14.27□□□□□ -0.13
SNF8-206ENST00000509989 EEF1GP26641 437 aaKnown RBP14.27□□□□□ -0.13
SNF8-206ENST00000509989 GJA4P35212 333 aa14.27□□□□□ -0.13
SNF8-206ENST00000509989 PLA2G4AP47712 749 aa14.27□□□□□ -0.13
SNF8-206ENST00000509989 PPP3CCP48454 512 aa14.27□□□□□ -0.13
SNF8-206ENST00000509989 COPB1P53618 953 aaKnown RBP14.27□□□□□ -0.13
SNF8-206ENST00000509989 ITPRIPL2Q3MIP1 535 aa14.27□□□□□ -0.13
SNF8-206ENST00000509989 CT47A1Q5JQC4 288 aaPredicted RBP14.27□□□□□ -0.13
SNF8-206ENST00000509989 KLHDC7AQ5VTJ3 777 aa14.27□□□□□ -0.13
SNF8-206ENST00000509989 ZNF852Q6ZMS4 543 aa14.27□□□□□ -0.13
SNF8-206ENST00000509989 C12orf40Q86WS4 652 aa14.27□□□□□ -0.13
SNF8-206ENST00000509989 BBS7Q8IWZ6 715 aa14.27□□□□□ -0.13
SNF8-206ENST00000509989 WDTC1Q8N5D0 677 aa14.27□□□□□ -0.13
SNF8-206ENST00000509989 ZNF606Q8WXB4 792 aa14.27□□□□□ -0.13
SNF8-206ENST00000509989 SHDQ96IW2 340 aa14.27□□□□□ -0.13
SNF8-206ENST00000509989 NAA15Q9BXJ9 866 aaKnown RBP14.27□□□□□ -0.13
SNF8-206ENST00000509989 UBXN6Q9BZV1 441 aa14.27□□□□□ -0.13
SNF8-206ENST00000509989 ECT2Q9H8V3 914 aa14.27□□□□□ -0.13
SNF8-206ENST00000509989 PLCB1Q9NQ66 1216 aa14.27□□□□□ -0.13
SNF8-206ENST00000509989 CYLDQ9NQC7 956 aa14.27□□□□□ -0.13
SNF8-206ENST00000509989 TLR8Q9NR97 1041 aaKnown RBP14.27□□□□□ -0.13
SNF8-206ENST00000509989 EHD2Q9NZN4 543 aa14.27□□□□□ -0.13
SNF8-206ENST00000509989 ZMYM5Q9UJ78 669 aa14.27□□□□□ -0.13
SNF8-206ENST00000509989 EML5Q05BV3 1969 aa14.26□□□□□ -0.13
SNF8-206ENST00000509989 CYP17A1P05093 508 aa14.26□□□□□ -0.13
SNF8-206ENST00000509989 HMBSP08397 361 aa14.26□□□□□ -0.13
SNF8-206ENST00000509989 GPD2P43304 727 aa14.26□□□□□ -0.13
SNF8-206ENST00000509989 SLC6A11P48066 632 aa14.26□□□□□ -0.13
SNF8-206ENST00000509989 IFNAR2P48551 515 aa14.26□□□□□ -0.13
SNF8-206ENST00000509989 MFAP3P55082 362 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms