RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 CLSTN1O94985 981 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 ABL1P00519 1130 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 GBP1P32455 592 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 OPRD1P41143 372 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 PRCPP42785 496 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 AP3M2P53677 418 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 SLC5A3P53794 718 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 SLC7A9P82251 487 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 CREB5Q02930 508 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 N4BP2L1Q5TBK1 243 aaPredicted RBP11.56□□□□□ -0.56
RNF4-212ENST00000509258 TCEAL6Q6IPX3 200 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 FILIP1Q7Z7B0 1213 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 C12orf40Q86WS4 652 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 DDX42Q86XP3 938 aaKnown RBP eCLIP11.56□□□□□ -0.56
RNF4-212ENST00000509258 NUP93Q8N1F7 819 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 SLC2A14Q8TDB8 520 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 TCEAL3Q969E4 200 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 SLITRK1Q96PX8 696 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 ARID3AQ99856 593 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 MED10Q9BTT4 135 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 EDEM2Q9BV94 578 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 LSM14BQ9BX40 385 aaKnown RBP11.56□□□□□ -0.56
RNF4-212ENST00000509258 SMOC1Q9H4F8 434 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 CCSER2Q9H7U1 834 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 OSER1Q9NX31 292 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 GMIPQ9P107 970 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 CHORDC1Q9UHD1 332 aaPredicted RBP11.56□□□□□ -0.56
RNF4-212ENST00000509258 PLXND1Q9Y4D7 1925 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 CHD6Q8TD26 2715 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 ATP8B3O60423 1300 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 PI4KAP42356 2102 aa11.56□□□□□ -0.56
RNF4-212ENST00000509258 BCLAF3A2AJT9 711 aaKnown RBP11.55□□□□□ -0.56
RNF4-212ENST00000509258 IKBKBO14920 756 aa11.55□□□□□ -0.56
RNF4-212ENST00000509258 COCHO43405 550 aa11.55□□□□□ -0.56
RNF4-212ENST00000509258 CAVIN2O95810 425 aa11.55□□□□□ -0.56
RNF4-212ENST00000509258 CYP17A1P05093 508 aa11.55□□□□□ -0.56
RNF4-212ENST00000509258 ZDHHC11BP0C7U3 371 aa11.55□□□□□ -0.56
RNF4-212ENST00000509258 CD44P16070 742 aaKnown RBP11.55□□□□□ -0.56
RNF4-212ENST00000509258 TRIM21P19474 475 aaKnown RBP11.55□□□□□ -0.56
RNF4-212ENST00000509258 YWHAQP27348 245 aa11.55□□□□□ -0.56
RNF4-212ENST00000509258 ADORA2BP29275 332 aa11.55□□□□□ -0.56
RNF4-212ENST00000509258 SLC6A11P48066 632 aa11.55□□□□□ -0.56
RNF4-212ENST00000509258 DGKEP52429 567 aa11.55□□□□□ -0.56
RNF4-212ENST00000509258 MAP3K7CLP57077 242 aa11.55□□□□□ -0.56
RNF4-212ENST00000509258 INCA1Q0VD86 236 aa11.55□□□□□ -0.56
RNF4-212ENST00000509258 ADAM9Q13443 819 aa11.55□□□□□ -0.56
RNF4-212ENST00000509258 SGSM1Q2NKQ1 1148 aa11.55□□□□□ -0.56
RNF4-212ENST00000509258 USP39Q53GS9 565 aaKnown RBP11.55□□□□□ -0.56
RNF4-212ENST00000509258 CRYBG2Q8N1P7 616 aa11.55□□□□□ -0.56
RNF4-212ENST00000509258 FBXO32Q969P5 355 aa11.55□□□□□ -0.56
RNF4-212ENST00000509258 JAKMIP2Q96AA8 810 aa11.55□□□□□ -0.56
RNF4-212ENST00000509258 P2RY11Q96G91 374 aa11.55□□□□□ -0.56
RNF4-212ENST00000509258 SMARCD1Q96GM5 515 aa11.55□□□□□ -0.56
RNF4-212ENST00000509258 DMAP1Q9NPF5 467 aaPredicted RBP11.55□□□□□ -0.56
RNF4-212ENST00000509258 CFAP97Q9P2B7 532 aa11.55□□□□□ -0.56
RNF4-212ENST00000509258 FRMD4BQ9Y2L6 1034 aa11.55□□□□□ -0.56
RNF4-212ENST00000509258 LNP1A1A4G5 178 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 FAM92AA1XBS5 289 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 DCLK1O15075 740 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 GADD45BO75293 160 aaPredicted RBP11.54□□□□□ -0.56
RNF4-212ENST00000509258 CILPO75339 1184 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 KCNK5O95279 499 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 TBX18O95935 607 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 HNRNPLP14866 589 aaKnown RBP eCLIP11.54□□□□□ -0.56
RNF4-212ENST00000509258 CD58P19256 250 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 BMP6P22004 513 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 PSMC2P35998 433 aaKnown RBP11.54□□□□□ -0.56
RNF4-212ENST00000509258 PREPLQ4J6C6 727 aaPredicted RBP11.54□□□□□ -0.56
RNF4-212ENST00000509258 CBWD6Q4V339 395 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 CBWD3Q5JTY5 395 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 CBWD5Q5RIA9 395 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 PMS2CLQ68D20 193 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 ANKRD40Q6AI12 368 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 ISM2Q6H9L7 571 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 ANO7Q6IWH7 933 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 PSAPL1Q6NUJ1 521 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 CLEC20AQ6ZU45 233 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 RASSF3Q86WH2 238 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 ZC3H3Q8IXZ2 948 aaKnown RBP11.54□□□□□ -0.56
RNF4-212ENST00000509258 PDZD8Q8NEN9 1154 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 SPATA20Q8TB22 786 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 USP33Q8TEY7 942 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 TAF4BQ92750 862 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 TATDN2Q93075 761 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 CNOT6LQ96LI5 555 aaKnown RBP11.54□□□□□ -0.56
RNF4-212ENST00000509258 NMUR1Q9HB89 426 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 CSNK1G1Q9HCP0 422 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 ZDHHC4Q9NPG8 344 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 PCDHA5Q9Y5H7 936 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 ATP6V1DQ9Y5K8 247 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 CFAP47Q6ZTR5 3102 aa11.54□□□□□ -0.56
RNF4-212ENST00000509258 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.53□□□□□ -0.56
RNF4-212ENST00000509258 K7EQS6 105 aa11.53□□□□□ -0.56
RNF4-212ENST00000509258 MDM4O15151 490 aa11.53□□□□□ -0.56
RNF4-212ENST00000509258 CYP26A1O43174 497 aa11.53□□□□□ -0.56
RNF4-212ENST00000509258 GREM1O60565 184 aa11.53□□□□□ -0.56
RNF4-212ENST00000509258 ALDH1A2O94788 518 aa11.53□□□□□ -0.56
RNF4-212ENST00000509258 RTN3O95197 1032 aaPredicted RBP11.53□□□□□ -0.56
RNF4-212ENST00000509258 MBL2P11226 248 aaPredicted RBP11.53□□□□□ -0.56
RNF4-212ENST00000509258 SEC13P55735 322 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms